Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4473
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    25   0.99 
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      25   0.99 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.2  

>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 568 HLVKYELICFTLIPLCLPSKC 630
           HL+   L  F +I L +PSKC
Sbjct: 10  HLITVLLFSFVVILLIIPSKC 30


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 568 HLVKYELICFTLIPLCLPSKC 630
           HL+   L  F +I L +PSKC
Sbjct: 10  HLITVLLFSFVVILLIIPSKC 30


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 529 IALDSSKLSRFDFHLVKYELICFTLIPLC 615
           +A+ S+  +R +  L +YE  CF L   C
Sbjct: 722 VAIVSASTARSEQFLCRYEAHCFALCHCC 750


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 320 DQWTARVANENATDW 364
           D+W A V N + T+W
Sbjct: 334 DRWVANVPNGSVTNW 348


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 190 HIPSYSS*ICAKLNHVQ 240
           H+P YSS I  +L++++
Sbjct: 274 HVPEYSSSIIMELHNIE 290


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 190 HIPSYSS*ICAKLNHVQ 240
           H+P YSS I  +L++++
Sbjct: 289 HVPEYSSSIIMELHNIE 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,573
Number of Sequences: 438
Number of extensions: 3884
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)