Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4447
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X61498-1|CAA43715.1| 933|Homo sapiens NF-kB subunit protein. 37 0.083
U16282-1|AAA57120.1| 621|Homo sapiens ELL protein. 36 0.14
S77890-2|AAB34056.1| 576|Homo sapiens MEN protein. 36 0.14
BC049195-1|AAH49195.1| 621|Homo sapiens elongation factor RNA p... 36 0.14
AB208794-1|BAD92031.1| 565|Homo sapiens elongation factor RNA p... 36 0.14
AB011399-2|BAA32484.1| 1816|Homo sapiens AF-6 protein. 36 0.14
BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein. 33 1.4
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 33 1.4
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 33 1.4
AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein. 32 2.4
BC090950-1|AAH90950.1| 252|Homo sapiens AAK1 protein protein. 31 3.1
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p... 31 3.1
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein. 31 3.1
L27841-1|AAA60120.1| 2024|Homo sapiens pericentriol material 1 p... 31 4.1
BX537764-1|CAD97829.1| 1546|Homo sapiens hypothetical protein pr... 31 4.1
BC133052-1|AAI33053.1| 1859|Homo sapiens PCM1 protein protein. 31 4.1
BC065022-1|AAH65022.1| 448|Homo sapiens PCM1 protein protein. 31 4.1
BC027477-1|AAH27477.1| 408|Homo sapiens PCM1 protein protein. 31 4.1
BC000453-1|AAH00453.1| 530|Homo sapiens PCM1 protein protein. 31 4.1
AY335492-1|AAR01262.1| 1529|Homo sapiens GON4L isoform B protein. 31 4.1
AK094869-1|BAC04443.1| 427|Homo sapiens protein ( Homo sapiens ... 31 4.1
AB208792-1|BAD92029.1| 729|Homo sapiens Rho GTPase activating p... 31 4.1
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 31 5.4
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 31 5.4
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 31 5.4
AL357374-12|CAI13607.1| 193|Homo sapiens RNA binding motif prot... 31 5.4
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 31 5.4
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 31 5.4
AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein. 31 5.4
AK128156-1|BAC87302.1| 216|Homo sapiens protein ( Homo sapiens ... 31 5.4
BC115703-1|AAI15704.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 7.2
BC114629-1|AAI14630.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 7.2
BC052260-1|AAH52260.1| 571|Homo sapiens GON4L protein protein. 30 7.2
BC018722-1|AAH18722.1| 553|Homo sapiens alveolar soft part sarc... 30 7.2
BC006152-1|AAH06152.1| 348|Homo sapiens ASPSCR1 protein protein. 30 7.2
AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein. 30 7.2
AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein. 30 7.2
AL139128-5|CAH69947.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 7.2
AK026693-1|BAB15528.1| 344|Homo sapiens protein ( Homo sapiens ... 30 7.2
AB232668-1|BAF51560.1| 1543|Homo sapiens YY1AP-related protein3 ... 30 7.2
AB195688-1|BAF51557.1| 970|Homo sapiens YY1AP-related protein2 ... 30 7.2
AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1 ... 30 7.2
X53468-2|CAA37563.1| 278|Homo sapiens protein ( Human oct-2 mRN... 30 9.5
M36653-2|AAA36390.1| 278|Homo sapiens protein ( Human Oct-2 fac... 30 9.5
BC008746-1|AAH08746.1| 538|Homo sapiens CWF19L1 protein protein. 30 9.5
AY313926-1|AAP93895.1| 120|Homo sapiens activating transcriptio... 30 9.5
AL138921-5|CAH72402.1| 253|Homo sapiens novel protein protein. 30 9.5
AK057851-1|BAB71595.1| 501|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK001860-1|BAA91947.1| 538|Homo sapiens protein ( Homo sapiens ... 30 9.5
AF118265-1|AAD21055.1| 502|Homo sapiens orphan G protein-couple... 30 9.5
>X61498-1|CAA43715.1| 933|Homo sapiens NF-kB subunit protein.
