Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4487
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   7.2  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 337 ICCSNLQKYVIVLDCHNQGRYVT 405
           +C  +L +Y+ + D    GR+VT
Sbjct: 116 LCAISLDRYIHIKDPLRYGRWVT 138


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -2

Query: 224 KLFNVHVSSNLYSVRE*LMIPHS*HTTRRPEI*FPQRPQRRHEFSVKVHPH 72
           K +     S  +SV+E L +    HT  RP        +R  E S K+H H
Sbjct: 118 KPYQCEYCSKSFSVKENLSVHRRIHTKERPY--KCDVCERAFEHSGKLHRH 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,608
Number of Sequences: 438
Number of extensions: 4313
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)