Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4446
(588 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 96 4e-20
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 89 5e-18
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 89 5e-18
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 84 1e-16
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 81 8e-16
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 81 8e-16
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 81 8e-16
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 80 2e-15
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 80 2e-15
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 80 2e-15
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 79 4e-15
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 76 3e-14
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 76 3e-14
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 70 2e-12
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 60 3e-09
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 54 2e-07
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 54 2e-07
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 46 5e-05
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 40 0.002
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 40 0.002
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 40 0.002
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 33 0.22
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 32 0.66
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 30 2.0
AY089589-1|AAL90327.1| 247|Drosophila melanogaster RE16411p pro... 29 3.5
AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p pro... 29 3.5
AY058390-1|AAL13619.1| 640|Drosophila melanogaster GH15748p pro... 29 3.5
AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5... 29 3.5
AE014298-825|AAF46105.1| 362|Drosophila melanogaster CG6048-PA ... 29 3.5
AE014296-2033|AAF50007.2| 417|Drosophila melanogaster CG10361-P... 29 3.5
AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-P... 29 3.5
AY058354-1|AAL13583.1| 550|Drosophila melanogaster GH12682p pro... 29 4.7
AE014134-1183|AAN10603.1| 708|Drosophila melanogaster CG10806-P... 29 4.7
AE014134-1182|AAF52449.2| 715|Drosophila melanogaster CG10806-P... 29 4.7
AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein. 29 6.2
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 95.9 bits (228), Expect = 4e-20
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 5/175 (2%)
Frame = -3
Query: 577 RALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVH---- 410
R + ++L E FH Y L+E+R RV ++G+ +K +L + G V +H
Sbjct: 175 RTIVNWLEIEEYEFHCYQLKEDRPYRVCVKGLHHSTLHHQIKDELEKIGHKVLDIHTPLR 234
Query: 409 RMHTGRGR-EPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQCHNCQLY 233
R G + P NM + + K+I + +C + + +E K+ QCH CQ
Sbjct: 235 RNEPGTSKASPVNMFFLNIAAAANNKEILAVKALCHMR-VVIEPLRKRNAIVQCHRCQQI 293
Query: 232 GHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANYRGCPR 68
GH+++ C CVKC G+H C R + E +C C Q HPANY+GC +
Sbjct: 294 GHTAKYCRKAHICVKCAGEHPAKDCTRPR---IELCTCYNCGGQ-HPANYKGCSK 344
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 88.6 bits (210), Expect = 5e-18
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Frame = -3
Query: 583 DHRALSSYLRKERISFHTYTLQEERELRVVIRGI-----PKELDVELVKADLLEQGLPVN 419
DHR ++ YL +++TY L+ + L+VV++GI P E+ +E +KA +N
Sbjct: 270 DHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEI-IEALKAKNFSAKTAIN 328
Query: 418 SVHRMHTGRGREPYNMVLVALQPTPEGKK------IFNTQTVCRLSGIAVEAPHKKGTPS 257
+++ + P + + L+P + K I+N Q + I VE PHK+ P