Length = 933
Score = 36.7 bits (81), Expect = 0.083
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 318 SLLHSVLQRTTPASISGELYARAKGFPRGPLRAPA-RGYDDPD*LTAN-SVRDSEPASQD 491
SL+ + Q T+P+ Y A G G L A + G ++ L RD P+++
Sbjct: 801 SLVDTYRQTTSPSGSLLRSYELAGGDLAGLLEALSDMGLEEGVRLLRGPETRDKLPSTEV 860
Query: 492 LSRRRGESQSTTRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQPLRQ 653
SQS ++ L P P P G H + V L P P+P+P P+++
Sbjct: 861 KEDSAYGSQSVEQEAEKLGPPPEPPGGLSHGHPQPQVTDLLPAPSPLPGPPVQR 914
>U16282-1|AAA57120.1| 621|Homo sapiens ELL protein.
Length = 621
Score = 35.9 bits (79), Expect = 0.14
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Frame = +2
Query: 335 PAAHHPCLD------KRGVICPGKGVSPRPAPCPRKGVRRPRLTDCKFSSRQRAGESRPL 496
P AH P D G C G + PAP R G+ P LTDC SR SR
Sbjct: 391 PRAHDPLADVSNDLGHSGRDCE-HGEAAAPAPTVRLGL--PLLTDCAQPSRPHGSPSRSK 447
Query: 497 QKKRREPIDDKKRLA 541
KK+ + DK+R A
Sbjct: 448 PKKKSKKHKDKERAA 462
>S77890-2|AAB34056.1| 576|Homo sapiens MEN protein.
Length = 576
Score = 35.9 bits (79), Expect = 0.14
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Frame = +2
Query: 335 PAAHHPCLD------KRGVICPGKGVSPRPAPCPRKGVRRPRLTDCKFSSRQRAGESRPL 496
P AH P D G C G + PAP R G+ P LTDC SR SR
Sbjct: 346 PRAHDPLADVSNDLGHSGRDCE-HGEAAAPAPTVRLGL--PLLTDCAQPSRPHGSPSRSK 402
Query: 497 QKKRREPIDDKKRLA 541
KK+ + DK+R A
Sbjct: 403 PKKKSKKHKDKERAA 417
>BC049195-1|AAH49195.1| 621|Homo sapiens elongation factor RNA
polymerase II protein.
Length = 621
Score = 35.9 bits (79), Expect = 0.14
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Frame = +2
Query: 335 PAAHHPCLD------KRGVICPGKGVSPRPAPCPRKGVRRPRLTDCKFSSRQRAGESRPL 496
P AH P D G C G + PAP R G+ P LTDC SR SR
Sbjct: 391 PRAHDPLADVSNDLGHSGRDCE-HGEAAAPAPTVRLGL--PLLTDCAQPSRPHGSPSRSK 447
Query: 497 QKKRREPIDDKKRLA 541
KK+ + DK+R A
Sbjct: 448 PKKKSKKHKDKERAA 462
>AB208794-1|BAD92031.1| 565|Homo sapiens elongation factor RNA
polymerase II variant protein.
Length = 565
Score = 35.9 bits (79), Expect = 0.14
Identities = 28/75 (37%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Frame = +2
Query: 335 PAAHHPCLD------KRGVICPGKGVSPRPAPCPRKGVRRPRLTDCKFSSRQRAGESRPL 496
P AH P D G C G + PAP R G+ P LTDC SR SR
Sbjct: 335 PRAHDPLADVSNDLGHSGRDCE-HGEAAAPAPTVRLGL--PLLTDCAQPSRPHGSPSRSK 391
Query: 497 QKKRREPIDDKKRLA 541
KK+ + DK+R A
Sbjct: 392 PKKKSKKHKDKERAA 406
>AB011399-2|BAA32484.1| 1816|Homo sapiens AF-6 protein.
Length = 1816
Score = 35.9 bits (79), Expect = 0.14
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 438 PD*L-TANSVR-DSEPASQDLSRRRGESQSTTRKD-SLLRPAPVKPR-GPCERHTEAFVI 605
PD L TA V + E +D S + S+TRK L PAP+KPR PC+ + +
Sbjct: 1705 PDSLFTAKFVAYNEEEEEEDCSLAGQDKYSSTRKSHGDLLPAPLKPRPPPCQPRPASDGV 1764
Query: 606 FL-EPIPAPVPRQPLRQYSRGGPVPNSPYSESFYNS 710
FL P + + +G P+P S S++ S
Sbjct: 1765 FLSNSFQPPSAKANSTAHKKGQPLPPPKKSSSYHPS 1800
>BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein.
