Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4489
(616 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0759 + 5838726-5838879,5839654-5839778,5840168-5840264,584... 57 1e-08
03_06_0688 - 35559239-35559433,35560455-35560792,35561357-355617... 56 3e-08
01_06_0169 - 27172182-27172361,27172552-27172889,27172983-271734... 51 8e-07
05_07_0137 + 27955876-27956000,27957626-27957714,27957963-279580... 48 6e-06
01_05_0779 + 25128320-25128518,25129048-25129141,25129867-251300... 45 6e-05
05_02_0085 - 6465126-6466049 44 7e-05
06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797 30 1.3
03_05_0760 - 27505860-27506148,27507647-27508580,27508677-275087... 29 2.2
02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837 29 2.2
01_06_0799 - 32072656-32072841,32072846-32072950,32073726-320738... 29 2.2
11_07_0002 - 27171791-27172222 29 2.9
09_02_0279 + 6702517-6702948 29 2.9
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 29 2.9
02_01_0302 - 2021221-2023305 29 2.9
11_06_0118 + 20308921-20309204,20310559-20310700 28 5.1
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 28 5.1
03_06_0744 + 35910512-35910569,35911145-35911325,35912332-359124... 28 5.1
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183... 28 6.8
03_05_0168 - 21466431-21466445,21467053-21467160,21467222-214673... 28 6.8
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 28 6.8
01_03_0068 - 12188426-12188767 28 6.8
01_01_0570 - 4231100-4232560 28 6.8
12_02_1190 - 26814289-26814438,26814526-26814718,26814998-268152... 27 8.9
03_02_0342 - 7645323-7645909,7646323-7646491 27 8.9
02_05_0115 - 25965275-25965517,25965806-25965961,25966103-259661... 27 8.9
02_04_0086 + 19610899-19610992,19613399-19613652,19613744-196139... 27 8.9
>07_01_0759 +
5838726-5838879,5839654-5839778,5840168-5840264,
5840948-5841421,5842017-5842354,5843039-5843197,
5843273-5843311
Length = 461
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +1
Query: 385 RPLLPPVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKKAHVD 564
RP+L P + + P +V+DLDETLVHS+ +P +ADF PV + H +YV + ++
Sbjct: 262 RPVLLPKQTRSCPTTTLVLDLDETLVHSTLEPCEDADFAFPVYFNFREHTIYVRCRPYLK 321
Query: 565 KFL 573
+FL
Sbjct: 322 EFL 324
>03_06_0688 -
35559239-35559433,35560455-35560792,35561357-35561785,
35562014-35562110,35562314-35562438,35562758-35562908
Length = 444
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/63 (38%), Positives = 41/63 (65%)
Frame = +1
Query: 385 RPLLPPVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKKAHVD 564
+P+L P + + P+ +V+DLDETLVHS+ +P ++DF PV + H +YV + ++
Sbjct: 246 QPVLLPKQTRSCPRTTLVLDLDETLVHSTLEPCEDSDFTFPVHFNLREHTIYVRCRPYLK 305
Query: 565 KFL 573
+FL
Sbjct: 306 EFL 308
>01_06_0169 -
27172182-27172361,27172552-27172889,27172983-27173426,
27174731-27174836,27175401-27175495,27175802-27175958
Length = 439
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = +1
Query: 406 RHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKKAHVDKFL 573
+ Q K +V+DLDETLVHS+ + ++ DF PV D H VYV K+ H+ FL
Sbjct: 253 KEQGARKVTLVLDLDETLVHSTTEQCDDYDFTFPVFFDMKEHMVYVRKRPHLHMFL 308
>05_07_0137 +
27955876-27956000,27957626-27957714,27957963-27958054,
27959338-27959419,27960038-27960454,27960539-27960876,
27961066-27961233
Length = 436
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 379 APRPLLPPVRHQDMPKK--CMVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKK 552
A P + P P+K +V+DLDETL+HSS + ADF P+ H VYV K+
Sbjct: 243 ADLPDIYPDSFLPTPRKNITLVLDLDETLIHSSAVDRDGADFSFPMYHGLKEHTVYVKKR 302
Query: 553 AHVDKFL 573
