Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4122
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 85 2e-17
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 85 2e-17
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 80 7e-16
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 75 3e-14
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 70 1e-12
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 69 2e-12
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 69 2e-12
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 69 2e-12
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 67 7e-12
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 67 7e-12
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 67 7e-12
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 67 7e-12
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 66 1e-11
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 66 2e-11
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 65 3e-11
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 65 3e-11
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 65 3e-11
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 65 3e-11
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 65 3e-11
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 63 9e-11
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 63 9e-11
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 63 9e-11
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 63 9e-11
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 62 2e-10
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 62 3e-10
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 62 3e-10
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 62 3e-10
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 62 3e-10
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 61 3e-10
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 61 3e-10
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 61 5e-10
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 49 2e-06
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 30 0.98
Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 27 5.2
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 27 5.2
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 27 5.2
Z70307-14|CAA94338.2| 409|Caenorhabditis elegans Hypothetical p... 27 6.9
U40412-4|AAV28342.1| 618|Caenorhabditis elegans Hypothetical pr... 27 6.9
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical... 27 9.1
AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical ... 27 9.1
AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical ... 27 9.1
AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical ... 27 9.1
AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induc... 27 9.1
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 85.0 bits (201), Expect = 2e-17
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Frame = +2
Query: 176 RDYYRPW--KQMAIANRDVGSTI--TSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK 343
R RP+ Q + VG I +N ++ V++DV F PEE+ V D +I+EGK
Sbjct: 26 RHMIRPYWADQTMLTGHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGK 85
Query: 344 HEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTV 469
H E+ D++G + R F R+Y LP P+ ++S LS++GVLTV
Sbjct: 86 HNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNNGVLTV 127
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 85.0 bits (201), Expect = 2e-17
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Frame = +2
Query: 176 RDYYRPW--KQMAIANRDVGSTI--TSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK 343
R RP+ Q + VG I +N ++ V++DV F PEE+ V D +I+EGK
Sbjct: 25 RHMIRPYWADQTMLTGHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGK 84
Query: 344 HEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTV 469
H E+ D++G + R F R+Y LP P+ ++S LS++GVLTV
Sbjct: 85 HNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNNGVLTV 126
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 80.2 bits (189), Expect = 7e-16
Identities = 34/80 (42%), Positives = 55/80 (68%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 415
+ + K+KF+V LDVQ F+P+EI VK + +++ +HE R D HG ++R+ R Y LP++
Sbjct: 27 VHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDD 86
Query: 416 CNPDTVESRLSSDGVLTVIA 475
+ TV+S L++ GVLT+ A
Sbjct: 87 VDVSTVKSHLATRGVLTITA 106
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 74.9 bits (176), Expect = 3e-14
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 415
