Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4432
         (333 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013590-1|AAH13590.1|  721|Homo sapiens eukaryotic translation ...    30   1.5  
AK091646-1|BAC03712.1|  721|Homo sapiens protein ( Homo sapiens ...    30   1.5  
AK125779-1|BAC86286.1|  128|Homo sapiens protein ( Homo sapiens ...    28   6.0  

>BC013590-1|AAH13590.1|  721|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 5 epsilon, 82kDa protein.
          Length = 721

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 143 DRKLFALNNTQE--VYQIFRLLMFDFAGEAM-GDSVQDTEQLVCWECLTIMKKFLKFKW 310
           DR+ F ++  Q   +  +  + + D+  E +    VQ+T    CW+   I +  LK KW
Sbjct: 53  DRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLLKSKW 111


>AK091646-1|BAC03712.1|  721|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34327 fis, clone FEBRA2009022, highly similar to
           TRANSLATION INITIATION FACTOR EIF-2B EPSILON SUBUNIT. ).
          Length = 721

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 143 DRKLFALNNTQE--VYQIFRLLMFDFAGEAM-GDSVQDTEQLVCWECLTIMKKFLKFKW 310
           DR+ F ++  Q   +  +  + + D+  E +    VQ+T    CW+   I +  LK KW
Sbjct: 53  DRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLLKSKW 111


>AK125779-1|BAC86286.1|  128|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43791 fis, clone TESTI2053526. ).
          Length = 128

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -3

Query: 313 CPFEFQELLHNC*ALPADELLSILN*ISHSFTREIEHQQTKNLIHFLGVIQS 158
           CP  F  LLH+   LP D + S LN     F+  ++  Q  +  +F+  + S
Sbjct: 68  CPVLFSSLLHSIPRLPQDRVASALN---EFFSPGLQGPQRSSSYYFMDCMNS 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,200,946
Number of Sequences: 237096
Number of extensions: 769942
Number of successful extensions: 1288
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)