Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4446
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 39 0.003
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 34 0.097
01_05_0417 - 21961780-21962157 34 0.097
06_03_0498 - 21432958-21434245,21434579-21435310,21435502-214357... 32 0.30
05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-56... 31 0.52
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 31 0.68
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 31 0.68
10_08_0605 + 19158167-19158309,19158726-19158834,19159099-191592... 31 0.90
09_02_0108 - 4358051-4358645,4358722-4359137,4360307-4360903,436... 31 0.90
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 31 0.90
06_01_0196 + 1520015-1520191,1520483-1520527,1521851-1521910,152... 30 1.6
06_03_0636 + 22983898-22985043 29 2.1
01_05_0428 + 22060431-22060850 29 2.1
04_04_1553 - 34363848-34366058,34369087-34370451 29 2.7
01_06_1332 - 36379736-36379909,36380395-36380459,36380534-363806... 29 2.7
11_06_0690 + 26303733-26306540 28 4.8
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 28 4.8
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141... 28 4.8
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 28 4.8
03_05_0559 - 25610474-25610951,25611149-25611890,25612355-256127... 28 4.8
02_05_0906 + 32662199-32662376,32662506-32662615,32662776-326628... 28 4.8
12_02_0814 - 23410278-23411854,23411933-23412166,23412688-234127... 28 6.3
08_02_1422 - 26971803-26971900,26974083-26975061 28 6.3
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 28 6.3
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 28 6.3
03_05_0563 - 25651529-25651621,25651712-25651790,25651875-256519... 28 6.3
03_02_0918 + 12381662-12383118,12383249-12384707 28 6.3
01_01_0208 + 1780275-1781123 28 6.3
11_06_0466 + 23903000-23904041,23905282-23905672,23905708-23906188 27 8.4
08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150 27 8.4
06_03_0046 - 15852653-15854560 27 8.4
05_04_0376 - 20754386-20755392,20755683-20756320,20756433-207566... 27 8.4
04_03_0744 + 19237901-19237912,19238119-19238611,19238860-192389... 27 8.4
02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608 27 8.4
01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126... 27 8.4
01_01_0353 - 2802779-2802794,2802901-2802962,2803458-2803844 27 8.4
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = -3
Query: 280 PHKKGTPSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALCARDQKTATEPPSCVLCRT 104
P G C NC GH + C C C H C + P C LC
Sbjct: 115 PMLPGEMRLCSNCYKPGHLAAECTNEKACNNCRKSGHLARNCPNE-------PVCNLCNV 167
Query: 103 QGHPANYRGCPRAPKINRR 47
GH A R CP++ IN R
Sbjct: 168 SGHLA--RECPKSDAINER 184
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = -3
Query: 253 CHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANYRGC 74
C+NC+ GH +R+C P C HA L + C C+ GH AN C
Sbjct: 41 CNNCKRPGHFARDC---PNVALC---HACGLPGHIAAECSSKDLCWNCKEPGHMAN--SC 92
Query: 73 P 71
P
Sbjct: 93 P 93
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = -3
Query: 313 VCRLSGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALCARDQKTA 137
+C G+ + + C NC+ GH + +C C C H C+
Sbjct: 59 LCHACGLPGHIAAECSSKDLCWNCKEPGHMANSCPNEGICRNCGKSGHIARECSAPPMLP 118