+T+ +KF+V LD F P +I VK +I+ +H+ R E+G ++R+ R Y LPE+
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPED 86
Query: 416 CNPDTVESRLSSDGVLTVIA 475
+P TV S L+S GVLT+ A
Sbjct: 87 VDPSTVRSHLNSSGVLTITA 106
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/85 (35%), Positives = 53/85 (62%)
Frame = +2
Query: 221 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 400
DV S + ++ +F V++D F PEEI VKT D +++EG+HE+ +D+ + F R+Y
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKY 161
Query: 401 ALPENCNPDTVESRLSSDGVLTVIA 475
LP + + ++++S + + G L V A
Sbjct: 162 QLPRDVDFNSIQSSIDAKGRLQVEA 186
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 68.9 bits (161), Expect = 2e-12
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHE---ERQDEHGYISRQFTRRYAL 406
+T+ +KF+V LD F P +I VK +I+ +H+ R E+G ++R+ R Y L
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKL 86
Query: 407 PENCNPDTVESRLSSDGVLTVIA 475
PE+ +P TV S L+S GVLT+ A
Sbjct: 87 PEDVDPSTVRSHLNSSGVLTITA 109
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 68.9 bits (161), Expect = 2e-12
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHE---ERQDEHGYISRQFTRRYAL 406
+T+ +KF+V LD F P +I VK +I+ +H+ R E+G ++R+ R Y L
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKL 86
Query: 407 PENCNPDTVESRLSSDGVLTVIA 475
PE+ +P TV S L+S GVLT+ A
Sbjct: 87 PEDVDPSTVRSHLNSSGVLTITA 109
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 68.5 bits (160), Expect = 2e-12
Identities = 31/85 (36%), Positives = 53/85 (62%)
Frame = +2
Query: 221 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 400
++G I +++ KF V LDV HF PE + +K + +EG +E + EHGY+ R F++
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEG-IQETKSEHGYLKRSFSKMI 101
Query: 401 ALPENCNPDTVESRLSSDGVLTVIA 475
LPE+ + +V+S +S++G L + A
Sbjct: 102 LLPEDADLPSVKSAISNEGKLQIEA 126
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 66.9 bits (156), Expect = 7e-12
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +2
Query: 242 SNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCN 421
S+ ++ DV ++ PEE++VKT D ++V KHEE+ + + R++ + + LP N
Sbjct: 23 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQR-TVFREYNQEFLLPRGTN 81
Query: 422 PDTVESRLSSDGVLTVIA 475
P+ + S LS+DGVLTV A
Sbjct: 82 PEQISSTLSTDGVLTVEA 99
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 66.9 bits (156), Expect = 7e-12
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +2
Query: 242 SNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCN 421
S+ ++ DV ++ PEE++VKT D ++V KHEE+ + + R++ + + LP N
Sbjct: 120 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQR-TVFREYNQEFLLPRGTN 178
Query: 422 PDTVESRLSSDGVLTVIA 475
P+ + S LS+DGVLTV A
Sbjct: 179 PEQISSTLSTDGVLTVEA 196
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 66.9 bits (156), Expect = 7e-12
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +2
Query: 242 SNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCN 421
S+ ++ DV ++ PEE++VKT D ++V KHEE+ + + R++ + + LP N
Sbjct: 134 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQR-TVFREYNQEFLLPRGTN 192
Query: 422 PDTVESRLSSDGVLTVIA 475
P+ + S LS+DGVLTV A
Sbjct: 193 PEQISSTLSTDGVLTVEA 210
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 66.9 bits (156), Expect = 7e-12
Identities = 30/85 (35%), Positives = 54/85 (63%)
Frame = +2
Query: 221 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 400
++G I +++ KF V LDV HF PE++ ++ + +EG +E++ EHGY R F++
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG-IQEKKSEHGYSKRSFSKMI 101
Query: 401 ALPENCNPDTVESRLSSDGVLTVIA 475
LPE+ + +V+S +S++G L + A
Sbjct: 102 LLPEDVDLTSVKSAISNEGKLQIEA 126
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 66.1 bits (154), Expect = 1e-11
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +2
Query: 230 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 409
++I F LDV + + + V D +IVEG H E++D +G I F RR+ LP
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLP 131
Query: 410 ENCNPDTVESRLSSDGVLTVIA 475
+ P++V+S+L++DG LT+ A
Sbjct: 132 KAVAPESVQSQLTADGHLTIDA 153
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 65.7 bits (153), Expect = 2e-11
Identities = 34/106 (32%), Positives = 59/106 (55%)
Frame = +2
Query: 158 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 337
+T ++ Y+R + D I +++ KF V LDV HF PE + +K + +E
Sbjct: 21 LTGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIE 80
Query: 338 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIA 475
G +E + EHGY+ R F++ LPE+ + +V+S +S++G L + A
Sbjct: 81 GI-QETKSEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKLQIEA 125
