Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4417
(527 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 229 1e-60
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 188 2e-48
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 69 2e-12
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 64 9e-11
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 54 5e-08
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 52 4e-07
10_08_0620 - 19321612-19323237 44 6e-05
09_02_0318 - 7191763-7191879,7192375-7192494,7192568-7192666,719... 32 0.33
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 32 0.33
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 28 4.0
05_01_0125 - 853691-853984,854027-854659 28 5.3
12_01_0941 - 9316051-9316056,9316747-9317082 27 7.1
11_04_0305 - 16162063-16162096,16162282-16164365,16165283-161653... 27 7.1
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 229 bits (559), Expect = 1e-60
Identities = 106/173 (61%), Positives = 144/173 (83%)
Frame = +3
Query: 3 KLIEQKLHPQTIIAGWRIAFDAAKQALAEASFDHQKNLNEASLRVDLENIGRTTLSSKIL 182
KL+ K+HP TIIAG+R+A + A+ AL E + D+++N+++ R DL NI TTLSSKIL
Sbjct: 108 KLVNMKIHPMTIIAGYRMAVECARNALLERTMDNKENIDK--FRSDLMNIAMTTLSSKIL 165
Query: 183 SNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKV 362
S KE+F +LAVDAVLRLKGS NL+AIQI+KI GG L++SFLDEGF+L+KK+G+ QPK++
Sbjct: 166 SQDKEYFAELAVDAVLRLKGSTNLEAIQILKIPGGSLKDSFLDEGFILDKKIGLGQPKRI 225
Query: 363 ENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAH 521
ENA IL+ANT MDTDK+K++G+ ++VDSMAK+AE+E AEK+KM++KV KI+ H
Sbjct: 226 ENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAEKQKMREKVQKIIGH 278
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 188 bits (459), Expect = 2e-48
Identities = 88/140 (62%), Positives = 114/140 (81%)
Frame = +3
Query: 102 HQKNLNEASLRVDLENIGRTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKIS 281
H + R DL NI TTLSSKILS KE+F LAVDAVLRLKGS NL+AIQI+K +
Sbjct: 116 HPMTIIADKFRSDLMNIAMTTLSSKILSQDKEYFAGLAVDAVLRLKGSTNLEAIQILKKT 175
Query: 282 GGLLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIA 461
GG L++SFLDEGF+L+KK+G+ QPK++ENA IL+ANT MDTDK+K++G+ ++VDSMAK+A
Sbjct: 176 GGSLKDSFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVA 235
Query: 462 ELEVAEKEKMKDKVNKILAH 521
E+E AEK+KM++KV KI+ H
Sbjct: 236 EIEAAEKQKMREKVQKIIGH 255
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 68.9 bits (161), Expect = 2e-12
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Frame = +3
Query: 9 IEQKLHPQTIIAGWRIAFDAAKQALAE-ASFDHQKNLNEASLRVDLENIGRTTLSSKILS 185
IE +HP ++I +R A A + + + A+ K+L E + L TTLSSK++
Sbjct: 115 IEDGVHPHSLIRSYRTAGHLAIEKVKDLATSIEGKSLEEK--KELLAKCAATTLSSKLIG 172
Query: 186 NHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDEGFLLNKKVGV----HQP 353
KE F + VDAVL + L + I K+ GG + +SFL G K QP
Sbjct: 173 GEKEFFASMVVDAVLAISNDDRLNLLGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQP 232
