Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4436
         (510 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160           27   6.6  
03_06_0744 + 35910512-35910569,35911145-35911325,35912332-359124...    27   6.6  
05_01_0458 + 3630218-3630274,3630383-3630507,3630635-3630710,363...    27   8.8  

>08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160
          Length = 749

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 489 WVPGPPSSFFSVLRISKWLSEYIIIMN 409
           W+P PPS  F  LR     SE+ I+ N
Sbjct: 578 WLPVPPSRVFDFLRDDSTRSEWDILSN 604


>03_06_0744 +
           35910512-35910569,35911145-35911325,35912332-35912419,
           35912541-35912726,35913591-35913725,35913803-35913862,
           35914609-35914698,35915384-35915515,35916039-35916183,
           35916266-35916439,35916629-35916692,35916778-35916847,
           35917328-35917445,35918258-35918280,35918398-35918499,
           35919831-35920250,35920327-35920563
          Length = 760

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -2

Query: 341 TL*TRRHKCFTAKNRLNSRSYLY*LATSVRQHQLRKIYKKKT 216
           TL T+RH    A+    S      LA+S+ + +LRKI +K+T
Sbjct: 592 TLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEKET 633


>05_01_0458 +
           3630218-3630274,3630383-3630507,3630635-3630710,
           3630884-3630985,3631075-3631290,3632217-3632297,
           3633152-3633235,3633405-3633509,3634338-3634516,
           3634681-3634765,3634889-3635090,3635165-3635234,
           3635353-3635422,3635745-3635834,3636020-3636088,
           3636520-3636618,3636804-3636914
          Length = 606

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 328 LVQRVDNPLYNGIETWSSCLKVIRSI 405
           + +R+ + L NGI+TW+  L V R++
Sbjct: 118 VAKRIQDMLVNGIKTWAPILPVKRAV 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,530,653
Number of Sequences: 37544
Number of extensions: 213539
Number of successful extensions: 436
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)