Query: 136 TEPPSCVLCRTQGHPA 89
E C C GH A
Sbjct: 119 GEMRLCSNCYKPGHLA 134
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 33.9 bits (74), Expect = 0.097
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Frame = -3
Query: 397 GRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSG-IAVEAPHKKGTPSQ--CHNCQLYGH 227
G GR + + + ++P G++ F +C+ + +A P K C C+ GH
Sbjct: 53 GAGRSKHPLRVPGMRP---GERCF----ICKAADHVAKVCPEKSLWEKNKICLLCRQRGH 105
Query: 226 SSRNC------HARPRCVKC-LGDHATALCARD-QKTATEPPSCVLCRTQGHPANYRGCP 71
S +NC + + C C H+ + C + + T+ SC +C+ QGH + + CP
Sbjct: 106 SLKNCPDKNDENLKKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLS--KNCP 163
>01_05_0417 - 21961780-21962157
Length = 125
Score = 33.9 bits (74), Expect = 0.097
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 136 TEPPSCVLCRTQGHPANYRGCPRAP 62
T PP C C QG P+ GCP AP
Sbjct: 5 TPPPPCAACAHQGRPSCPAGCPLAP 29
>06_03_0498 -
21432958-21434245,21434579-21435310,21435502-21435788,
21435955-21436026,21436130-21436264,21436887-21436925
Length = 850
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 301 SGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPS 122
SG+ ++A KG ++ + G +S + P+C G H + +
Sbjct: 763 SGVGIDAESTKGAVAETETTDMVGIASTSVLLDPKCSNIKGRHKSEPRKKRLIDVIRSKG 822
Query: 121 CVLCRTQG-HPANYRGCPR 68
V C G H N R CP+
Sbjct: 823 LVTCSGCGSHDHNIRTCPK 841
>05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-563327,
563716-566278
Length = 1016
Score = 31.5 bits (68), Expect = 0.52
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = -3
Query: 259 SQCHNCQLYGHSSRNCHARP----RCVKC-LGDHATALCARDQKTATEPPSCVLCRTQGH 95
S+C+ C+ GH +R+C + C KC H + C +E C C+ GH
Sbjct: 924 SECYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGSE---CFKCKQPGH 980
Query: 94 PANYRGCP 71
A R CP
Sbjct: 981 FA--RDCP 986
>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
Length = 726
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -3
Query: 253 CHNCQLYGHSSRNCHARPRCVKCL-GDHATALCARDQKTATEP 128
C C GH + NC RC CL H + CA A +P
Sbjct: 230 CVRCLDKGHIASNCSGPVRCHSCLEAGHMSCFCATRPTKAHQP 272
>01_01_0623 +
4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 31.1 bits (67), Expect = 0.68
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 SSEAVLAGDAAIYFRGSGATTVIRGVTL-CSTQDAARRFRRGFLVASAEGRGVIAQTLNT 196
S E L GD +Y G G+ ++ G L C V G VIA ++
Sbjct: 86 SEEVELGGD--VYITGEGSLVLLAGAALTCQRPGCVISANLSGEVRLGRGVRVIAGRVSL 143
Query: 197 SGARVTVTGRVPVQLTVMA 253
+ A VT+ V V T +A
Sbjct: 144 AAANVTIADTVVVNTTALA 162
>10_08_0605 +
19158167-19158309,19158726-19158834,19159099-19159224,
19159388-19159543,19159623-19159805,19159904-19160020,
19160528-19160581,19160661-19160732,19160947-19161058,
19161188-19161284,19161434-19161528,19162093-19162167,
19162307-19162390,19162602-19162700,19163167-19163207
Length = 520
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 157 ARDQKTATEPPSCVL-CRTQGHPANYRGCPRAP 62
A QK++ E PS ++ C GH ++ GCP+AP
Sbjct: 438 ASKQKSSKELPSYLIECSNCGHCSDLSGCPQAP 470
>09_02_0108 -
4358051-4358645,4358722-4359137,4360307-4360903,
4361068-4361139,4361236-4361370,4361485-4361585,
4362719-4362863
Length = 686
Score = 30.7 bits (66), Expect = 0.90
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Frame = -3