Query: 354 KKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNK 509
KK + IL+ N ++ K + + I++ + + AE + DK++K
Sbjct: 233 KKFLSPKILLLNIELEL-KSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDK 283
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 63.7 bits (148), Expect = 9e-11
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 5/174 (2%)
Frame = +3
Query: 3 KLIEQKLHPQTIIAGWRIAFDAAKQALAEASFDHQKNLNEASLRVDLENIGRTTLSSKIL 182
KL+E+ +HP I G+ +A A L S H+ + ++ L TTLSSKI+
Sbjct: 118 KLLERGIHPIRIAEGYELASRIAFDHLEHIS--HKFEFSATNIE-PLVQTCMTTLSSKIV 174
Query: 183 SNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQ 350
+ K ++AV AVL + + NL I++ GG LE++ L G +++K + Q
Sbjct: 175 NRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQ 234
Query: 351 -PKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNK 509
PK++E+A I I P + K K + +D++ K L E++ + V K
Sbjct: 235 MPKRIEDAKIAILTCPFEPPKPKT-KHKVDIDTVEKFQMLREQEQKYFDEMVQK 287
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 54.4 bits (125), Expect = 5e-08
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 32/202 (15%)
Frame = +3
Query: 6 LIEQKLHPQTIIAGWRIAFDAAKQALAEASFDH----------QKNLNEA--------SL 131
L+ K+HP +II+G+R+ ++ + A+ H Q + EA ++
Sbjct: 64 LVRNKIHPTSIISGYRLQYNFRFKTNVPAANPHCLTCFTIIYYQLAMREACKYVEEKLAV 123
Query: 132 RVD------LENIGRTTLSSKILSNHKEHFTKLAVDAVLRLKGSG-------NLKAIQII 272
+VD L N +T++SSK++++ + F L VDAV +K + +K+I I+
Sbjct: 124 KVDKLGKDSLINCAKTSMSSKLINSDSDFFANLVVDAVQAVKTTNAKGEVKYPIKSINIL 183
Query: 273 KISGGLLEESFLDEGFLLNK-KVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSM 449
K G ++S+L G+ LN + P +V A I + + K+++ G + V
Sbjct: 184 KAHGKSAKDSYLLNGYALNTGRAAQGMPTRVTPARIACLDFNLQKTKMQL-GVQVLVTDP 242
Query: 450 AKIAELEVAEKEKMKDKVNKIL 515
++ ++ E + K+++ KIL
Sbjct: 243 RELEKIRQRESDITKERIEKIL 264
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 51.6 bits (118), Expect = 4e-07
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Frame = +3
Query: 120 EASLRVDLENIGRTTLSSKILSNHKEHFTKLAVDAVLRLKGSG-----NLKAIQIIKISG 284
E S R L T L+SK++S + + LAVDA L + +L+ I+++K G
Sbjct: 150 ELSDRDSLVKSASTALNSKVVSQYSSLLSPLAVDAALSVVDPAHPDLLDLRDIRVVKKLG 209
Query: 285 GLLEESFLDEGFLLNKKV--GVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKI 458
G ++++ L G + +KK P +VENA I + + K + S I V A++
Sbjct: 210 GTVDDTELIRGLIFDKKASHAAGGPTRVENAKIAVIQFQVSPPKTDIEQSVI-VSDYAQM 268
Query: 459 AELEVAEKEKMKDKVNKILAHKC 527
+ E+ + V KI A C
Sbjct: 269 DRILREERNYILGMVKKIKASGC 291
>10_08_0620 - 19321612-19323237
Length = 541
Score = 44.4 bits (100), Expect = 6e-05
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +3
Query: 120 EASLRVDLENIGRTTLSSKILSNHKEHFTKLAVDAVLRLKGSG-----NLKAIQIIKISG 284
E S R L T L+SK++S + + LAVDA L + +L+ I+++K G
Sbjct: 154 ELSDRDALVKSASTALNSKVVSQYSTLLSPLAVDAALAVVDPAHPYLLDLRDIRVVKKLG 213
Query: 285 GLLEESFLDEGFLLNKKVG--VHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKI 458
