Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4453
(466 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein. 53 4e-07
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein. 53 6e-07
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 52 7e-07
AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein. 52 1e-06
U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein. 52 1e-06
U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein. 52 1e-06
U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein. 52 1e-06
U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein. 52 1e-06
U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein. 52 1e-06
M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposo... 52 1e-06
M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein. 52 1e-06
AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein. 52 1e-06
AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein. 52 1e-06
AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein. 52 1e-06
AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein. 52 1e-06
U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein. 51 2e-06
M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein. 50 5e-06
U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein. 48 1e-05
AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens ... 48 1e-05
AF154915-2|AAF79045.1| 338|Homo sapiens transcription factor HO... 31 2.6
BC048216-1|AAH48216.1| 620|Homo sapiens deltex homolog 1 (Droso... 29 6.0
BC005816-1|AAH05816.2| 225|Homo sapiens DTX1 protein protein. 29 6.0
AF053700-1|AAC06246.1| 620|Homo sapiens deltex protein. 29 6.0
>U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 53.2 bits (122), Expect = 4e-07
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
++ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIHKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 52.8 bits (121), Expect = 6e-07
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K V++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNK 619
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 52.4 bits (120), Expect = 7e-07
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAKERCPVNTRRL 100
+ I +Q R K K +++S+D E AFD P + L K ++
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKI 629
Query: 99 LDSYLDCRKVRVRYAGEE 46
+ + D +R G++
Sbjct: 630 IRAIYDKPTANIRLNGQK 647
>AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein.
Length = 420
Score = 52.0 bits (119), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 160 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 218
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 219 MQGWFNICKSINVIQHINRAKDKSHMIISIDAEKAFDKIQQPFMLKTLNK 268
>U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRTKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposon
L1.2. ).
Length = 1275
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein.
Length = 1192
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 428 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 486
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 487 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 536
>AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein.
Length = 573
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 25 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 83
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 84 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 133
>U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 51.2 bits (117), Expect = 2e-06
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQPIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 49.6 bits (113), Expect = 5e-06
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K +++S+D E AFD P + L K
Sbjct: 570 MQGWFNIRKSINVIQHINRANDKNHMIISIDAEKAFDKIQQPFMLKTLNK 619
>U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 48.4 bits (110), Expect = 1e-05
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
EA+++++ KPG+ D T +++RPI L+ + K+L +++ +I+ + Q GF+P
Sbjct: 511 EASIILIPKPGR-DTTKKENFRPISLMNIDAKILNKILANQIQQHIKKLIHHDQVGFIPG 569
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E A D P + L K
Sbjct: 570 MQGWFNMCKSINVIQHINRAKDKNHMIISIDAEKALDKIQQPFVLKTLNK 619
>AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ39824 fis, clone SPLEN2011981. ).
Length = 372
Score = 48.4 bits (110), Expect = 1e-05
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = -2
Query: 456 EATVVVLRKPGKEDYTSPKSYRPIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQ 277
E +++++ KPG+ D T ++RPI L+ + K+L +++ RI+ + Q GF+P
Sbjct: 83 EDSIILIPKPGR-DTTKKDNFRPISLMNIDAKILNKILAKRIQQHIKKLIHHDQVGFIPG 141
Query: 276 KSTEDALYTLIKHVQDKLRLK-KLIVLVSLDIEGAFDSAWWPAIKVRLAK 130
+ I +Q R K K +++S+D E AFD P + L K
Sbjct: 142 MQGWFNIGKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK 191
>AF154915-2|AAF79045.1| 338|Homo sapiens transcription factor
HOXD11 protein.
Length = 338
Score = 30.7 bits (66), Expect = 2.6
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 454 GNGGGSPKTRQGRLHEPQVVSTDRTFAGLGEG-PGEDGSSKDQMAI 320
G GGGSP T+ EP+ + G GEG PGE G+ K A+
Sbjct: 218 GGGGGSPCTKATPGSEPKGAAEGS--GGDGEGPPGEAGAEKSSSAV 261
>BC048216-1|AAH48216.1| 620|Homo sapiens deltex homolog 1
(Drosophila) protein.
Length = 620
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 368 KTGKSPIGRYDLGLV*SSLPGFRRTTTV 451
KTG P G+ + L+ SLPGF T T+
Sbjct: 478 KTGTQPPGKMEFHLIPHSLPGFPDTQTI 505
>BC005816-1|AAH05816.2| 225|Homo sapiens DTX1 protein protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 368 KTGKSPIGRYDLGLV*SSLPGFRRTTTV 451
KTG P G+ + L+ SLPGF T T+
Sbjct: 83 KTGTQPPGKMEFHLIPHSLPGFPDTQTI 110
>AF053700-1|AAC06246.1| 620|Homo sapiens deltex protein.
Length = 620
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 368 KTGKSPIGRYDLGLV*SSLPGFRRTTTV 451
KTG P G+ + L+ SLPGF T T+
Sbjct: 478 KTGTQPPGKMEFHLIPHSLPGFPDTQTI 505
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,940,822
Number of Sequences: 237096
Number of extensions: 1591346
Number of successful extensions: 3459
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3457
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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