Query: 301 SGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPS 122
SG+ ++A KG ++ + G +S + P+C G + + +
Sbjct: 593 SGVGIDAESTKGAVAETETTDMVGIASTSVLLDPKCSNSKGRYKSEPRKKRLIDVIRSKG 652
Query: 121 CVLCRTQG-HPANYRGCP--RAPKINR 50
V C G H N R CP R K NR
Sbjct: 653 SVTCSGCGSHDHNIRTCPKKREVKCNR 679
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 496 QRGVRAPPGAYTYGNLYAPYGGKKRGPYGRP 588
Q G APP YG P GG +G YG P
Sbjct: 604 QSGYGAPPPQTGYGTQPQPQGGYSQGSYGAP 634
>06_01_0196 +
1520015-1520191,1520483-1520527,1521851-1521910,
1522246-1522358,1522432-1522642,1523087-1523133,
1523211-1523369,1523521-1523624,1524300-1524634
Length = 416
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = -3
Query: 196 CVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQNRLRAS 17
CVKC D + + + D C LCRT P P + AR++R S
Sbjct: 312 CVKCAMDLCSVIKSYDSAGIAGEIPCPLCRTGIASFRTTAAPPPPSLAGSPARRSRRNNS 371
Query: 16 G 14
G
Sbjct: 372 G 372
>06_03_0636 + 22983898-22985043
Length = 381
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 275 MGGFDSDTREPTDGLCVKDFLT 340
+GG+D +T PTD + V DFLT
Sbjct: 137 VGGWDPETWAPTDSVLVYDFLT 158
>01_05_0428 + 22060431-22060850
Length = 139
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 127 PSCVLCRTQGHPANYRGCPRAP 62
P C C QG P+ GCP AP
Sbjct: 10 PPCAACAHQGRPSCPAGCPLAP 31
>04_04_1553 - 34363848-34366058,34369087-34370451
Length = 1191
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = -1
Query: 360 LSSLPPRVRKSLTHRPSVGSLVSLSKPPIKKALLASAITVNCTGTLPVTVTRAPDVLSVW 181
L S PR R L +V +L+ +S P AL + N +L ++ PD L++
Sbjct: 21 LRSCSPR-RAVLRRARAVHALLVVSSTPSSPAL--TTFLANQLLSLYARLSAVPDALALL 77
Query: 180 AITPRPSALA 151
TPRPS ++
Sbjct: 78 RSTPRPSVVS 87
>01_06_1332 -
36379736-36379909,36380395-36380459,36380534-36380612,
36380794-36380868,36381106-36381609,36382046-36382246,
36383033-36383566
Length = 543
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -1
Query: 165 PSALATKKPRRNRLAASCVEHRVTPRITVVAPEPLK*IAASPAKTASELPAQTS 4
PSA AT P+ ++LAA+ V P P PL P+ T S+L A +S
Sbjct: 5 PSAAATASPQPDQLAAAAVSTPQNPN-----PNPLLSPQIPPSPTVSDLSAISS 53
>11_06_0690 + 26303733-26306540
Length = 935
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -3
Query: 280 PHKKGTPSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALCARDQKTATEP 128
P + +C C GH +C PRC +C + C D+ ++ P
Sbjct: 85 PIPRWLQGRCFCCLGLGHLKADCKGAPRCYRCWFSGYLERDCKFDRGPSSRP 136
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 340 GKKIFNTQTVCRLSG-IAVEAPHKKGTPSQCHNCQLYGHSSRNC 212
G+ + T C G +AV P +K C C L+GH+S+ C
Sbjct: 172 GETLLETCFNCGEEGHVAVNCPMEK-RKRPCFVCGLFGHNSKQC 214
>11_01_0179 -
1412391-1412863,1412947-1413412,1413504-1414551,
1414639-1414725,1416244-1416411,1416785-1416958,
1417662-1417720,1418132-1420154,1420549-1420647,
1420998-1421796,1422101-1422120,1422446-1422513
Length = 1827
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 285 STAIPESLQTVCVLKIFLPSGVGWRATRTILYGSLPR--PVCIRCTEFTGRP 434
S A ++T+C+L LPSG+ TR + + R +C+ C +F+G P
Sbjct: 775 SLANLHKIRTLCILGSALPSGI----TREACFVTPQRLGQLCLECFKFSGLP 822
>08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 134 RRGFLVASAEGRGVIAQTLN 193
RRG LV +++G+GV+ QT N
Sbjct: 996 RRGMLVRASDGKGVVYQTRN 1015
>03_05_0559 -