Sbjct: 329 ILNK-----DKVPQPLFKIELEPELQALKKNEVHPIYNLQYLLHRR-ITVEEPHKRINPV 382
Query: 256 QCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANYRG 77
QC NCQ YGH+ C + CV C H TA C ++ K C C + H ANYRG
Sbjct: 383 QCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKN-KDDKSVKKCSNCGEK-HTANYRG 440
Query: 76 C----PRAPKINRRVA 41
C ++N+R+A
Sbjct: 441 CVVYKELKSRLNKRIA 456
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 88.6 bits (210), Expect = 5e-18
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Frame = -3
Query: 583 DHRALSSYLRKERISFHTYTLQEERELRVVIRGI-----PKELDVELVKADLLEQGLPVN 419
DHR ++ YL +++TY L+ + L+VV++GI P E+ +E +KA +N
Sbjct: 114 DHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEI-IEALKAKNFSAKTAIN 172
Query: 418 SVHRMHTGRGREPYNMVLVALQPTPEGKK------IFNTQTVCRLSGIAVEAPHKKGTPS 257
+++ + P + + L+P + K I+N Q + I VE PHK+ P
Sbjct: 173 ILNK-----DKVPQPLFKIELEPELQALKKNEVHPIYNLQYLLHRR-ITVEEPHKRINPV 226
Query: 256 QCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANYRG 77
QC NCQ YGH+ C + CV C H TA C ++ K C C + H ANYRG
Sbjct: 227 QCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKN-KDDKSVKKCSNCGEK-HTANYRG 284
Query: 76 C----PRAPKINRRVA 41
C ++N+R+A
Sbjct: 285 CVVYKELKSRLNKRIA 300
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 84.2 bits (199), Expect = 1e-16
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Frame = -3
Query: 586 DDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHR 407
D H A+ + L + I H++ + + ++VIR + + + +++ L + G+ +
Sbjct: 683 DAHNAIQNVLLEANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQDIGIATKFIRA 742
Query: 406 MHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGT--PSQCHNCQLY 233
M R P + V + P +G + + L G V+ K+ + P+QCH CQ +
Sbjct: 743 MQFRDTRNPMRIHEVEVVPKADGSHL-KVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCF 801
Query: 232 GHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKIN 53
GH+ C +C+KC HAT C + + P +C C H ++Y+GCP +
Sbjct: 802 GHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSYKGCPAFQEAK 857
Query: 52 RRVA 41
+R++
Sbjct: 858 QRLS 861
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 81.4 bits (192), Expect = 8e-16
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Frame = -3
Query: 586 DDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHR 407
D ++A+ + L I H++ + + ++VIR + + + +++ L + G+ +
Sbjct: 606 DAYKAIQNVLLGANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQDIGIATKFIRA 665
Query: 406 MHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGT--PSQCHNCQLY 233
M R P + V + P +G + + L G V+ K+ + P+QCH CQ +
Sbjct: 666 MQFRDTRNPMRIHEVEVVPKADGSHL-KVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCF 724
Query: 232 GHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKIN 53
GH+ C +C+KC HAT C + + P +C C H ++Y+GCP +
Sbjct: 725 GHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSYKGCPAFQEAK 780
Query: 52 RRVA 41
+R++
Sbjct: 781 QRLS 784
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 81.4 bits (192), Expect = 8e-16
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Frame = -3
Query: 520 QEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPE 341
+ ER RVVIR + + +LL+ G V M P M V + +
Sbjct: 566 KSERGFRVVIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIAMAKD 625
Query: 340 GK--KIFNTQTVCRLSGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT 167
G KI + + + + +E ++ P QC+ CQ + H+ +C PRC+KC GDH +
Sbjct: 626 GSHDKIISLKQIGG-QRVDIERKNRTREPVQCYRCQGFRHAKNSCMKPPRCMKCAGDHLS 684
Query: 166 ALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQN 32
+ C + + T P +CV C + H + Y+GCP +++A N
