Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4420
         (387 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150171-1|AAI50172.1| 1298|Homo sapiens ZNF536 protein protein.       29   6.9  
BC146757-1|AAI46758.1| 1300|Homo sapiens zinc finger protein 536...    29   6.9  
BC132722-1|AAI32723.1| 1300|Homo sapiens zinc finger protein 536...    29   6.9  
BC132720-1|AAI32721.1| 1300|Homo sapiens zinc finger protein 536...    29   6.9  
AB046863-1|BAB13469.1|  993|Homo sapiens KIAA1643 protein protein.     29   6.9  
AB002388-1|BAA20844.2| 1312|Homo sapiens KIAA0390 protein.             29   6.9  

>BC150171-1|AAI50172.1| 1298|Homo sapiens ZNF536 protein protein.
          Length = 1298

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPDCLWDCGHVLRTY-TGVVHARFHAR 118
           K  P    DCG V RTY   VVH+R H R
Sbjct: 627 KEKPTECPDCGRVFRTYHQVVVHSRVHKR 655


>BC146757-1|AAI46758.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPDCLWDCGHVLRTY-TGVVHARFHAR 118
           K  P    DCG V RTY   VVH+R H R
Sbjct: 627 KEKPTECPDCGRVFRTYHQVVVHSRVHKR 655


>BC132722-1|AAI32723.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPDCLWDCGHVLRTY-TGVVHARFHAR 118
           K  P    DCG V RTY   VVH+R H R
Sbjct: 627 KEKPTECPDCGRVFRTYHQVVVHSRVHKR 655


>BC132720-1|AAI32721.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPDCLWDCGHVLRTY-TGVVHARFHAR 118
           K  P    DCG V RTY   VVH+R H R
Sbjct: 627 KEKPTECPDCGRVFRTYHQVVVHSRVHKR 655


>AB046863-1|BAB13469.1|  993|Homo sapiens KIAA1643 protein protein.
          Length = 993

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 10  PG*LRTAKQTSARLLVGLRACPAHL 84
           PG LR+A++ + R   G R CPAHL
Sbjct: 29  PG-LRSARRAACRAYSGPRTCPAHL 52


>AB002388-1|BAA20844.2| 1312|Homo sapiens KIAA0390 protein.
          Length = 1312

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  KRAPDCLWDCGHVLRTY-TGVVHARFHAR 118
           K  P    DCG V RTY   VVH+R H R
Sbjct: 639 KEKPTECPDCGRVFRTYHQVVVHSRVHKR 667


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,277,896
Number of Sequences: 237096
Number of extensions: 1265443
Number of successful extensions: 2281
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2281
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)