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 64.9 bits (151), Expect = 3e-11
Identities = 30/80 (37%), Positives = 50/80 (62%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 415
I +++ KF V LDV HF PE + +K + +EG +E + EHGY+ R F++ LPE+
Sbjct: 1 IVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGI-QETKSEHGYLKRSFSKMILLPED 59
Query: 416 CNPDTVESRLSSDGVLTVIA 475
+ +V+S +S++G L + A
Sbjct: 60 ADLPSVKSAISNEGKLQIEA 79
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 64.9 bits (151), Expect = 3e-11
Identities = 34/106 (32%), Positives = 60/106 (56%)
Frame = +2
Query: 158 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 337
IT ++ Y+R + D I +++ KF V LDV HF PE++ ++ + +E
Sbjct: 13 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 72
Query: 338 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIA 475
G +E++ EHGY R F++ LPE+ + +V+S +S++G L + A
Sbjct: 73 GI-QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEA 117
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 64.9 bits (151), Expect = 3e-11
Identities = 34/106 (32%), Positives = 60/106 (56%)
Frame = +2
Query: 158 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 337
IT ++ Y+R + D I +++ KF V LDV HF PE++ ++ + +E
Sbjct: 21 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 80
Query: 338 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIA 475
G +E++ EHGY R F++ LPE+ + +V+S +S++G L + A
Sbjct: 81 GI-QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEA 125
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 64.9 bits (151), Expect = 3e-11
Identities = 34/106 (32%), Positives = 60/106 (56%)
Frame = +2
Query: 158 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 337
IT ++ Y+R + D I +++ KF V LDV HF PE++ ++ + +E
Sbjct: 21 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 80
Query: 338 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIA 475
G +E++ EHGY R F++ LPE+ + +V+S +S++G L + A
Sbjct: 81 GI-QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEA 125
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 64.9 bits (151), Expect = 3e-11
Identities = 34/106 (32%), Positives = 60/106 (56%)
Frame = +2
Query: 158 ITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 337
IT ++ Y+R + D I +++ KF V LDV HF PE++ ++ + +E
Sbjct: 21 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 80
Query: 338 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIA 475
G +E++ EHGY R F++ LPE+ + +V+S +S++G L + A
Sbjct: 81 GI-QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEA 125
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 63.3 bits (147), Expect = 9e-11
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +2
Query: 230 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 409
S I ++ DKF VNL+V +F PEE+ V + ++G+H+ ++EHG + F+R LP
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEHDV-ENEHGASRKSFSRMILLP 101
Query: 410 ENCNPDTVESRLSSDGVLTVIA 475
E+ + +V + LS+DG L + A
Sbjct: 102 EDVDITSVATNLSNDGKLCIEA 123
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 63.3 bits (147), Expect = 9e-11
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = +2
Query: 230 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 409
S I +N KF +NL+V F PE++ + DG+ + +E + EHGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 410 ENCNPDTVESRLSSDGVLTVIA 475
E+ + V S LS DG L++ A
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEA 121
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 63.3 bits (147), Expect = 9e-11
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = +2
Query: 230 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 409
S I +N KF +NL+V F PE++ + DG+ + +E + EHGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 410 ENCNPDTVESRLSSDGVLTVIA 475
E+ + V S LS DG L++ A
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEA 121
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 63.3 bits (147), Expect = 9e-11
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = +2
Query: 230 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 409
S I +N KF +NL+V F PE++ + DG+ + +E + EHGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 410 ENCNPDTVESRLSSDGVLTVIA 475
E+ + V S LS DG L++ A
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEA 121
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 62.1 bits (144), Expect = 2e-10
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 415
I +N KF +NL+V F PE++ + DG+ + +E + EHGY + F+R LPE+
Sbjct: 44 IVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLPED 102
Query: 416 CNPDTVESRLSSDGVLTVIA 475
+ V S LS DG L++ A