Sbjct: 685 SCCTKPRST---PATCVNCSGE-HISAYKGCPTYKAEKQKLAANN 725
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 81.4 bits (192), Expect = 8e-16
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Frame = -3
Query: 586 DDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHR 407
D ++A+ + L I H++ + + ++VIR + + + +++ L + G+ +
Sbjct: 606 DAYKAIQNVLLGANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQDIGIATKFIRA 665
Query: 406 MHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGT--PSQCHNCQLY 233
M R P + V + P +G + + L G V+ K+ + P+QCH CQ +
Sbjct: 666 MQFRDTRNPMRIHEVEVVPKADGSHL-KVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCF 724
Query: 232 GHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKIN 53
GH+ C +C+KC HAT C + + P +C C H ++Y+GCP +
Sbjct: 725 GHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSYKGCPAFQEAK 780
Query: 52 RRVA 41
+R++
Sbjct: 781 QRLS 784
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 80.2 bits (189), Expect = 2e-15
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = -3
Query: 520 QEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPE 341
+ ER RV+IR + + +LL+ G V M P M V + +
Sbjct: 558 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKD 617
Query: 340 GK--KIFNTQTVCRLSGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT 167
G KI + + + + +E ++ P QC+ CQ + H+ +C PRC+KC G+H +
Sbjct: 618 GSHDKILSLKQIGG-QRVDIERKNRTRDPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLS 676
Query: 166 ALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQN 32
+ C K T P +CV C Q H + Y+GCP +++A N
Sbjct: 677 SCCT---KPRTTPATCVNCSGQ-HISAYKGCPTYKAEKQKLAANN 717
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 80.2 bits (189), Expect = 2e-15
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = -3
Query: 520 QEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPE 341
+ ER RV+IR + + +LL+ G V M P M V + +
Sbjct: 536 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKD 595
Query: 340 GK--KIFNTQTVCRLSGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT 167
G KI + + + + +E ++ P QC+ CQ + H+ +C PRC+KC G+H +
Sbjct: 596 GSHDKILSLKQIGG-QRVDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLS 654
Query: 166 ALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQN 32
+ C K T P +CV C Q H + Y+GCP +++A N
Sbjct: 655 SCCT---KPRTTPATCVNCSGQ-HISAYKGCPAYKAEKQKLAANN 695
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 80.2 bits (189), Expect = 2e-15
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Frame = -3
Query: 586 DDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHR 407
D + A+ + L + I H++ + + ++VIR + + + +++ L + G+ +
Sbjct: 683 DAYNAIQNVLLEANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQDIGIATKFIRA 742
Query: 406 MHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGT--PSQCHNCQLY 233
M R P + V + P +G + + L G V+ K+ + P+QCH CQ +
Sbjct: 743 MQFRDTRNPMRIHEVEVVPKADGSHL-KVLLIKSLGGQTVKVERKRVSKDPTQCHRCQCF 801
Query: 232 GHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKIN 53
GH+ C +C+KC HA+ C + + P +C C H ++Y+GCP +
Sbjct: 802 GHTKNYCRNPFKCMKCGQLHASVSCTKPKNL---PATCANC-NGSHVSSYKGCPVFQEAK 857
Query: 52 RRVA 41
+R++
Sbjct: 858 QRLS 861
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 79.0 bits (186), Expect = 4e-15
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Frame = -3
Query: 520 QEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHRMH---TGRGREPYNMVLVALQP 350
+ ER RV+IR + + +LL+ G M TG + + +V +
Sbjct: 573 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFARNMTNPATGGPMRMFEVEIVMAKD 632
Query: 349 TPEGKKIFNTQTVCRLSGIAVEAPHKKGT--PSQCHNCQLYGHSSRNCHARPRCVKCLGD 176