Length = 620
Score = 32.7 bits (71), Expect = 1.4
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 469 TASRRVKTSPEEEERANRRQEKTRSYALRRSSHEDRVNAILKPSLFSSNQSQHPFR 636
++ RRVK+ + ER+ R + + + RSSH+D + K + S + S+ P R
Sbjct: 530 SSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKR 585
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 32.7 bits (71), Expect = 1.4
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 469 TASRRVKTSPEEEERANRRQEKTRSYALRRSSHEDRVNAILKPSLFSSNQSQHPFR 636
++ RRVK+ + ER+ R + + + RSSH+D + K + S + S+ P R
Sbjct: 937 SSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKR 992
>AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein.
Length = 1028
Score = 32.7 bits (71), Expect = 1.4
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 469 TASRRVKTSPEEEERANRRQEKTRSYALRRSSHEDRVNAILKPSLFSSNQSQHPFR 636
++ RRVK+ + ER+ R + + + RSSH+D + K + S + S+ P R
Sbjct: 938 SSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKR 993
>AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.
Length = 1004
Score = 31.9 bits (69), Expect = 2.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 320 PASLSPAAHHPCLDKRGVICPGKGVSPRPAPCPRKGVRRPRLTDCKFSS 466
P ++ P P +GV P KG PAP P R RL + KFSS
Sbjct: 938 PEAVPPPPAPPSYSDKGVQTPSKGT---PAPLPNGNHRYCRLCNIKFSS 983
>BC090950-1|AAH90950.1| 252|Homo sapiens AAK1 protein protein.
Length = 252
Score = 31.5 bits (68), Expect = 3.1
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -2
Query: 453 QSVSRGRRTPLRG-HGAGLGETPLPGHITPRLSRQGWCAAG-LSEAGLE 313
QS SRGR P+RG A GE P+P PR + G G + AG E
Sbjct: 56 QSSSRGRLLPIRGDRTAVAGEAPVPRRAAPRGTSGGGSLPGWVDGAGRE 104
>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
protein.
Length = 2715
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +3
Query: 498 RRRGESQSTTRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQP 644
R R ST R+ S RP P +P GPC R +A V+ + P P P
Sbjct: 207 RSRACEPSTPRR-SRGRP-PGRPAGPCRRKQQAVVVAEAAVTIPKPEPP 253
>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
Length = 2605
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +3
Query: 498 RRRGESQSTTRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQP 644
R R ST R+ S RP P +P GPC R +A V+ + P P P
Sbjct: 97 RSRACEPSTPRR-SRGRP-PGRPAGPCRRKQQAVVVAEAAVTIPKPEPP 143
>L27841-1|AAA60120.1| 2024|Homo sapiens pericentriol material 1
protein.
Length = 2024
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 456 NSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPCER 584
N +RDS+P + +RR+ ES S TR+ S R R P E+
Sbjct: 352 NQLRDSQPPAVPDNRRQAESLSLTREVSQSRKPSASERLPDEK 394
>BX537764-1|CAD97829.1| 1546|Homo sapiens hypothetical protein
protein.
Length = 1546
Score = 31.1 bits (67), Expect = 4.1
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 416 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTAPAIRHISAEVVPMGPPPPPKPKQ 473
>BC133052-1|AAI33053.1| 1859|Homo sapiens PCM1 protein protein.
Length = 1859
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 456 NSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPCER 584
N +RDS+P + +RR+ ES S TR+ S R R P E+
Sbjct: 351 NQLRDSQPPAVPDNRRQAESLSLTREVSQSRKPSASERLPDEK 393
>BC065022-1|AAH65022.1| 448|Homo sapiens PCM1 protein protein.
Length = 448
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 456 NSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPCER 584
N +RDS+P + +RR+ ES S TR+ S R R P E+
Sbjct: 390 NQLRDSQPPAVPDNRRQAESLSLTREVSQSRKPSASERLPDEK 432
>BC027477-1|AAH27477.1| 408|Homo sapiens PCM1 protein protein.
Length = 408
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 456 NSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPCER 584
N +RDS+P + +RR+ ES S TR+ S R R P E+
Sbjct: 351 NQLRDSQPPAVPDNRRQAESLSLTREVSQSRKPSASERLPDEK 393
>BC000453-1|AAH00453.1| 530|Homo sapiens PCM1 protein protein.
