Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4124
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    24   1.3  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    24   1.3  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    24   1.3  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    24   1.3  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   4.1  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   7.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.5  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 566 RVLKILVSLHKANSYNEAMQNEYTVYTIFKFGLYNCKYI 682
           +++  L + +K ++YN    N Y      K   YN  YI
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 566 RVLKILVSLHKANSYNEAMQNEYTVYTIFKFGLYNCKYI 682
           +++  L + +K ++YN    N Y      K   YN  YI
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 566 RVLKILVSLHKANSYNEAMQNEYTVYTIFKFGLYNCKYI 682
           +++  L + +K ++YN    N Y      K   YN  YI
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 566 RVLKILVSLHKANSYNEAMQNEYTVYTIFKFGLYNCKYI 682
           +++  L + +K ++YN    N Y      K   YN  YI
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 575 KILVSLHKANSYNEAMQNEYTVYTIFKFGLYNCKYILNK*NKNVLKIP 718
           KI+ SL  +N+Y  +  N Y  Y    +  YN K        N+ +IP
Sbjct: 313 KIISSL--SNNYKYSNYNNYNNYNNNNYNNYNKKLYYKNYIINIEQIP 358


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -1

Query: 711 FNTFLFYL-FNIYLQLYRPNLKIVYTVYSFCMASLYELALCKL 586
           F   L YL F+  +  Y P   +V+T Y    A++ +    KL
Sbjct: 200 FTEHLGYLIFSSTISFYLPLFVMVFTYYKIYRAAVIQTKSLKL 242


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 410 TVCVLNIFDFVDGLGCLKDDLK 475
           T CV+  FD++     +  DLK
Sbjct: 472 TACVVEAFDYLHSRNIIYRDLK 493


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 566 RVLKILVSLHKANSYN 613
           R+L +LVSLH+ + Y+
Sbjct: 22  RMLALLVSLHRLSIYS 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,019
Number of Sequences: 438
Number of extensions: 4180
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)