Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4499
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY874862-1|AAX59898.1|  424|Homo sapiens SH3-binding kinase prot...    32   2.3  
Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein.          31   5.3  
AC018730-1|AAX88973.1|  500|Homo sapiens unknown protein.              31   5.3  
AB001835-1|BAA19459.1|  500|Homo sapiens Brain-1 protein.              31   5.3  
U93867-1|AAB63675.1|  533|Homo sapiens RNA polymerase III subuni...    30   9.3  
AB062450-1|BAB85632.1|  302|Homo sapiens NEK7 protein.                 30   9.3  

>AY874862-1|AAX59898.1|  424|Homo sapiens SH3-binding kinase
           protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -3

Query: 188 P*DTMRRCHRSKFSALPSLIGRRLRHYSLRPQRILL 81
           P DT++RC +    AL  + GR+L H  ++P+ +LL
Sbjct: 147 PEDTVKRCVQQLGLALDFMHGRQLVHRDIKPENVLL 182


>Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein.
          Length = 4005

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +1

Query: 445 SR*EEEVEATPAH-TGTPATEDPVPHPRLPRNHCLCRRQGSYVS*SSALGFRFNTPQETA 621
           S+  EE++  P   + TP    P+P  + P N    RR   Y     + G R  T + + 
Sbjct: 523 SQASEEIQVLPEERSDTPEVHPPLPISQSPENESNDRRSRRYSVSERSFGSR-TTKKLST 581

Query: 622 FQKRPSREL*GRGASPP*RALQP 690
            Q  P +E     +SPP   L P
Sbjct: 582 LQSAPQQE---TSSSPPPPLLTP 601


>AC018730-1|AAX88973.1|  500|Homo sapiens unknown protein.
          Length = 500

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 635 HHESYEVVAHPHHEEHFSHSTGGGG 709
           HH ++    HPHH +   H  GGGG
Sbjct: 275 HHHAHPHPPHPHHAQGPPHHGGGGG 299


>AB001835-1|BAA19459.1|  500|Homo sapiens Brain-1 protein.
          Length = 500

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 635 HHESYEVVAHPHHEEHFSHSTGGGG 709
           HH ++    HPHH +   H  GGGG
Sbjct: 275 HHHAHPHPPHPHHAQGPPHHGGGGG 299


>U93867-1|AAB63675.1|  533|Homo sapiens RNA polymerase III subunit
           protein.
          Length = 533

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 215 VSNSRELNLIDGVSLIGQGSPRSARSFEPLPDEPRARENQV 337
           V N +++ L+  +SLIG+G  R + S E    EP+AR+  +
Sbjct: 181 VINEKDMYLVPKLSLIGKGKRRRS-SDEDAAGEPKARDQNI 220


>AB062450-1|BAB85632.1|  302|Homo sapiens NEK7 protein.
          Length = 302

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -3

Query: 218 RHFPRIAKLFP*DTMRRCHRSKFSALPSLIGRRLRHYSLRPQRILLTPPG 69
           +HF +  +L P  T+ +      SAL  +  RR+ H  ++P  + +T  G
Sbjct: 124 KHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG 173


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,787,852
Number of Sequences: 237096
Number of extensions: 2242974
Number of successful extensions: 10239
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10229
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)