+ GK I ++ +L G V+ K T P QC+ CQ + HS +C PRC+KC G
Sbjct: 633 SSHGKII----SLKQLGGQRVDIERKNRTREPVQCYRCQGFRHSKNSCMRPPRCMKCAGG 688
Query: 175 HATALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQN 32
H ++ C K T P +CV C + H + Y+GCP R++A N
Sbjct: 689 HLSSCCT---KPRTTPATCVNCSGE-HISAYKGCPAYKTEKRKLAVNN 732
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 76.2 bits (179), Expect = 3e-14
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Frame = -3
Query: 520 QEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPE 341
+ ER RV+IR + + +LL+ G V M P M V + +
Sbjct: 151 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKD 210
Query: 340 GK--KIFNTQTVCRLSGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT 167
G KI + + + + +E ++ P QC+ CQ + H+ +C PRC+K G+H +
Sbjct: 211 GSHDKILSLKQIGG-QRVDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLS 269
Query: 166 ALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQN 32
+ C K T P +CV C Q H + Y+GCP +++A N
Sbjct: 270 SCCT---KPRTTPATCVNCSGQ-HISAYKGCPAYKAEKQKLAANN 310
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 76.2 bits (179), Expect = 3e-14
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Frame = -3
Query: 520 QEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPE 341
+ ER RV+IR + + +LL+ G V M P M V + +
Sbjct: 151 KSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKD 210
Query: 340 GK--KIFNTQTVCRLSGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT 167
G KI + + + + +E ++ P QC+ CQ + H+ +C PRC+K G+H +
Sbjct: 211 GSHDKILSLKQIGG-QRVDIERKNRTREPVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLS 269
Query: 166 ALCARDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQN 32
+ C K T P +CV C Q H + Y+GCP +++A N
Sbjct: 270 SCCT---KPRTTPATCVNCSGQ-HISAYKGCPAYKAEKQKLAANN 310
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/92 (41%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -3
Query: 295 IAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCV 116
I VE PHK+ P QC NCQ YGH+ C P CV C H + C +++ A E C
Sbjct: 26 ITVEEPHKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQCQINKENACE-KKCN 84
Query: 115 LCRTQGHPANYRGCPRAPKINRRV-ARQNRLR 23
C H ANYRGCP ++ R+ R N R
Sbjct: 85 NC-GGNHTANYRGCPIYKELKIRLHKRMNTAR 115
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 59.7 bits (138), Expect = 3e-09
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -3
Query: 262 PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCRTQGHPANY 83
P+QCH CQ +GH+ C +C+KC HAT C + + P +C C H ++Y
Sbjct: 2 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCTKPKNL---PATCANC-NGSHVSSY 57
Query: 82 RGCPRAPKINRRVA 41
+GCP + +R++
Sbjct: 58 KGCPAFQEAKQRLS 71
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 53.6 bits (123), Expect = 2e-07
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 18/205 (8%)
Frame = -3
Query: 586 DDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQG-------- 431
D R L K F + L+EE+ RVV++GI + ++ + G
Sbjct: 245 DAFRTAVKELNKLNCQFWHHQLKEEKPYRVVLKGIHANVPSSQIEQAFSDHGYEVLNIYC 304
Query: 430 --------LPVNSVHRMHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPH 275
+ VN T + N+ + L+ P K+ + R + VE
Sbjct: 305 PRKSDWKNIQVNEDDNEATKNFKTRQNLFYINLKQGPNVKESLKITRLGRYR-VTVERAT 363
Query: 274 KKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT--ALCARDQKTATEPPSCVLCRTQ 101
++ QC CQ++GHS C P C KC G H T ALC D C+ C
Sbjct: 364 RRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISDVCL------CINCGGD 417
Query: 100 GHPANYRGCPRAPKINRRVARQNRL 26
H + + CP + +++ ++RL
Sbjct: 418 -HVSTDKSCPVRAEKAKKLKPRSRL 441
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 53.6 bits (123), Expect = 2e-07