25610474-25610951,25611149-25611890,25612355-25612744,
25613041-25613099,25613186-25613326,25613449-25613545,
25614999-25615185
Length = 697
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 526 YTYGNLYAPYGGKKRGPYG 582
Y YG PYGG GPYG
Sbjct: 497 YMYGPAGMPYGGYPMGPYG 515
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Frame = -3
Query: 286 EAPHKKGTPSQCHNCQLYGHSSRNCHARPR---CVKC-LGDHATALCARDQKTATEPPSC 119
+ P K+G YGH P C C + H C +++KT C
Sbjct: 144 DKPSKRGQTGGRFTSGRYGHGPVEGETPPPGYVCRSCGVPGHFIQHCQQERKTPPSGYVC 203
Query: 118 VLCRTQGHPANYRGCP 71
CR GH ++ CP
Sbjct: 204 YRCRIPGHFIHH--CP 217
>02_05_0906 +
32662199-32662376,32662506-32662615,32662776-32662894,
32662982-32663072
Length = 165
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 279 PIKKALLASAIT-VNCTGTLPVTVTRAPDV 193
P+K+ALL S V T PVTV RAP V
Sbjct: 133 PLKRALLGSVSNYVVNNATCPVTVVRAPTV 162
>12_02_0814 -
23410278-23411854,23411933-23412166,23412688-23412725,
23412872-23412948
Length = 641
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/43 (27%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Frame = -3
Query: 253 CHNCQLYGHSSRNCHARPRCVKC-LGDHATALCARDQKTATEP 128
C NC GH C RC C H C + +P
Sbjct: 132 CFNCLGLGHQKSACPGSTRCYNCWYSGHIARNCPTSRAARAQP 174
>08_02_1422 - 26971803-26971900,26974083-26975061
Length = 358
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/98 (23%), Positives = 41/98 (41%)
Frame = -3
Query: 586 DDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHR 407
D+ + SS L + + H Y L E +V G K D+ + D P+ +
Sbjct: 117 DNGESWSSSLEQVPLP-HVYPLPVIEEFGIVPNG-GKHFDLAALVVDYRS---PMKCSYS 171
Query: 406 MHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGI 293
MH ++ V+ + P PE +K+ T+ + G+
Sbjct: 172 MHIYSSKDTNWRVIPMVDPYPEVRKVIATKVITIAEGV 209
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 253 CHNCQLYGHSSRNCHARPRCVKCLG 179
C NC + GH RNC A +C G
Sbjct: 110 CFNCGMEGHWHRNCTAGDWTNRCYG 134
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = -3
Query: 259 SQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHP-ANY 83
++C+ C GH RNC PR ++ ++ + R + + S R++ + +
Sbjct: 124 NKCYRCGERGHIERNCQNSPRNLRRERSYSCSPSPRRGRGRSRSYSRSRSRSRSYSRSRS 183
Query: 82 RGCPRAPKINRRVARQNRLRAS 17
R +P+ R + R L S
Sbjct: 184 RSLSGSPRARRELERSRSLSYS 205
>03_05_0563 -
25651529-25651621,25651712-25651790,25651875-25651920,
25652001-25652264,25652361-25652484,25652727-25652780,
25653589-25653657,25653752-25654021
Length = 332
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -1
Query: 309 VGSLV---SLSKPPIKKALLASAITVNCTGTLPVTVTRAPDVLSVWAITPRPSALATKK 142
VGS V ++SKPPI+K L+S IT +T P ++S A R S AT K
Sbjct: 166 VGSTVQEGTVSKPPIQKYALSSHITPR------LTPEATPKIMSTSASPRRMSTTATPK 218
>03_02_0918 + 12381662-12383118,12383249-12384707
Length = 971
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Frame = -1
Query: 360 LSSLPPRVRKSLTHRPSVGSL--------VSLSKPPIKKALLASAITVNCTGTLPVTVTR 205
LS LP VR +++H G L + LS L + + +C G LP +
Sbjct: 525 LSDLPHLVRFNISHNQLSGDLPPGSFFDTIPLSSVSDNPGLCGAKLNSSCPGVLPKPIVL 584
Query: 204 APDVLS--VWAITPRPSALATKK 142
PD S + P P+ L KK
Sbjct: 585 NPDSSSDPLSQPEPTPNGLRHKK 607
>01_01_0208 + 1780275-1781123
Length = 282
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 318 RPSVGSLVSLSKPPIKKALLASAITVNCTGTLPVTVTRAPDVLSVWAIT-PRPSALATKK 142
