Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4488
         (522 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y15247-1|CAA75531.1| 1121|Drosophila melanogaster chromatin asso...    28   6.7  
Y10667-1|CAA71675.1| 1121|Drosophila melanogaster Kinesin-like p...    28   6.7  
X99617-1|CAA67928.1| 1121|Drosophila melanogaster kinesin-like p...    28   6.7  
AY052090-1|AAK93514.1| 1013|Drosophila melanogaster SD04054p pro...    28   6.7  
AF022650-1|AAB81511.1| 1121|Drosophila melanogaster kinesin like...    28   6.7  
AE014134-3199|AAF53872.1| 1121|Drosophila melanogaster CG10718-P...    28   6.7  

>Y15247-1|CAA75531.1| 1121|Drosophila melanogaster chromatin
           associated kinesin relatedprotein (KLP38B) protein.
          Length = 1121

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -2

Query: 485 FVVSIEEHS----EVCKQILFKGSAARGSASR-VNDKNSENENAFNIVM 354
           +VV +  HS       +  L  G++ R +AS  +NDK+S + + FNIV+
Sbjct: 327 YVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVL 375


>Y10667-1|CAA71675.1| 1121|Drosophila melanogaster Kinesin-like
           protein, KLP38B protein.
          Length = 1121

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -2

Query: 485 FVVSIEEHS----EVCKQILFKGSAARGSASR-VNDKNSENENAFNIVM 354
           +VV +  HS       +  L  G++ R +AS  +NDK+S + + FNIV+
Sbjct: 327 YVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVL 375


>X99617-1|CAA67928.1| 1121|Drosophila melanogaster kinesin-like
           protein protein.
          Length = 1121

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -2

Query: 485 FVVSIEEHS----EVCKQILFKGSAARGSASR-VNDKNSENENAFNIVM 354
           +VV +  HS       +  L  G++ R +AS  +NDK+S + + FNIV+
Sbjct: 327 YVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVL 375


>AY052090-1|AAK93514.1| 1013|Drosophila melanogaster SD04054p
           protein.
          Length = 1013

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -2

Query: 485 FVVSIEEHS----EVCKQILFKGSAARGSASR-VNDKNSENENAFNIVM 354
           +VV +  HS       +  L  G++ R +AS  +NDK+S + + FNIV+
Sbjct: 219 YVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVL 267


>AF022650-1|AAB81511.1| 1121|Drosophila melanogaster kinesin like
           protein at 38B protein.
          Length = 1121

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -2

Query: 485 FVVSIEEHS----EVCKQILFKGSAARGSASR-VNDKNSENENAFNIVM 354
           +VV +  HS       +  L  G++ R +AS  +NDK+S + + FNIV+
Sbjct: 327 YVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVL 375


>AE014134-3199|AAF53872.1| 1121|Drosophila melanogaster CG10718-PA
           protein.
          Length = 1121

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -2

Query: 485 FVVSIEEHS----EVCKQILFKGSAARGSASR-VNDKNSENENAFNIVM 354
           +VV +  HS       +  L  G++ R +AS  +NDK+S + + FNIV+
Sbjct: 327 YVVDLSAHSVDSYSALRNWLAVGNSQRATASTAMNDKSSRSHSIFNIVL 375


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,580,477
Number of Sequences: 53049
Number of extensions: 308256
Number of successful extensions: 905
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)