Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4432
         (333 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66565-3|CAA91479.1|  177|Caenorhabditis elegans Hypothetical pr...    26   5.7  
AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical ...    26   5.7  
Z66513-6|CAA91335.1|  565|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z46676-1|CAA86661.1|  799|Caenorhabditis elegans Hypothetical pr...    26   7.5  
X16473-1|CAA34493.1|  799|Caenorhabditis elegans zyg-11 protein ...    26   7.5  
AF045644-2|AAC02600.1|  454|Caenorhabditis elegans Hypothetical ...    25   10.0 

>Z66565-3|CAA91479.1|  177|Caenorhabditis elegans Hypothetical
           protein T04F8.3 protein.
          Length = 177

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 117 ILKLLSTSCSILIENNFY*NWGFLNLLFRYQN 22
           ++KLL   CSIL  N F+  + FL+  F Y N
Sbjct: 126 VMKLLIDPCSILEYNFFFLQFSFLSSYF-YSN 156


>AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical
           protein C29G2.5 protein.
          Length = 391

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +3

Query: 3   FGTRAFCFDIEIINSKNPSFNKSYFQLKWSKTSTITLKSSAVHAC 137
           F T+  C+    +  KNP   ++Y  +  + T+TI       H C
Sbjct: 300 FSTQYLCYLFNPMLGKNPDMYQNYMVVVNNTTATILTTGMYFHLC 344


>Z66513-6|CAA91335.1|  565|Caenorhabditis elegans Hypothetical
           protein F54D5.9 protein.
          Length = 565

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 146 RKLFALNNTQEVYQIFRLLMFDFAGEAMGDSVQDTEQL 259
           R L  ++NT  ++QI   L  D A E + D +++ EQL
Sbjct: 527 RLLTDISNTVVLHQIGFQLPNDLAAELVNDPLEEEEQL 564


>Z46676-1|CAA86661.1|  799|Caenorhabditis elegans Hypothetical
           protein C08B11.1 protein.
          Length = 799

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +1

Query: 259 RLLGVLNNYEEVPEIQMGR 315
           ++LG+LNN  EV E+ +G+
Sbjct: 598 KVLGILNNLAEVEELHLGQ 616


>X16473-1|CAA34493.1|  799|Caenorhabditis elegans zyg-11 protein
           protein.
          Length = 799

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +1

Query: 259 RLLGVLNNYEEVPEIQMGR 315
           ++LG+LNN  EV E+ +G+
Sbjct: 598 KVLGILNNLAEVEELHLGQ 616


>AF045644-2|AAC02600.1|  454|Caenorhabditis elegans Hypothetical
           protein F57H12.4 protein.
          Length = 454

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 146 RKLFALNNTQEVYQIFRLLM 205
           RK+F +  T+ V++IFR +M
Sbjct: 433 RKIFLIVTTENVFKIFRFIM 452


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,369,016
Number of Sequences: 27780
Number of extensions: 134305
Number of successful extensions: 321
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)