Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4417
         (527 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   1.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   5.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.8  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   7.8  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 328 FSKNPSSKNDSSRRPPDILIIW 263
           FSKNP + N +   PP  L+++
Sbjct: 513 FSKNPVTVNLTKLHPPADLVVY 534


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 328 TKKLVYINQRK*KMLTSLLQTHQWTL 405
           T+ L+Y  +R+ K L  L+    W L
Sbjct: 141 TQPLIYSRRRRSKRLAGLMIVAVWVL 166


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -1

Query: 386 CNKDVSIFYFLWLMYTN 336
           C  D  +++  WL Y N
Sbjct: 357 CPSDRMVYFITWLGYVN 373


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -1

Query: 386 CNKDVSIFYFLWLMYTN 336
           C  D  +++  WL Y N
Sbjct: 357 CPSDRMVYFITWLGYVN 373


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -1

Query: 386 CNKDVSIFYFLWLMYTN 336
           C  D  +++  WL Y N
Sbjct: 357 CPSDRMVYFITWLGYVN 373


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 295  KSHSWMKGSC*TKKLVYINQRK*KMLTSLLQ 387
            K   W++G   T +L+Y  Q   K L  +LQ
Sbjct: 995  KEPPWLEGVHVTPELIYEYQIHPKTLNEVLQ 1025


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,979
Number of Sequences: 438
Number of extensions: 2496
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)