Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4463
         (669 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025469-1|AAG00030.3|  578|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p...    28   5.2  
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p...    28   5.2  
U97015-4|AAB52342.1|  245|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z79756-6|CAB02117.3|  693|Caenorhabditis elegans Hypothetical pr...    28   6.9  

>AF025469-1|AAG00030.3|  578|Caenorhabditis elegans Hypothetical
           protein W09B6.3 protein.
          Length = 578

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -3

Query: 634 IYSVQSITLTKCR*PCLQIQT*ISITMNSPSTNSIIIWWPVRNI-VRVEIQCLPL 473
           I  ++ + + KC   C  ++  + +T NSPST  + I    RNI V     C P+
Sbjct: 107 IVQIEKMEVYKC---CAMLREQVFVTFNSPSTAGVAIGVTERNITVAFHPNCSPV 158


>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 264 LQSNS*RRTIGYTSTAKPYTDITVTKPELCR*SEPI 371
           LQS+S   T    STAK ++ +  T+P LC   EPI
Sbjct: 338 LQSHSANGT-SLPSTAKLFSTLPTTRPPLCTIGEPI 372


>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
           protein T04A11.3 protein.
          Length = 1014

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 264 LQSNS*RRTIGYTSTAKPYTDITVTKPELCR*SEPI 371
           LQS+S   T    STAK ++ +  T+P LC   EPI
Sbjct: 159 LQSHSANGT-SLPSTAKLFSTLPTTRPPLCTIGEPI 193


>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 264 LQSNS*RRTIGYTSTAKPYTDITVTKPELCR*SEPI 371
           LQS+S   T    STAK ++ +  T+P LC   EPI
Sbjct: 338 LQSHSANGT-SLPSTAKLFSTLPTTRPPLCTIGEPI 372


>U97015-4|AAB52342.1|  245|Caenorhabditis elegans Hypothetical
           protein F48C1.6 protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 94  PTPNDYKYSYSIEDPTTGDSKS 159
           P PN Y Y+YS+  P++GD+ S
Sbjct: 163 PKPNSYDYTYSV--PSSGDNSS 182


>Z79756-6|CAB02117.3|  693|Caenorhabditis elegans Hypothetical
           protein F53C11.2 protein.
          Length = 693

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
 Frame = -1

Query: 210 YNRVRSCY-KISMAYFVLTFTVSRCGVLYTVRIF-------VVVWCRW 91
           + RV S +  I + YF+ TFT +R    ++V IF       + VWC W
Sbjct: 505 WTRVPSFFIGIFVGYFLATFTKTRLKFHWSVTIFGWVVASGIAVWCLW 552


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,353,114
Number of Sequences: 27780
Number of extensions: 340536
Number of successful extensions: 871
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)