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 18/205 (8%)
Frame = -3
Query: 586 DDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELVKADLLEQG-------- 431
D R L K F + L+EE+ RVV++GI + ++ + G
Sbjct: 279 DAFRTAVKELNKLNCQFWHHQLKEEKPYRVVLKGIHANVPSSQIEQAFSDHGYEVLNIYC 338
Query: 430 --------LPVNSVHRMHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPH 275
+ VN T + N+ + L+ P K+ + R + VE
Sbjct: 339 PRKSDWKNIQVNEDDNEATKNFKTRQNLFYINLKQGPNVKESLKITRLGRYR-VTVERAT 397
Query: 274 KKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHAT--ALCARDQKTATEPPSCVLCRTQ 101
++ QC CQ++GHS C P C KC G H T ALC D C+ C
Sbjct: 398 RRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISDVCL------CINCGGD 451
Query: 100 GHPANYRGCPRAPKINRRVARQNRL 26
H + + CP + +++ ++RL
Sbjct: 452 -HVSTDKSCPVRAEKAKKLKPRSRL 475
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 45.6 bits (103), Expect = 5e-05
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 262 PSQCHNCQLYGHSSRNCHARPRCVKC-LGDHATALCARDQKTATEPPSCVLCRTQGHPAN 86
P +C +CQL GH+S++C P CV C L H C R C C Q HPA+
Sbjct: 201 PMRCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCTR--------IFCANCTGQ-HPAS 251
Query: 85 YRGCPR 68
CP+
Sbjct: 252 SPECPQ 257
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -3
Query: 256 QCHNCQLYGHSSRNC-HARPRCVKCLG-DHATALCARDQKTATEPPSCVLCRTQGHPANY 83
+C+ C +GH +R C RC +C G H + C T + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTGHWV-- 108
Query: 82 RGCPRAPKINRR 47
R CP A +N R
Sbjct: 109 RNCPEA--VNER 118
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -3
Query: 256 QCHNCQLYGHSSRNC-HARPRCVKCLG-DHATALCARDQKTATEPPSCVLCRTQGHPANY 83
+C+ C +GH +R C RC +C G H + C T + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTGHWV-- 108
Query: 82 RGCPRAPKINRR 47
R CP A +N R
Sbjct: 109 RNCPEA--VNER 118
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -3
Query: 256 QCHNCQLYGHSSRNC-HARPRCVKCLG-DHATALCARDQKTATEPPSCVLCRTQGHPANY 83
+C+ C +GH +R C RC +C G H + C T + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTGHWV-- 108
Query: 82 RGCPRAPKINRR 47
R CP A +N R
Sbjct: 109 RNCPEA--VNER 118
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -3
Query: 253 CHNCQLYGHSSRNCHARPRCVKCLGDHATAL-----CARDQKTATEPPSCVLCRTQGHPA 89
C NC GH R+C + C C G H T L + + ++T PP+ L R A
Sbjct: 464 CLNCFARGHQLRDCTSMHSCFTCKGRHHTLLHRSPPNSENASSSTSPPTQQLPRPSSRNA 523
Query: 88 N 86
+
Sbjct: 524 S 524
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 253 CHNCQLYGHSSRNCHARPRCVKCLGD 176
C C +GH ++ C A PRC+ C D
Sbjct: 431 CLRCGEHGHKAKGCVAPPRCLICSSD 456
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -3
Query: 262 PSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSCVLCR 107
P +C C +GH + C + C+ C T D + T +C+ CR
Sbjct: 185 PLRCKKCLRFGHPTPICKSVETCINCSETKHT----NDGEKCTNEKNCLNCR 232
>AY089589-1|AAL90327.1| 247|Drosophila melanogaster RE16411p
protein.
Length = 247
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 FDVWAGSSEAVLAGDAAIYFRGSGATTVIRGVTLCSTQDAARRFR-RGFLVASAEGRGVI 178
FD AG EA+L + A++ ++I G+ LC + R R G L +
Sbjct: 134 FDANAGIFEAILTPEDAVFSDELNHASIIDGIRLCKAKKQRYRHRDLGDLEEQLKASDAR 193
Query: 179 AQTLNTSGARVTVTGRVPVQLTVMALAR 262
+ + T G ++ G + ++ LAR
Sbjct: 194 LKLIATDGV-FSMDGNIAPLARIVELAR 220
>AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p
protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -3
Query: 376 NMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQ---CHNCQLYGHSSRNC 212
N V V PTP+ +++ +T L+ + GT + C+NC HS R C
Sbjct: 699 NAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQTHSGREC 756
>AY058390-1|AAL13619.1| 640|Drosophila melanogaster GH15748p
protein.
