Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4454
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    25   0.52 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   0.52 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.8  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   4.8  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 4/21 (19%)
 Frame = +1

Query: 547 CWIT----YIVRTSCRNCRRP 597
           CW+     Y+VR  CRNC  P
Sbjct: 21  CWLPFFTMYLVRAFCRNCIHP 41


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 4/21 (19%)
 Frame = +1

Query: 547 CWIT----YIVRTSCRNCRRP 597
           CW+     Y+VR  CRNC  P
Sbjct: 469 CWLPFFTMYLVRAFCRNCIHP 489


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 359 TFKPLYLLSYRQRCIQASLRMLP 291
           TF+    + Y +RC+  +LRM P
Sbjct: 390 TFQDTLEMKYLERCLLETLRMYP 412


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 250 YLDKCSATGVICAAGSILRLA*IHLCRY 333
           + D   A  V+C+  SIL L  I L RY
Sbjct: 97  FCDTWIAFDVMCSTASILNLCAISLDRY 124


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 206 RFTLYVSNPPVIFDH*LNNALEYTLVW 126
           +F   V   P+IF+   +N L+  L W
Sbjct: 148 KFPFDVQECPLIFESWTHNVLDMVLYW 174


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,337
Number of Sequences: 438
Number of extensions: 4292
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)