Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4494
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0193 - 15492102-15492746,15492833-15492946,15493042-154933...    30   1.7  
03_06_0109 - 31717691-31718311,31719110-31719223,31719316-317196...    29   2.3  
07_01_0184 - 1304328-1304951,1305328-1305441,1305549-1305839,130...    29   3.0  
05_06_0038 - 25100851-25101474,25101945-25102058,25102151-251024...    29   3.0  
01_06_0835 - 32312264-32312884,32313529-32313642,32313739-323140...    29   3.0  
02_05_0305 + 27727991-27728473,27730785-27731237                       27   9.3  
02_02_0728 + 13416481-13416889,13416979-13417065,13417220-134173...    27   9.3  

>09_04_0193 -
           15492102-15492746,15492833-15492946,15493042-15493332,
           15493412-15493720,15493815-15494552
          Length = 698

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 431 YREAVMRFGLKGGGLKGENRCNYTEILELIS 523
           YR  V+R G K G LK    C+Y +  E ++
Sbjct: 298 YRHRVLRTGYKAGNLKSAMSCDYVKDYEFVA 328


>03_06_0109 -
           31717691-31718311,31719110-31719223,31719316-31719606,
           31719698-31720006,31720098-31720865
          Length = 700

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 431 YREAVMRFGLKGGGLKGENRCNYTEILELIS 523
           YR  V+R G K G LK    C+Y +  E ++
Sbjct: 308 YRHRVLRDGYKAGNLKSAMSCSYVKDYEFVA 338


>07_01_0184 -
           1304328-1304951,1305328-1305441,1305549-1305839,
           1305930-1306238,1306326-1307048
          Length = 686

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 431 YREAVMRFGLKGGGLKGENRCNYTEILELIS 523
           YR  V+R G K G LK    C+Y +  E ++
Sbjct: 293 YRHRVLREGYKAGNLKSAMSCSYVKDYEYVA 323


>05_06_0038 -
           25100851-25101474,25101945-25102058,25102151-25102441,
           25102552-25102860,25103458-25104186
          Length = 688

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 431 YREAVMRFGLKGGGLKGENRCNYTEILELI 520
           YR  V+R G K G LK    C+Y +  E +
Sbjct: 295 YRHRVIRDGYKAGNLKSAMNCSYVKDYEFV 324


>01_06_0835 -
           32312264-32312884,32313529-32313642,32313739-32314029,
           32314135-32314443,32315194-32315931
          Length = 690

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 431 YREAVMRFGLKGGGLKGENRCNYTEILELI 520
           YR  V+R G K G LK    C+Y +  E +
Sbjct: 298 YRHRVIRDGYKAGNLKSAMNCSYVKDYEFV 327


>02_05_0305 + 27727991-27728473,27730785-27731237
          Length = 311

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 133 VQNYRNYVLPN*FTQFSWKHFTID 62
           ++ YR+Y+ PN    FSWK+FT++
Sbjct: 244 LEMYRDYIDPN----FSWKNFTLE 263


>02_02_0728 +
           13416481-13416889,13416979-13417065,13417220-13417351,
           13417474-13417539,13417754-13418919
          Length = 619

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 630 FFFFFLLXRWVDELTAQLSGYW 565
           FFFFF L  W+D  T +L+ ++
Sbjct: 60  FFFFFFLDPWIDGNTKRLTRFF 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,056,018
Number of Sequences: 37544
Number of extensions: 206919
Number of successful extensions: 363
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)