Length = 640
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -3
Query: 376 NMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQ---CHNCQLYGHSSRNC 212
N V V PTP+ +++ +T L+ + GT + C+NC HS R C
Sbjct: 529 NAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQTHSGREC 586
>AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5C
protein.
Length = 1081
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -3
Query: 265 TPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCARDQKTATEPPSC 119
TPS+ CQ G S R CH R + G++ C T PSC
Sbjct: 101 TPSEIAMCQAKGQSERWCHNYVRVLHSYGENQLYACG----TNAFQPSC 145
>AE014298-825|AAF46105.1| 362|Drosophila melanogaster CG6048-PA
protein.
Length = 362
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +3
Query: 306 LQTVCVLKIFLPSGVGWRATRTILYGSLPRPVCIRCTEFTGRPCSNRSAFTSSTSNSLGI 485
L V +L IFLPSG+ TRT L RP R GR + A +T + +GI
Sbjct: 7 LLAVALLLIFLPSGLRGATTRTHLDTKAIRP---RFNADPGRIINGTEASLGATRHQVGI 63
>AE014296-2033|AAF50007.2| 417|Drosophila melanogaster CG10361-PA
protein.
Length = 417
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 FDVWAGSSEAVLAGDAAIYFRGSGATTVIRGVTLCSTQDAARRFR-RGFLVASAEGRGVI 178
FD AG EA+L + A++ ++I G+ LC + R R G L +
Sbjct: 134 FDANAGIFEAILTPEDAVFSDELNHASIIDGIRLCKAKKQRYRHRDLGDLEEQLKASDAR 193
Query: 179 AQTLNTSGARVTVTGRVPVQLTVMALAR 262
+ + T G ++ G + ++ LAR
Sbjct: 194 LKLIATDGV-FSMDGNIAPLARIVELAR 220
>AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-PA
protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -3
Query: 376 NMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQ---CHNCQLYGHSSRNC 212
N V V PTP+ +++ +T L+ + GT + C+NC HS R C
Sbjct: 699 NAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQTHSGREC 756
>AY058354-1|AAL13583.1| 550|Drosophila melanogaster GH12682p
protein.
Length = 550
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 252 AITVNCTGTLPVTVTRAPDVLSVWAITPRPS 160
AI ++ TGT +T T+ P LS W + RPS
Sbjct: 477 AIMISVTGTKLLTKTKQPQDLSGWRRSHRPS 507
>AE014134-1183|AAN10603.1| 708|Drosophila melanogaster CG10806-PB,
isoform B protein.
Length = 708
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 252 AITVNCTGTLPVTVTRAPDVLSVWAITPRPS 160
AI ++ TGT +T T+ P LS W + RPS
Sbjct: 635 AIMISVTGTKLLTKTKQPQDLSGWRRSHRPS 665
>AE014134-1182|AAF52449.2| 715|Drosophila melanogaster CG10806-PA,
isoform A protein.
Length = 715
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 252 AITVNCTGTLPVTVTRAPDVLSVWAITPRPS 160
AI ++ TGT +T T+ P LS W + RPS
Sbjct: 642 AIMISVTGTKLLTKTKQPQDLSGWRRSHRPS 672
>AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Frame = -1
Query: 360 LSSLPPRVRK---SLTHRPSVGSLVS--LSKPPIKKALLASAITVNCTGTLPVTVTRAPD 196
+SSLPP V S T + + + S + K +A T T T T T+ P
Sbjct: 393 ISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTATTTKATTTKRTTTTKKPT 452
Query: 195 VLSVWAITPRPSALATKKPRRNRLAASCVEHRVTPRITV 79
S TP+P+ + P+ S T T+
Sbjct: 453 TTST---TPKPTTTTSTTPKSTTSTTSTTSTTPTTTTTI 488
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,582,687
Number of Sequences: 53049
Number of extensions: 661083
Number of successful extensions: 2327
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2301
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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