Sbjct: 103 VDVGAVASNLSEDGKLSIEA 122
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 415
IT+ F + +DV HF PEEI V D + + G+ E + + R F+R+Y++P++
Sbjct: 97 ITNTSHGFTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDD 156
Query: 416 CNPDTVESRLSSDGVLTV 469
+ DT+ S L++ GVL +
Sbjct: 157 VHLDTIRSHLTNSGVLII 174
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 415
IT+ F + +DV HF PEEI V D + + G+ E + + R F+R+Y++P++
Sbjct: 97 ITNTSHGFTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDD 156
Query: 416 CNPDTVESRLSSDGVLTV 469
+ DT+ S L++ GVL +
Sbjct: 157 VHLDTIRSHLTNSGVLII 174
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +2
Query: 230 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 409
S I +N KF +NL+V F PE++ + + ++G+ E + D HGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSFSRVILLP 99
Query: 410 ENCNPDTVESRLSSDGVLTVIA 475
E+ + V S LS DG L++ A
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEA 121
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +2
Query: 230 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 409
S I +N KF +NL+V F PE++ + + ++G+ E + D HGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSFSRVILLP 99
Query: 410 ENCNPDTVESRLSSDGVLTVIA 475
E+ + V S LS DG L++ A
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEA 121
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 61.3 bits (142), Expect = 3e-10
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 415
+ + D F+V L+ +F P+EI VK + + +H ++D G +SR TR Y LP+N
Sbjct: 27 VLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKN 86
Query: 416 CNPDTVESRLSSDGVLTVIA 475
+ T++S L S G+L + A
Sbjct: 87 VDMKTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 61.3 bits (142), Expect = 3e-10
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 415
+ + D F+V L+ +F P+EI VK + + +H ++D G +SR TR Y LP+N
Sbjct: 27 VLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKN 86
Query: 416 CNPDTVESRLSSDGVLTVIA 475
+ T++S L S G+L + A
Sbjct: 87 VDMKTIKSNLDSHGILHIEA 106
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 60.9 bits (141), Expect = 5e-10
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +2
Query: 248 KDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPD 427
+D F+V L+ +F P EI VK ++ + H + D+ G I+R TR Y LP+ +P
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPA 89
Query: 428 TVESRLSSDGVLTV 469
T++S+L G+L +
Sbjct: 90 TIKSKLDGSGILHI 103
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 58.0 bits (134), Expect = 3e-09
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 415
+ + KF V LDV F PEE+ V + +EG HE + EHG+ R FTR++ LP++
Sbjct: 46 VENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKT-EHGFSKRSFTRQFTLPKD 104
Query: 416 CNPDTVESRLSSDGVLTVIA 475
+ + + ++ +G +T+ A
Sbjct: 105 VDLAHIHTVINKEGQMTIDA 124
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/83 (26%), Positives = 45/83 (54%)
Frame = +2
Query: 221 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 400
D + I +KF VNL+V PEE+ + + ++ +H+E ++++ ++ +++
Sbjct: 39 DCRNEIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSI 98
Query: 401 ALPENCNPDTVESRLSSDGVLTV 469
LPE+ + + S LS DG L +
Sbjct: 99 VLPEDVDVTHLSSNLSEDGKLLI 121
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.9 bits (64), Expect = 0.98
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 236 ITSNKDKFQVNLDVQHFSPEE 298
I +++ KF V LDV HF PE+
Sbjct: 2 IVNDESKFSVQLDVSHFKPED 22
>Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical
protein F32H5.4 protein.
Length = 528
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 233 TITSNKDKFQVNLDVQHFSPEEISVKTA 316
TITS D + +N+D HF E VKT+
Sbjct: 95 TITSKYDFYSINVDYGHFCGEGAWVKTS 122
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 24 SLDISHAKVK*KCLCCHSSWDTNRTAFAIRTSDWRLLRTIS*RPS 158
++DI+H K + + W + AF ++ + W +LRTI+ RP+
Sbjct: 2575 TVDIAHRM---KYIMQNQDWSKFKHAFWLKFALWGMLRTIAKRPT 2616
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 24 SLDISHAKVK*KCLCCHSSWDTNRTAFAIRTSDWRLLRTIS*RPS 158
++DI+H K + + W + AF ++ + W +LRTI+ RP+
Sbjct: 2586 TVDIAHRM---KYIMQNQDWSKFKHAFWLKFALWGMLRTIAKRPT 2627
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 24 SLDISHAKVK*KCLCCHSSWDTNRTAFAIRTSDWRLLRTIS*RPS 158
++DI+H K + + W + AF ++ + W +LRTI+ RP+
Sbjct: 2586 TVDIAHRM---KYIMQNQDWSKFKHAFWLKFALWGMLRTIAKRPT 2627
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 24 SLDISHAKVK*KCLCCHSSWDTNRTAFAIRTSDWRLLRTIS*RPS 158
++DI+H K + + W + AF ++ + W +LRTI+ RP+
Sbjct: 2586 TVDIAHRM---KYIMQNQDWSKFKHAFWLKFALWGMLRTIAKRPT 2627
>Z70307-14|CAA94338.2| 409|Caenorhabditis elegans Hypothetical
protein C39E9.12 protein.