Length = 530
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 456 NSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPCER 584
N +RDS+P + +RR+ ES S TR+ S R R P E+
Sbjct: 390 NQLRDSQPPAVPDNRRQAESLSLTREVSQSRKPSASERLPDEK 432
>AY335492-1|AAR01262.1| 1529|Homo sapiens GON4L isoform B protein.
Length = 1529
Score = 31.1 bits (67), Expect = 4.1
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 399 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTAPAIRHISAEVVPMGPPPPPKPKQ 456
>AK094869-1|BAC04443.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ37550 fis, clone BRCAN2028036. ).
Length = 427
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 311 NSKPASLSPAAHHPCLDKRGVICPGKGVSPRPAPCPRKGVRRPRL 445
+S PA L+P+ C +RG + P S PA C V RPRL
Sbjct: 304 HSTPARLTPSKSQNCA-RRGHLIPSCVSSRAPAMCSSPRVPRPRL 347
>AB208792-1|BAD92029.1| 729|Homo sapiens Rho GTPase activating
protein 6 isoform 1 variant protein.
Length = 729
Score = 31.1 bits (67), Expect = 4.1
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 297 PPNITTPSLLHSVLQRTTPASISGELYARAKGFPRGPLR 413
P ++ SLLHSV ++PAS S A AKGF + LR
Sbjct: 69 PAEMSAQSLLHSVFSCSSPASSSA---ASAKGFSKRKLR 104
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 30.7 bits (66), Expect = 5.4
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +3
Query: 399 RGPLRAPARGYDDPD*LTANSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPC 578
RG R+P Y P +A + P S LSRRR S+S RKD P+ P
Sbjct: 92 RGRYRSP---YSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPE 148
Query: 579 ERHTEAFVIFLEPIPAPVPRQPLRQY 656
ER +A +F + A + + L ++
Sbjct: 149 ER--DARTVFCMQLAARIRPRDLEEF 172
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 30.7 bits (66), Expect = 5.4
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +3
Query: 399 RGPLRAPARGYDDPD*LTANSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPC 578
RG R+P Y P +A + P S LSRRR S+S RKD P+ P
Sbjct: 92 RGRYRSP---YSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPE 148
Query: 579 ERHTEAFVIFLEPIPAPVPRQPLRQY 656
ER +A +F + A + + L ++
Sbjct: 149 ER--DARTVFCMQLAARIRPRDLEEF 172
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 30.7 bits (66), Expect = 5.4
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +3
Query: 399 RGPLRAPARGYDDPD*LTANSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPC 578
RG R+P Y P +A + P S LSRRR S+S RKD P+ P
Sbjct: 92 RGRYRSP---YSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPE 148
Query: 579 ERHTEAFVIFLEPIPAPVPRQPLRQY 656
ER +A +F + A + + L ++
Sbjct: 149 ER--DARTVFCMQLAARIRPRDLEEF 172
>AL357374-12|CAI13607.1| 193|Homo sapiens RNA binding motif protein
39 protein.
Length = 193
Score = 30.7 bits (66), Expect = 5.4
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +3
Query: 399 RGPLRAPARGYDDPD*LTANSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPC 578
RG R+P Y P +A + P S LSRRR S+S RKD P+ P
Sbjct: 92 RGRYRSP---YSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPE 148
Query: 579 ERHTEAFVIFLEPIPAPVPRQPLRQY 656
ER +A +F + A + + L ++
Sbjct: 149 ER--DARTVFCMQLAARIRPRDLEEF 172
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 30.7 bits (66), Expect = 5.4
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +3
Query: 399 RGPLRAPARGYDDPD*LTANSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPC 578
RG R+P Y P +A + P S LSRRR S+S RKD P+ P
Sbjct: 92 RGRYRSP---YSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPE 148
Query: 579 ERHTEAFVIFLEPIPAPVPRQPLRQY 656
ER +A +F + A + + L ++
Sbjct: 149 ER--DARTVFCMQLAARIRPRDLEEF 172
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 30.7 bits (66), Expect = 5.4
Identities = 27/86 (31%), Positives = 39/86 (45%)
Frame = +3
Query: 399 RGPLRAPARGYDDPD*LTANSVRDSEPASQDLSRRRGESQSTTRKDSLLRPAPVKPRGPC 578
RG R+P Y P +A + P S LSRRR S+S RKD P+ P
Sbjct: 92 RGRYRSP---YSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPE 148
Query: 579 ERHTEAFVIFLEPIPAPVPRQPLRQY 656
ER +A +F + A + + L ++
Sbjct: 149 ER--DARTVFCMQLAARIRPRDLEEF 172
>AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein.
