Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4453
         (466 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    24   0.93 
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    24   0.93 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.1  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   2.8  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   2.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   4.9  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   4.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   8.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.6  

>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 102 LLDSYLDCRKVRVRYAGEECTRETNKGCV 16
           +LD  ++ +K  +R   E C  + N+ C+
Sbjct: 18  MLDHTINSKKTIMRILKEVCVLQANRACI 46


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 102 LLDSYLDCRKVRVRYAGEECTRETNKGCV 16
           +LD  ++ +K  +R   E C  + N+ C+
Sbjct: 1   MLDHTINSKKTIMRILKEVCVLQANRACI 29


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -2

Query: 390 PIGLLPVLGKVLERMVVARIKWQFVPRLSTRQFGFMPQKSTEDALYTLIKHVQDKL 223
           P  L+P L K   +++    K +F  ++     GF+ Q   +  L  L +HV+D L
Sbjct: 43  PENLIPRLAKKAIQVLGVTEK-EFFDQMGVHFVGFVGQYGYDRVLSVLGRHVRDFL 97


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 73  SESKVRWGRMHKRDKQRL 20
           S   VR+GR+ KR+K R+
Sbjct: 134 SRDAVRFGRVPKREKARI 151


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -2

Query: 117 VNTRRLLDSYLDC 79
           +NT RLL++Y++C
Sbjct: 37  LNTERLLNAYVNC 49


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -2

Query: 117 VNTRRLLDSYLDC 79
           +NT RLL++Y++C
Sbjct: 37  LNTERLLNAYVNC 49


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 295 VWLYAPEEHRGRPLYSNKTRTRQVEAEE 212
           V+L    +H+GRP+  +K +   VE ++
Sbjct: 537 VFLGPKHDHQGRPISISKNQHLFVELDQ 564


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 456 EATVVVLRKPGKEDYTSPKSYR 391
           ++T+  LR     D TSP  YR
Sbjct: 406 QSTIQTLRPQVSPDRTSPMEYR 427


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 145 FDCWPPCAVEGSLYI 189
           F CW P  V+  LY+
Sbjct: 270 FICWAPFHVQRLLYV 284


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 289 LYAPEEHRGRPLYSN 245
           L +P EHR  P+Y +
Sbjct: 58  LSSPPEHRDLPIYQS 72


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +1

Query: 301 STKPRHKLPFDPCYYHPLQDLPQDRQ 378
           S  P    P D CY+     LP D Q
Sbjct: 415 SPPPEDWKPLDKCYFCLDGKLPHDDQ 440


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,463
Number of Sequences: 438
Number of extensions: 2874
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)