RP+V S S PP ++A A A ++ VT+T V+A+T RP ++
Sbjct: 123 RPAVAPASSASPPPERRAARARAEALD-RARFSVTLTSEEIEEDVYAVTGARPRRRPRRR 181
Query: 141 PR 136
PR
Sbjct: 182 PR 183
>11_06_0466 + 23903000-23904041,23905282-23905672,23905708-23906188
Length = 637
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 307 RLSGIAVEAPH-KKGTPSQCHNCQLYGHSSRNCHAR 203
R++ VE H ++G P+ H L+ H +CHAR
Sbjct: 587 RVAAGEVEDGHGERGVPTCDHGFPLHSHGDCSCHAR 622
>08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150
Length = 383
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 262 PSQCHNCQLYGHSSRNCHAR 203
P +C C +GH++R C AR
Sbjct: 19 PRRCSQCGHHGHNARTCTAR 38
>06_03_0046 - 15852653-15854560
Length = 635
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 262 PSQCHNCQLYGHSSRNCHARP 200
P CH+C GH +R C RP
Sbjct: 245 PVWCHSCLEAGHMARFCATRP 265
>05_04_0376 -
20754386-20755392,20755683-20756320,20756433-20756627,
20757730-20757795,20757942-20758007,20758402-20758445
Length = 671
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 276 WGASTAIPESLQTVCVLKIFLPSGVGW 356
W +PE LQ+ C+L+ L +G+ W
Sbjct: 586 WKVHDNMPEKLQSYCLLRSKLKAGLEW 612
>04_03_0744 +
19237901-19237912,19238119-19238611,19238860-19238928,
19239124-19239140,19239260-19239357,19240019-19240156,
19240710-19240899,19241175-19241307,19241505-19242442
Length = 695
Score = 27.5 bits (58), Expect = 8.4
Identities = 26/93 (27%), Positives = 41/93 (44%)
Frame = +2
Query: 29 AVLAGDAAIYFRGSGATTVIRGVTLCSTQDAARRFRRGFLVASAEGRGVIAQTLNTSGAR 208
A L G G A VI + +CST D + F+ G+L S+ I+Q + +
Sbjct: 476 ASLVGSDGGVIAGLAACGVIMSI-VCSTADLMQDFKSGYLTLSSPRSMFISQMIGVA--- 531
Query: 209 VTVTGRVPVQLTVMALARSAFFMGGFDSDTREP 307
G + LT+ L +AF +G D + + P
Sbjct: 532 ---LGCIIAPLTLW-LFWTAFDIGDPDGEYKAP 560
>02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608
Length = 375
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 260 RSAFFMGGFDSDTREPTDGLCVKDFLT 340
R +GG+D +T PTD + V DFL+
Sbjct: 72 RRLVVVGGWDPETWAPTDAVHVYDFLS 98
>01_07_0238 +
42209407-42209964,42210039-42210561,42212577-42212665,
42212981-42213191,42213265-42213446,42213573-42213812,
42214691-42214878,42215230-42215323,42215407-42215463,
42215552-42215686,42216460-42216525,42216745-42216858,
42217849-42218010,42218093-42218221,42218323-42218424,
42219428-42219504,42219600-42219957
Length = 1094
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = -3
Query: 529 YTLQEERELRVVIRGIPKELDVELVKADLL-EQGLPVNSVHRMHTGRGREPY---NMVLV 362
Y+L E+ +++ GI +LD E+++ LL Q L V+ + ++ + N ++V
Sbjct: 719 YSLARLDEIMMLLHGIKADLDNEVLEGQLLCYQYLLVHMIKANEENTSKKAFLILNELIV 778
Query: 361 ALQPTPEGKKI 329
AL+ E +++
Sbjct: 779 ALKSKKESRRL 789
>01_01_0353 - 2802779-2802794,2802901-2802962,2803458-2803844
Length = 154
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 297 VSLSKPPIKKALLASAITVNCTGTLPVTVTR-APDVLSVWAITPRPSALAT 148
+S+S + +L A T T V+V AP++ VWA+TP + LA+
Sbjct: 6 LSVSGILARHPVLFYAATWTAVATAAVSVAAFAPELAFVWAVTPGAAPLAS 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,221,440
Number of Sequences: 37544
Number of extensions: 419342
Number of successful extensions: 1435
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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