Length = 440
Score = 30.7 bits (66), Expect = 5.4
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2
Query: 432 RTPLRGHGAGLGETPLPGHITPR 364
R+P GH LG PLPGH TPR
Sbjct: 164 RSPFPGHSPLLGHYPLPGH-TPR 185
>AK128156-1|BAC87302.1| 216|Homo sapiens protein ( Homo sapiens
cDNA FLJ46279 fis, clone TESTI4030319. ).
Length = 216
Score = 30.7 bits (66), Expect = 5.4
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Frame = +2
Query: 335 PAAHHPCLDKRGVICPGKGVSPRPAPCPRKGVRRPRLTDCKFSSRQRAGESRPL-QKKRR 511
P C +CP +PRP P +G R R + + R + SRP R
Sbjct: 64 PHGDRRCFSAAPGLCPPTPRAPRPLP---RGPSRARRGEAE-GPRAISAASRPTGSSSYR 119
Query: 512 EPIDDKKRLAPTPCAGQATRTV*TPY*SLRYFPRTNPSTRSATATAAILEGGPGTQ 679
PI R +P CA QA +P + P S +AA+ GG G+Q
Sbjct: 120 GPIRSCARASPC-CARQA-----SPALAPGRCPTPRQGRESGGRSAALRAGGRGSQ 169
>BC115703-1|AAI15704.1| 1529|Homo sapiens gon-4-like (C. elegans)
protein.
Length = 1529
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 399 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQ 456
>BC114629-1|AAI14630.1| 1529|Homo sapiens gon-4-like (C. elegans)
protein.
Length = 1529
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 399 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQ 456
>BC052260-1|AAH52260.1| 571|Homo sapiens GON4L protein protein.
Length = 571
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 179 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQ 236
>BC018722-1|AAH18722.1| 553|Homo sapiens alveolar soft part sarcoma
chromosome region, candidate 1 protein.
Length = 553
Score = 30.3 bits (65), Expect = 7.2
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +3
Query: 510 ESQSTTRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAP-VPRQPLRQYSRGGPVPNSP 686
ES +R D L RP GPC HT+ P AP VP Q G P P P
Sbjct: 203 ESGELSRGD-LSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQRQGGPPGPTRP 261
Query: 687 YSES 698
+ S
Sbjct: 262 LTSS 265
>BC006152-1|AAH06152.1| 348|Homo sapiens ASPSCR1 protein protein.
Length = 348
Score = 30.3 bits (65), Expect = 7.2
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +3
Query: 510 ESQSTTRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAP-VPRQPLRQYSRGGPVPNSP 686
ES +R D L RP GPC HT+ P AP VP Q G P P P
Sbjct: 126 ESGELSRGD-LSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQRQGGPPGPTRP 184
Query: 687 YSES 698
+ S
Sbjct: 185 LTSS 188
>AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein.
Length = 2241
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 399 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQ 456
>AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein.
Length = 2241
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 399 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQ 456
>AL139128-5|CAH69947.1| 1529|Homo sapiens gon-4-like (C. elegans)
protein.
Length = 1529
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 399 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQ 456
>AK026693-1|BAB15528.1| 344|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23040 fis, clone LNG02277. ).
Length = 344
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 93 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQ 150
>AB232668-1|BAF51560.1| 1543|Homo sapiens YY1AP-related protein3
protein.
Length = 1543
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 399 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPIGPPPPPKPKQ 456
>AB195688-1|BAF51557.1| 970|Homo sapiens YY1AP-related protein2
protein.
Length = 970
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 399 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQ 456
>AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1
protein.
Length = 2240
Score = 30.3 bits (65), Expect = 7.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 471 SEPASQDLSRRRGESQST-TRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAPVPRQ 641
S P SR R S+ T T ++S + K P RH A V+ + P P P P+Q
Sbjct: 399 SSPRGAKKSRLRQSSEMTETDEESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQ 456
>X53468-2|CAA37563.1| 278|Homo sapiens protein ( Human oct-2 mRNA
for B-cell specific transcription factor NF-A2. ).
