Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4489
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83316-9|CAN99655.1| 250|Caenorhabditis elegans Hypothetical pr... 101 4e-22
Z83316-6|CAD30429.2| 491|Caenorhabditis elegans Hypothetical pr... 101 4e-22
Z83316-5|CAD30428.2| 345|Caenorhabditis elegans Hypothetical pr... 101 4e-22
AC006780-5|AAF60646.1| 287|Caenorhabditis elegans Hypothetical ... 54 8e-08
AC006780-4|AAO21411.1| 312|Caenorhabditis elegans Hypothetical ... 54 8e-08
U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical ... 29 2.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.5
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 29 3.5
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 29 3.5
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 29 3.5
Z81532-3|CAC70088.2| 659|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 6.1
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 6.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 6.1
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 6.1
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 6.1
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 28 6.1
Z83231-4|CAB05752.1| 356|Caenorhabditis elegans Hypothetical pr... 27 8.1
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 27 8.1
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein. 27 8.1
AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein. 27 8.1
>Z83316-9|CAN99655.1| 250|Caenorhabditis elegans Hypothetical
protein B0379.4c protein.
Length = 250
Score = 101 bits (242), Expect = 4e-22
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +1
Query: 385 RPLLPPVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKKAHVD 564
+PLLPP+ QD KKC+VIDLDETLVHSSFKP+ N DFV+PVEIDG H VYVLK+ +VD
Sbjct: 57 KPLLPPLLPQDSNKKCLVIDLDETLVHSSFKPVKNPDFVIPVEIDGVEHQVYVLKRPYVD 116
Query: 565 KFL 573
+FL
Sbjct: 117 EFL 119
>Z83316-6|CAD30429.2| 491|Caenorhabditis elegans Hypothetical
protein B0379.4b protein.
Length = 491
Score = 101 bits (242), Expect = 4e-22
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +1
Query: 385 RPLLPPVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKKAHVD 564
+PLLPP+ QD KKC+VIDLDETLVHSSFKP+ N DFV+PVEIDG H VYVLK+ +VD
Sbjct: 298 KPLLPPLLPQDSNKKCLVIDLDETLVHSSFKPVKNPDFVIPVEIDGVEHQVYVLKRPYVD 357
Query: 565 KFL 573
+FL
Sbjct: 358 EFL 360
>Z83316-5|CAD30428.2| 345|Caenorhabditis elegans Hypothetical
protein B0379.4a protein.
Length = 345
Score = 101 bits (242), Expect = 4e-22
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +1
Query: 385 RPLLPPVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKKAHVD 564
+PLLPP+ QD KKC+VIDLDETLVHSSFKP+ N DFV+PVEIDG H VYVLK+ +VD
Sbjct: 152 KPLLPPLLPQDSNKKCLVIDLDETLVHSSFKPVKNPDFVIPVEIDGVEHQVYVLKRPYVD 211
Query: 565 KFL 573
+FL
Sbjct: 212 EFL 214
>AC006780-5|AAF60646.1| 287|Caenorhabditis elegans Hypothetical
protein Y47D9A.2a protein.
Length = 287
Score = 54.0 bits (124), Expect = 8e-08
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +1
Query: 400 PVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKKAHVDKFL 573
PV+ + P+ +V+DLDETLVH S P++NA V PV + VYV + H+ FL
Sbjct: 56 PVKTRSTPEYTLVLDLDETLVHCSLTPLDNATMVFPVVFQNITYQVYVRLRPHLRTFL 113
>AC006780-4|AAO21411.1| 312|Caenorhabditis elegans Hypothetical
protein Y47D9A.2b protein.
Length = 312
Score = 54.0 bits (124), Expect = 8e-08
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +1
Query: 400 PVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDGAVH*VYVLKKAHVDKFL 573
PV+ + P+ +V+DLDETLVH S P++NA V PV + VYV + H+ FL
Sbjct: 56 PVKTRSTPEYTLVLDLDETLVHCSLTPLDNATMVFPVVFQNITYQVYVRLRPHLRTFL 113
>U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical
protein F45E12.1 protein.
Length = 246
Score = 40.7 bits (91), Expect = 8e-04
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Frame = +1
Query: 364 VMSEHAPRPLLPPVRHQ--DMPKKCMVIDLDETLVHS--------SFKPINNADFVVPVE 513
V+ H+ P+ P H+ + +K +V+DLDETL+HS + KP +DF + V
Sbjct: 35 VVKYHSNIPMSPLTTHRLLTVKRKILVLDLDETLIHSHHDGVLRQTVKPGTPSDFTIRVV 94
Query: 514 IDGAVH*VYVLKKAHVDKFL 573
ID V ++ HVD FL
Sbjct: 95 IDRHPVKFSVHERPHVDYFL 114
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 124 GDDEQLNNYGPDRGSSPGVQ-HNEGDGTPVSGSTPLGGKKSSGTGGF 261
G D+ P PG + +G G GS P G + G GGF
Sbjct: 48 GHDQAQQPQNPYAPPPPGADPYGQGSGGQSGGSDPYGQSRGGGRGGF 94
>AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical
protein K09F6.10 protein.
