Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4123
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.1  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   5.4  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   5.4  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   5.4  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   7.1  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   7.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.4  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 302 VLIYRLFTSLSFTFKKKNKFGNRFLYSTVNNK 397
           ++IY + T +S  F   +   N  LY+ ++NK
Sbjct: 323 IIIYTILTYMSGVFYYLSTTVNPLLYNIMSNK 354


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 210 VHNANIFFKSINSNIQEQNYKK 145
           +HN N  +   N+N    NY K
Sbjct: 89  IHNNNYKYNYNNNNYNNNNYNK 110


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 210 VHNANIFFKSINSNIQEQNYKK 145
           +HN N  +   N+N    NY K
Sbjct: 89  IHNNNYKYNYNNNNYNNNNYNK 110


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +2

Query: 314 RLFTSLSFTFKKKNKFGNRFLYSTVNNKNEN*IPTYNLYQTNIS 445
           ++ +SLS  +K  N       Y+  NN N N    Y     NI+
Sbjct: 313 KIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNIN 356



 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 243 ISDTYKYYKQEVHNANIFFKSINSNIQEQNYKK 145
           +S+ YKY     +N N    +  +N    NYKK
Sbjct: 318 LSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKK 350


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 353 NKFGNRFLYSTVNNKNEN*IPTYN 424
           +   N + YS  NN N N    YN
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNNNYN 106


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 353 NKFGNRFLYSTVNNKNEN*IPTYN 424
           +   N + YS  NN N N    YN
Sbjct: 83  SSLSNNYKYSNYNNYNNNYNNNYN 106


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 545 YPLSTCIFYIDT 510
           YPL+ C++Y  T
Sbjct: 298 YPLTGCLYYFST 309


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 575 CRESTTHILAYPLSTCIFYIDTKFQVN 495
           CRE T       + +C F ID     N
Sbjct: 174 CRELTARFTTDVIGSCAFGIDMSSMTN 200


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 630 HYYFSPPQQFSSLKPSQL 577
           H++ SP Q  SS  P Q+
Sbjct: 630 HFHQSPSQNHSSAVPDQM 647


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,821
Number of Sequences: 438
Number of extensions: 3724
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)