Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4473
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
           protein T07D4.3 protein.
          Length = 1301

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -1

Query: 505 IEK*EIGKARKTIIRKLHSTILFPLQFTIFKGFIGARKILGDCNI 371
           +E  E G+A K  I  LHS +    Q  +F  + G RKI+   NI
Sbjct: 680 LEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYPGKRKIIVSTNI 724


>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
           protein B0496.3b protein.
          Length = 1592

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 667 IDLIDRGLIQTQS**KYSHLLV 732
           +D  DRGLI+ QS  KY H L+
Sbjct: 778 LDAFDRGLIKRQSKGKYQHTLI 799


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,339,571
Number of Sequences: 27780
Number of extensions: 315284
Number of successful extensions: 649
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)