Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4453
(466 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 57 6e-09
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 48 4e-06
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 39 0.002
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 32 0.20
04_03_1015 - 21734381-21736534 29 1.4
03_05_0521 + 25160245-25160883 29 1.4
10_08_0913 + 21527267-21527377,21528290-21528742 29 2.4
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 28 3.2
12_01_0292 + 2193309-2193338,2193565-2193640,2193744-2195203,219... 28 4.3
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323... 28 4.3
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 27 5.6
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 27 5.6
03_01_0583 - 4321169-4321279,4321328-4321384,4321532-4321702,432... 27 5.6
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 27 7.4
06_03_0433 - 20718726-20719895 27 9.8
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 57.2 bits (132), Expect = 6e-09
Identities = 39/134 (29%), Positives = 62/134 (46%)
Frame = -2
Query: 453 ATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQK 274
A +V+++KPGKE+ YRPI L K+L +++ R++ F+ + Q GF+ +
Sbjct: 971 AYIVLIQKPGKENTVD--GYRPISLQNCSVKILSKVLATRLQRVFLRMIHLDQTGFLKGR 1028
Query: 273 STEDALYTLIKHVQDKLRLKKLIVLVSLDIEGAFDSAWWPAIKVRLAKERCPVNTRRLLD 94
+ L + +Q R K ++V LD AFDS W ++ LA P N +
Sbjct: 1029 CISENLIYATELIQACYRRKCQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIK 1088
Query: 93 SYLDCRKVRVRYAG 52
L K V G
Sbjct: 1089 GLLSSSKSAVLLNG 1102
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/94 (26%), Positives = 49/94 (52%)
Frame = -2
Query: 429 PGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQKSTEDALYT 250
P K + +RPI L+ + K++ +++ R++ + +S +GF+ K+ +D
Sbjct: 377 PKKTSLETVNDFRPISLMGISLKIVTKLLAGRLQGVILKLVSDNHYGFIKGKTIQDCPAW 436
Query: 249 LIKHVQDKLRLKKLIVLVSLDIEGAFDSAWWPAI 148
+++ + K+ IVL+ LD E AFD+ AI
Sbjct: 437 PFEYIHQCQQSKREIVLLKLDFEKAFDTIEHSAI 470
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = -2
Query: 450 TVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQKS 271
T +VL P K+ K YRPI L V+ KV+ + +V R++ +S Q F+ +
Sbjct: 950 TAIVLI-PKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDDLVSKEQSAFIQGRM 1008
Query: 270 -TEDAL--YTLIKHVQDKLRLKKLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
T++AL + +Q + LD+ A+D W +++ L K
Sbjct: 1009 ITDNALLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELALNK 1058
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 32.3 bits (70), Expect = 0.20
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Frame = -2
Query: 396 YRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQKSTEDA---LYTLIKHVQDK 226
+RPI L VL K+ +++ R+K +S Q F+P + D+ Y + ++ K
Sbjct: 187 FRPISLCNVLYKIASKVLANRLKLFLPDIVSEFQSAFVPGRLITDSSLVAYECLNTIK-K 245
Query: 225 LRLKKLIVLVSLDIEGAFDSAWWPAIK---VRLAKERCPVNT 109
KK + +D+ A+D W + +RL E+ +NT
Sbjct: 246 QSNKKPFFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINT 287
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 116 TGHLSLASLTLIAGHHALSKAPSISNDTRTISFFSLN 226
T H SLA+ IA H A S APS S+ S F N
Sbjct: 55 TSHRSLAAARRIATHLASSTAPSTSHSFTATSTFLFN 91
>03_05_0521 + 25160245-25160883
Length = 212
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -1
Query: 454 GNGGGSPKTRQGRLHEPQVVSTDRTFAGLGEGPGEDGSSKDQ 329
G+GG S + RL EP+ +T T AG EG G G S+ Q
Sbjct: 104 GDGGRSRGRERRRLPEPEEGAT--TVAGAWEGRGNGGGSRIQ 143
>10_08_0913 + 21527267-21527377,21528290-21528742
Length = 187
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 463 LERGNGGGSPKTRQGRLHEPQVVSTDRTFAGLGEGPGEDGS 341
L+ GN G+ R H Q++S+ R+F G+ + ED S
Sbjct: 17 LQEGNHPGALHACWSRFHSGQMLSSSRSFFGVEDFMDEDNS 57
>01_05_0195 -
19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 162 WWPAIKVRLAKERCPVNTRRLLDSYLDCRKVRVR 61
WW A++ E P+N L DCRK V+
Sbjct: 772 WWVALRAIGHSECLPINEHSFLSWLCDCRKRMVK 805
>12_01_0292 +
2193309-2193338,2193565-2193640,2193744-2195203,
2195479-2195505,2195794-2196024,2196523-2196692,
2197278-2197421,2198036-2198083,2198503-2198566
Length = 749
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 466 HLERGNGG-GSPKTRQGRLHEPQVVSTDRTFAGLGEGPGEDGSSKD 332
HL+ G GG G PK G+ H + G G G G G SKD
Sbjct: 91 HLDGGGGGKGQPKDGGGKGHPKDAGGKGQKGGGGGGGNG-GGGSKD 135
>09_04_0683 -
19431034-19431495,19431632-19431997,19432055-19432326,
19433621-19433686,19433924-19433978,19434509-19434577,
19435200-19435307,19435394-19435462,19435883-19436038,
19436089-19436229,19436514-19436568,19437103-19437233,
19437382-19437486
Length = 684
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 162 WWPAIKVRLAKERCPVNTRRLLDSYLDCRKVRVR 61
WW A++ E P+N L DCRK V+
Sbjct: 579 WWVALRAIGHSECLPLNEHSFLSWLCDCRKKMVK 612
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 459 KEATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQ 295
K + ++ G+ K YRP +PVL V+ R+ +++W F RQ
Sbjct: 381 KASVIICFTSSGRAARLIAK-YRPT--MPVLSVVIPRLKTNQLRWSFTGAFEARQ 432
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 459 KEATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQ 295
K + ++ G+ K YRP +PVL V+ R+ +++W F RQ
Sbjct: 381 KASVIICFTSSGRAARLIAK-YRPT--MPVLSVVIPRLKTNQLRWSFTGAFEARQ 432
>03_01_0583 -
4321169-4321279,4321328-4321384,4321532-4321702,
4321960-4322042,4322581-4322647,4322730-4322780,
4323203-4323265,4323363-4323413,4323500-4323556,
4324261-4324368
Length = 272
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -2
Query: 336 RIKWQFVPRLSTRQFGFMPQKSTEDALYTLIKHVQDKLRLKKLIVLVSLDIEGAFDSAWW 157
R+ Q V R+ + MP L+ + +HVQ + + K LIVL F W
Sbjct: 60 RLSVQIVSRILIKALMAMPGPDFSLCLFLIPEHVQMEEQFKTLIVLSHYLETARFRQFWD 119
Query: 156 PAIKVR 139
A K R
Sbjct: 120 EASKNR 125
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 284 IKPNWRVLSRGTNCHLILATTILSRTFP 367
+K NW + R +CHL T L FP
Sbjct: 3398 LKNNWSLWKRAKSCHLTFNQTELKVEFP 3425
>06_03_0433 - 20718726-20719895
Length = 389
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 412 HEPQVVSTDRTFAGLGEGPGEDGSSK 335
H+ + +TDR+ AG G G DG+++
Sbjct: 76 HDDDIRNTDRSKAGEGHGSSADGNTE 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,907,945
Number of Sequences: 37544
Number of extensions: 305770
Number of successful extensions: 851
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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