Length = 278
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 365 RGVICPGKGVSPRPAPCPRKGVRRPRLTDCKFSSRQRAGESRPLQKKRREPIDDKKRLAP 544
R +C K P+PA P+ G RRP + + + R + RPL+ + + + L
Sbjct: 46 RDYVCGLKPAQPQPAEQPQPGFRRPARPETQEEDQHR--DKRPLRLREEFSSEPEAYLRG 103
Query: 545 TPCAGQA 565
P +A
Sbjct: 104 DPADRRA 110
>M36653-2|AAA36390.1| 278|Homo sapiens protein ( Human Oct-2 factor
mRNA, complete cds. ).
Length = 278
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 365 RGVICPGKGVSPRPAPCPRKGVRRPRLTDCKFSSRQRAGESRPLQKKRREPIDDKKRLAP 544
R +C K P+PA P+ G RRP + + + R + RPL+ + + + L
Sbjct: 46 RDYVCGLKPAQPQPAEQPQPGFRRPARPETQEEDQHR--DKRPLRLREEFSSEPEAYLRG 103
Query: 545 TPCAGQA 565
P +A
Sbjct: 104 DPADRRA 110
>BC008746-1|AAH08746.1| 538|Homo sapiens CWF19L1 protein protein.
Length = 538
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 489 DLSRRRGESQSTTRKDSLLRPAPVKPRGP 575
DL+ ++G +S+T +DS P P +PR P
Sbjct: 293 DLNEKQGRKRSSTGRDSKSSPHPKQPRKP 321
>AY313926-1|AAP93895.1| 120|Homo sapiens activating transcription
factor 3 delta Zip3 protein.
Length = 120
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 481 RVKTSPEEEERANRRQEKTRSYALR-RSSHEDRVNAILKPSLF 606
+ + +PEE+ER RR+E+ + A + R+ +++ + K S F
Sbjct: 78 KAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKVSAF 120
>AL138921-5|CAH72402.1| 253|Homo sapiens novel protein protein.
Length = 253
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 489 DLSRRRGESQSTTRKDSLLRPAPVKPRGP 575
DL+ ++G +S+T +DS P P +PR P
Sbjct: 48 DLNEKQGRKRSSTGRDSKSSPHPKQPRKP 76
>AK057851-1|BAB71595.1| 501|Homo sapiens protein ( Homo sapiens
cDNA FLJ25122 fis, clone CBR06126. ).
Length = 501
Score = 29.9 bits (64), Expect = 9.5
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +3
Query: 510 ESQSTTRKDSLLRPAPVKPRGPCERHTEAFVIFLEPIPAP-VPRQPLRQYSRGGPVPNSP 686
ES +R D L RP GPC HT+ P AP VP Q G P P P
Sbjct: 126 ESGELSRGD-LSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQRLGGPPEPTRP 184
Query: 687 YSES 698
+ S
Sbjct: 185 LTSS 188
>AK001860-1|BAA91947.1| 538|Homo sapiens protein ( Homo sapiens
cDNA FLJ10998 fis, clone PLACE1002465. ).
Length = 538
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 489 DLSRRRGESQSTTRKDSLLRPAPVKPRGP 575
DL+ ++G +S+T +DS P P +PR P
Sbjct: 293 DLNEKQGRKRSSTGRDSKSSPHPKQPRKP 321
>AF118265-1|AAD21055.1| 502|Homo sapiens orphan G protein-coupled
receptor GPR44 protein.
Length = 502
Score = 29.9 bits (64), Expect = 9.5
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 462 VRDSEPASQDLSRRRGESQSTTRKDSLLR--PAPVKPRGPCERHTEAFVIFLEPIPAPVP 635
V DSE SRRR S ST R S L P +PRGP R ++ L +PA P
Sbjct: 405 VDDSELGGAGSSRRRRTS-STARSASPLALCSRPEEPRGPA-RLLGWLLVQLRSVPADGP 462
Query: 636 RQP 644
+P
Sbjct: 463 PEP 465
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,566,240
Number of Sequences: 237096
Number of extensions: 2239152
Number of successful extensions: 10610
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 8973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10570
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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