++++ L G +LNKK P ++ +A I + + K + S + V A++
Sbjct: 214 CTVDDTELIRGLVLNKKASHVAGGPTRIGDAKIAVIQFQVSPPKTDIEHSVV-VSDYAQM 272
Query: 459 AELEVAEKEKMKDKVNKILAHKC 527
+ E+ + V KI A C
Sbjct: 273 DRILREERNYILGMVKKIKASGC 295
>09_02_0318 -
7191763-7191879,7192375-7192494,7192568-7192666,
7192846-7192957,7193058-7193161,7193341-7193520,
7193611-7193880,7194364-7194660,7195283-7195477
Length = 497
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 348 QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 488
Q + NA+I +A PMD ++ FG +K+D +I +E AEK K
Sbjct: 203 QAHRETNADITVAALPMDEERATAFG-LMKIDDEGRI--IEFAEKPK 246
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 31.9 bits (69), Expect = 0.33
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Frame = +3
Query: 57 AFDAAKQALAEASFDHQKNLNEASLRVDLENIGRTTLSSKILSNHKEHFTKLAVDAVLRL 236
AFDA ++ + +K N L LE+ R I++ E LA V RL
Sbjct: 278 AFDANVDSITQLLLVDKKINNARDLITILEDAIRGGYPILIVTEDIEQ-EALATLVVNRL 336
Query: 237 KGSGNLKAIQIIKISG-GLLEESFLDE------GFLLNKKVGVHQPKKVENANILIANTP 395
+G+ LK I IK G G + +LD+ G ++ ++VG+ K + A
Sbjct: 337 RGA--LK-IAAIKAPGFGERKSQYLDDIATLTGGTVIREEVGLSLDKADRDVLGTAAKVV 393
Query: 396 MDTDKIKVFGSTIKVDSMAKIA-----ELEVAEKEKMKDKVNKILA 518
+ D + G D + K ++EVAE+E K+K+N+ +A
Sbjct: 394 VTKDSTTIVGDGTTQDEVNKRVTQIKNQIEVAEQEYEKEKLNERIA 439
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 339 GVHQPKKVENANILIANTPMDTDKI--KVFGSTIKVDSMAKIAELEVAEKEKMK 494
G PKK+ L+ N P D+D + +VFG + + ++ KI + K K K
Sbjct: 253 GYMDPKKLNIEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKPK 306
>05_01_0125 - 853691-853984,854027-854659
Length = 308
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -2
Query: 385 AIRMLAFSTFFG*CTPTFLFSKNPSSKNDSSRRPPDILIIWIAFKLPDPFKRKTASTANF 206
A+R+ A S + + F ++ ++RR P++L F P+P R+T+ST F
Sbjct: 43 AVRLRAVSRDWNAALTSDYFILAHRARAAAARRHPELLF----FAPPEP--RRTSSTTTF 96
Query: 205 VKCSL 191
CSL
Sbjct: 97 YACSL 101
>12_01_0941 - 9316051-9316056,9316747-9317082
Length = 113
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +3
Query: 54 IAFDAAKQALAEASFDHQKNLNEASLRVDLENIGRTTLSSKILSNHKEHFTKLAVDAVLR 233
+AF A L EAS D L A +VD+ +S+ +H+ H L + V
Sbjct: 51 LAFKAQGARLLEASLDDHDGLVAAVRQVDV------VVSAMSGVHHRSHNILLQLKLVKA 104
Query: 234 LKGSGNLK 257
+K +GN+K
Sbjct: 105 IKEAGNVK 112
>11_04_0305 -
16162063-16162096,16162282-16164365,16165283-16165351,
16168317-16169288,16169548-16169650,16170427-16170509
Length = 1114
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 141 LENIGRTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESF 305
LEN+ ++ ++K KEH L + RL G LK + ++ L+EE F
Sbjct: 773 LENVSASSYAAKASLCTKEHLIFLKLRCTSRLGDDGLLKEEGLSEMEQRLVEEVF 827
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,269,589
Number of Sequences: 37544
Number of extensions: 229998
Number of successful extensions: 676
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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