Length = 480
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 554 RMSTSFCRRGGELYQCGFVHR 616
++S SFC R + +CGF+HR
Sbjct: 391 KLSLSFCERYEKCKKCGFIHR 411
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 257 PPVPLDFFPPKGVDPETGVPSPSLCCTPGDEPLSGP 150
PP P F PP + P P P + C P P+ P
Sbjct: 58 PPCPAQFCPPPPICPPP--PPPPMPCPPPPPPMPRP 91
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 127 DDEQLNNYGPDRGSSPGVQHNEGDGTPVSGSTPLGGKKSSGTG 255
+D + P G GD TPV +TP+ K SG G
Sbjct: 500 EDTTITKVSPQPQERTGTAWGSGDATPVPLATPVNEYKVSGFG 542
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 127 DDEQLNNYGPDRGSSPGVQHNEGDGTPVSGSTPLGGKKSSGTG 255
+D + P G GD TPV +TP+ K SG G
Sbjct: 565 EDTTITKVSPQPQERTGTAWGSGDATPVPLATPVNEYKVSGFG 607
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 127 DDEQLNNYGPDRGSSPGVQHNEGDGTPVSGSTPLGGKKSSGTG 255
+D + P G GD TPV +TP+ K SG G
Sbjct: 565 EDTTITKVSPQPQERTGTAWGSGDATPVPLATPVNEYKVSGFG 607
>Z81532-3|CAC70088.2| 659|Caenorhabditis elegans Hypothetical
protein F36F2.6 protein.
Length = 659
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +1
Query: 424 KKCMVIDLDETLVHSSFKPI 483
K +++DLD+T++H+S KP+
Sbjct: 143 KLVLLVDLDQTIIHTSDKPM 162
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 400 PVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDG 522
P+RH+D+ K+ +V+ DE L PI N +VV + DG
Sbjct: 3135 PLRHKDITKESVVLKWDEPL-DDGGSPITN--YVVEKQEDG 3172
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 400 PVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDG 522
P+RH+D+ K+ +V+ DE L PI N +VV + DG
Sbjct: 3664 PLRHKDITKESVVLKWDEPL-DDGGSPITN--YVVEKQEDG 3701
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 400 PVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDG 522
P+RH+D+ K+ +V+ DE L PI N +VV + DG
Sbjct: 3345 PLRHKDITKESVVLKWDEPL-DDGGSPITN--YVVEKQEDG 3382
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 400 PVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDG 522
P+RH+D+ K+ +V+ DE L PI N +VV + DG
Sbjct: 3135 PLRHKDITKESVVLKWDEPL-DDGGSPITN--YVVEKQEDG 3172
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 400 PVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDG 522
P+RH+D+ K+ +V+ DE L PI N +VV + DG
Sbjct: 3664 PLRHKDITKESVVLKWDEPL-DDGGSPITN--YVVEKQEDG 3701
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 400 PVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDG 522
P+RH+D+ K+ +V+ DE L PI N +VV + DG
Sbjct: 3345 PLRHKDITKESVVLKWDEPL-DDGGSPITN--YVVEKQEDG 3382
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 400 PVRHQDMPKKCMVIDLDETLVHSSFKPINNADFVVPVEIDG 522
P+RH+D+ K+ +V+ DE L PI N +VV + DG
Sbjct: 2554 PLRHKDITKESVVLKWDEPL-DDGGSPITN--YVVEKQEDG 2591
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 263 KKPPVPLDFFPPKGVDPETGVPSPSLCCTPGDEPL 159
KKPP+P + D ETG S +L T PL
Sbjct: 1578 KKPPIPPPNIRDRERDRETGTSSSALPTTTASNPL 1612
>Z83231-4|CAB05752.1| 356|Caenorhabditis elegans Hypothetical
protein F57G9.4 protein.
Length = 356
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +2
Query: 218 RPLWVGRNLAGPAASCDRCCAVGAVAEARDL-PEAMAPIVSTAGLLRPCWSCL 373
R L++G L SC C +G A DL P V L P SCL
Sbjct: 243 RALYLGTRLVFVVLSCIALCGIGITALFYDLIPPFCCHFVENFLFLHPYLSCL 295
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 112 LRCHGDDEQLNNYGPDRGSSPGVQHNEGDGTPVSGSTPLGGKKSSG 249
L C DD N P N G G P++G+T + +++G
Sbjct: 547 LNCSFDDTACNYLNHGLTKKPWTLRNRGYGYPLTGTTDIRATQTNG 592
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein
F30H5.3 protein.
Length = 1599
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 230 PKGVDPETGVPSPSLCCTPGDEPLSGP 150
P G + + LCCT DEP+ GP
Sbjct: 1180 PSGYSCQRAISGAQLCCTTNDEPV-GP 1205
>AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein.
Length = 553
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 352 PPLLV-MSEHAPRPLLPPVRHQDMPKKCMVIDLDETLVHSSFKPINN 489
PPL+V M + + PL PV H + +++ L HSS + INN
Sbjct: 481 PPLVVEMFQLSTLPL--PVNHNNQENHILLLQSIRALNHSSQRQINN 525
>AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein.
Length = 556
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 352 PPLLV-MSEHAPRPLLPPVRHQDMPKKCMVIDLDETLVHSSFKPINN 489
PPL+V M + + PL PV H + +++ L HSS + INN
Sbjct: 484 PPLVVEMFQLSTLPL--PVNHNNQENHILLLQSIRALNHSSQRQINN 528
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,841,929
Number of Sequences: 27780
Number of extensions: 373736
Number of successful extensions: 1004
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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