Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4124
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021393-1|AAX33541.1| 1322|Drosophila melanogaster LD15043p pro...    30   3.9  
AL031227-1|CAA20225.1| 1306|Drosophila melanogaster EG:66A1.2 pr...    30   3.9  
AE014298-649|AAF45963.3| 1305|Drosophila melanogaster CG12179-PA...    30   3.9  
AE014298-648|AAF45962.3| 1019|Drosophila melanogaster CG12179-PB...    30   3.9  
AY051942-1|AAK93366.1|  408|Drosophila melanogaster LD41958p pro...    29   6.9  
AE014134-1880|AAF52946.1|  408|Drosophila melanogaster CG5168-PA...    29   6.9  

>BT021393-1|AAX33541.1| 1322|Drosophila melanogaster LD15043p protein.
          Length = 1322

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -3

Query: 388  LCSWYHARSSKIWRMHTRYSQKTQSKLIILLQSVKFATLNEFI*QNRDILIDKIFRDVNF 209
            +CS+   R     R    + Q  Q +  +LLQ  K   L + + Q +DILI +       
Sbjct: 939  VCSFVQQRQ----RQFREHYQNQQQQQFVLLQQQKLYQLQKQLNQQKDILIQRQQHCGQC 994

Query: 208  HQLPHSRTALTQ 173
             Q  H RT + Q
Sbjct: 995  AQCGHQRTCIHQ 1006


>AL031227-1|CAA20225.1| 1306|Drosophila melanogaster EG:66A1.2
            protein.
          Length = 1306

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -3

Query: 388  LCSWYHARSSKIWRMHTRYSQKTQSKLIILLQSVKFATLNEFI*QNRDILIDKIFRDVNF 209
            +CS+   R     R    + Q  Q +  +LLQ  K   L + + Q +DILI +       
Sbjct: 940  VCSFVQQRQ----RQFREHYQNQQQQQFVLLQQQKLYQLQKQLNQQKDILIQRQQHCGQC 995

Query: 208  HQLPHSRTALTQ 173
             Q  H RT + Q
Sbjct: 996  AQCGHQRTCIHQ 1007


>AE014298-649|AAF45963.3| 1305|Drosophila melanogaster CG12179-PA,
            isoform A protein.
          Length = 1305

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -3

Query: 388  LCSWYHARSSKIWRMHTRYSQKTQSKLIILLQSVKFATLNEFI*QNRDILIDKIFRDVNF 209
            +CS+   R     R    + Q  Q +  +LLQ  K   L + + Q +DILI +       
Sbjct: 939  VCSFVQQRQ----RQFREHYQNQQQQQFVLLQQQKLYQLQKQLNQQKDILIQRQQHCGQC 994

Query: 208  HQLPHSRTALTQ 173
             Q  H RT + Q
Sbjct: 995  AQCGHQRTCIHQ 1006


>AE014298-648|AAF45962.3| 1019|Drosophila melanogaster CG12179-PB,
           isoform B protein.
          Length = 1019

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -3

Query: 388 LCSWYHARSSKIWRMHTRYSQKTQSKLIILLQSVKFATLNEFI*QNRDILIDKIFRDVNF 209
           +CS+   R     R    + Q  Q +  +LLQ  K   L + + Q +DILI +       
Sbjct: 653 VCSFVQQRQ----RQFREHYQNQQQQQFVLLQQQKLYQLQKQLNQQKDILIQRQQHCGQC 708

Query: 208 HQLPHSRTALTQ 173
            Q  H RT + Q
Sbjct: 709 AQCGHQRTCIHQ 720


>AY051942-1|AAK93366.1|  408|Drosophila melanogaster LD41958p
           protein.
          Length = 408

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 331 SIEYASSIFYCYVHGTN-YITQYVVIEDCLRSQYL 432
           +IEY S   + YV   N  +TQY + EDC R  +L
Sbjct: 81  AIEYVSESRHLYVGQENGTVTQYALSEDCNRLSFL 115


>AE014134-1880|AAF52946.1|  408|Drosophila melanogaster CG5168-PA
           protein.
          Length = 408

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 331 SIEYASSIFYCYVHGTN-YITQYVVIEDCLRSQYL 432
           +IEY S   + YV   N  +TQY + EDC R  +L
Sbjct: 81  AIEYVSESRHLYVGQENGTVTQYALSEDCNRLSFL 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,861,845
Number of Sequences: 53049
Number of extensions: 532873
Number of successful extensions: 1034
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)