HVD FL
Sbjct: 303 PHVDTFL 309
>01_05_0779 +
25128320-25128518,25129048-25129141,25129867-25130078,
25130924-25131054,25131933-25132041,25132180-25132659,
25133194-25133531,25133810-25133977
Length = 576
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 433 MVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKKAHVDKFL 573
+V+DLDETLVHS+ +N DF + V + H VYV ++ H+ FL
Sbjct: 403 LVLDLDETLVHSTLDHCDNVDFTLQVFFNMKNHTVYVRQRPHLKMFL 449
>05_02_0085 - 6465126-6466049
Length = 307
Score = 44.4 bits (100), Expect = 7e-05
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 367 MSEHAPRPLLPPVRHQDMPKKCMVIDLDETLVHSSFKPINNA--DFVVPVEIDGAVH*VY 540
+S P PL PPV ++ + +DLDETL+HS P A DF V I G Y
Sbjct: 114 VSPQLPLPL-PPV---SPGRRTLFLDLDETLIHSQTDPAARARHDFAVRPVIAGQAVTFY 169
Query: 541 VLKKAHVDKFLPAGRRALPM 600
V+K+ VD FL A A +
Sbjct: 170 VVKRPGVDAFLAAAAAAFEL 189
>06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797
Length = 216
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 257 PPVPLDFFPPKGVDPETGVPSPSLCCTPGDEPLS 156
PP P +PP P P P +PGD P S
Sbjct: 51 PPPPYCVYPPPPTKPALPAPLPPTPASPGDSPPS 84
>03_05_0760 -
27505860-27506148,27507647-27508580,27508677-27508792,
27508876-27508945,27509027-27509183
Length = 521
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 346 ASPPLLVMSEHAPR--PLLPPVRHQDMPKKCMVIDLD 450
+SPP +++ E PR P +P + D P +C V L+
Sbjct: 147 SSPPSVIVREAKPRRSPSVPSLEEDDSPVQCRVTSLE 183
>02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837
Length = 222
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -2
Query: 324 AIASGRSLAS--ATAPTAQQRSQEAAGPAR 241
A AS LAS ATAPTA+ RS +A PAR
Sbjct: 2 ATASSLFLASPVATAPTARARSTPSASPAR 31
>01_06_0799 -
32072656-32072841,32072846-32072950,32073726-32073839,
32073935-32073996,32074709-32074745,32075091-32075179,
32075331-32075604
Length = 288
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 370 SEHAPRPLLPPVRHQDMPKKCMVIDLDETLVHSSFK 477
SE + LLP + Q+ +V+DL+ETLV+S +K
Sbjct: 157 SEPSSDKLLPDLLPQEQHVFTLVLDLNETLVYSDWK 192
>11_07_0002 - 27171791-27172222
Length = 143
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 160 RGSSPGVQHNEGDGTPVSGSTPLGGKKSSGTGG 258
RGS G + G G SGSTP+GG +S GG
Sbjct: 74 RGSPAGAGGSPGGG---SGSTPVGGGRSFAGGG 103
>09_02_0279 + 6702517-6702948
Length = 143
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 160 RGSSPGVQHNEGDGTPVSGSTPLGGKKSSGTGG 258
RGS G + G G SGSTP+GG +S GG
Sbjct: 74 RGSPAGAGGSPGGG---SGSTPVGGGRSFAGGG 103
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 124 GDDEQLNNYGPDRGSSPGVQHNEGDGTPVSGSTPLGGKKSSGTGG 258
GDDE ++YG RG G GDG G G G GG
Sbjct: 150 GDDEGRSSYGRARGGGGGGGGYHGDGEAGYGRGRGGRDYDGGRGG 194
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = +1
Query: 154 PDRGSSPGVQHNEGDGTPVSGSTPLGGK 237
P GSS G H G G P S STP GGK
Sbjct: 647 PSHGSSTGGGH--GGGHPPSTSTPPGGK 672
>11_06_0118 + 20308921-20309204,20310559-20310700
Length = 141
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = -3
Query: 380 ACSDMTSKGGEALPSILLVXXXXXXXXXXXXRQQHSNDR-KKPPVPLDFFPPKGVDPETG 204
AC+ T+ G A P + + S D PP PL PP+G P +
Sbjct: 5 ACAASTTSVGPAHPRVSADSRGPARLRRLRVIPRASADSVAAPPAPL---PPRGQAPRSP 61
Query: 203 VPSPSLCCTPGDEPLSGP*LFNC 135
+ ++ + E +SGP F C
Sbjct: 62 LLRVAIPASTAAEAVSGPVWFGC 84
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 254 PVPLDFFPPKGVDPETGVPSPSLCCTPG-DEPLSG 153
P PLD P KG DPE P L P DEP SG
Sbjct: 330 PSPLDLPPMKGTDPED--PELILERKPSDDEPFSG 362
>03_06_0744 +
35910512-35910569,35911145-35911325,35912332-35912419,
35912541-35912726,35913591-35913725,35913803-35913862,
35914609-35914698,35915384-35915515,35916039-35916183,
35916266-35916439,35916629-35916692,35916778-35916847,
35917328-35917445,35918258-35918280,35918398-35918499,
35919831-35920250,35920327-35920563
Length = 760
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 127 DDEQLNNYGPDRGSSPGVQHNEGDGTPVSGSTPLGGKKSSGTGGFLR 267
D Q+ ++G D G G P P GGK+ TG F R
Sbjct: 34 DLAQMFSHGADSAHDAGAVSTGASGVPTRFVWPYGGKRVYLTGSFTR 80
>08_02_0113 - 12715888-12716181,12717443-12717602,12718327-12718368,
12718443-12718465,12718616-12720653,12720736-12720965,
12722207-12722329,12722438-12723010,12724684-12724733,
12726828-12726923,12726987-12727394,12727609-12727795
Length = 1407
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 299 ARDLPEAMAPIVSTAGLLRPCWSCLNMPPDLCY 397
A LP A + LLR CW CL+ + CY
Sbjct: 1221 AEQLPAQSAWSGNYLDLLRICWECLSWKHNKCY 1253
>03_05_0168 -
21466431-21466445,21467053-21467160,21467222-21467365,
21467778-21467846,21467928-21468071,21468409-21468565,
21468671-21468767,21469015-21469297,21469382-21469507,
21470098-21470178,21471990-21472072,21472393-21472478,
21473329-21473422,21473516-21473681,21473777-21473851,
21474082-21474157,21474259-21474347
Length = 630
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 278 HSNDRKKPPVPLDFFPP 228
H+N +KPP+ +DF PP
Sbjct: 401 HANGVEKPPIEIDFTPP 417
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = -2
Query: 390 RSGGMFRHDQQGRRSPAVDTIGAIASGRSLASATAPTAQQRSQEAAGPARFLPTQRGRPR 211
+ GG H+++ + + + A+ S ++ATAP+ Q + G R + RG+
Sbjct: 363 KGGGNAGHERKSKGGKSAAAACSTAASASSSTATAPSKQSQKGGGGGGGRG-GSWRGQKS 421
Query: 210 NWGA 199
W A
Sbjct: 422 GWEA 425
>01_03_0068 - 12188426-12188767
Length = 113
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 154 PDRGSSPGVQHNEGDGTPVSGSTPLGGKKSSGTGGFLR 267
P RGS ++ G G+P GS+ GG+ S G G R
Sbjct: 16 PPRGSGDRLELEAGGGSPPYGSS--GGRHSGGRRGLWR 51
>01_01_0570 - 4231100-4232560
Length = 486
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 151 GPDRGSSPGVQHNEGDGTPVSGSTPLGGKKSSGTGGF 261
G G++ G+ G G + GS LGG G+GGF
Sbjct: 78 GTGGGAAGGLGGGGGGGGGLGGSGGLGGGGMGGSGGF 114
>12_02_1190 -
26814289-26814438,26814526-26814718,26814998-26815233,
26815363-26815535,26815651-26815701,26816686-26817079
Length = 398
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 372 RHDQQGRRSPAVDTIGAIASGRSLASATAPTAQQRSQEAAGPA 244
RH ++GRR V + SLA ATAP A + AA A
Sbjct: 31 RHQRRGRRPVVVASSVRPLQAASLAVATAPVAVASRRTAAEEA 73
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 257 PPVPLDFFPPKGVDPETGVPSPSLCCTPGDEPLSGP 150
PP P PP+ PE P+P+L P EP GP
Sbjct: 174 PPPP----PPRPPAPEYKPPTPTLTPIPTPEPSYGP 205
>02_05_0115 -
25965275-25965517,25965806-25965961,25966103-25966128,
25966177-25966289,25966428-25966541,25968328-25968461,
25968565-25969083
Length = 434
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 334 IDGRASPPLLVMSEHAPRPLLPPVRHQDMPKKCMVIDLDETLVHSSFKPINN 489
I + +PP M A LP V + K + D++ET+ HS+ K N
Sbjct: 43 IVAKPNPPPAAMQVKAQAQTLPKVNGTKVNLKTVKPDMEETVPHSAPKTFYN 94
>02_04_0086 +
19610899-19610992,19613399-19613652,19613744-19613955,
19614059-19614320,19614432-19614728
Length = 372
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 200 PSPSLCCTPGDEPLSGP 150
P P +C TPG P++GP
Sbjct: 56 PVPKICGTPGGPPVTGP 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,855,634
Number of Sequences: 37544
Number of extensions: 478388
Number of successful extensions: 1681
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1678
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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