Length = 409
Score = 27.1 bits (57), Expect = 6.9
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 79 PGIPTEPPSRSGLRTGA-YSGRSPDGRHHANDVQRLLPSVEADGDRQ*RRRFHHHLE*G* 255
PG+P E + +R A SGR HA ++++ E G+RQ R + H G
Sbjct: 157 PGMPIENRGITPVRQRAPSSGRDRFAMIHAREMEK----EETLGERQERLKKRHEFMTGD 212
Query: 256 IPGQLRR 276
+P +RR
Sbjct: 213 VPEAIRR 219
>U40412-4|AAV28342.1| 618|Caenorhabditis elegans Hypothetical
protein F46G11.1 protein.
Length = 618
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 197 KQMAIANR-DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEER 355
+Q+A N+ + + K +DVQHF + AD + ++ K ++R
Sbjct: 498 RQLATQNQIHITMVVHPRKTDGDTEIDVQHFGGSARVTQEADNVIAIQRKRDDR 551
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical protein
T26A5.5a protein.
Length = 1076
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 64 SAAIHPGIPTEPP-SRSGLRTGAYSGRSPDGRHHANDVQRLLPSVEA 201
S+ +P T PP + S L+ +GR +HH + + +PS EA
Sbjct: 1013 SSPTYPTAITPPPVTLSDLKKDMSNGRKSHSQHHDDGHKHKIPSKEA 1059
>Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 26.6 bits (56), Expect = 9.1
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 80 LGYQPNRLRDQDFGLALTPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKF 259
+G QP + DF + P+D VI P + + P KQ D+G+ S D
Sbjct: 372 IGRQPEIVECVDFTPLIEPEDPFDTVIEPVVGGE--EPVKQ-----ADMGARKNSYDDVL 424
Query: 260 QVNLDVQHFSPEEISVKTADGYVIVE 337
Q Q SP ++AD + E
Sbjct: 425 QWLFRDQPSSPPPARYRSADRFRTTE 450
>Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 26.6 bits (56), Expect = 9.1
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 80 LGYQPNRLRDQDFGLALTPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKF 259
+G QP + DF + P+D VI P + + P KQ D+G+ S D
Sbjct: 476 IGRQPEIVECVDFTPLIEPEDPFDTVIEPVVGGE--EPVKQ-----ADMGARKNSYDDVL 528
Query: 260 QVNLDVQHFSPEEISVKTADGYVIVE 337
Q Q SP ++AD + E
Sbjct: 529 QWLFRDQPSSPPPARYRSADRFRTTE 554
>Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 26.6 bits (56), Expect = 9.1
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 80 LGYQPNRLRDQDFGLALTPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKF 259
+G QP + DF + P+D VI P + + P KQ D+G+ S D
Sbjct: 476 IGRQPEIVECVDFTPLIEPEDPFDTVIEPVVGGE--EPVKQ-----ADMGARKNSYDDVL 528
Query: 260 QVNLDVQHFSPEEISVKTADGYVIVE 337
Q Q SP ++AD + E
Sbjct: 529 QWLFRDQPSSPPPARYRSADRFRTTE 554
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 160 DDGRQEIVRSKRQSEVLIAKAVRLVSQDEWQQRHFYFTLACEISS 26
DDG I R K+ +VL + V LV++ +W RH C+I+S
Sbjct: 67 DDG---IERQKKFLKVL-RELVNLVAEKQWYARHGGAIAICQIAS 107
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 160 DDGRQEIVRSKRQSEVLIAKAVRLVSQDEWQQRHFYFTLACEISS 26
DDG I R K+ +VL + V LV++ +W RH C+I+S
Sbjct: 67 DDG---IERQKKFLKVL-RELVNLVAEKQWYARHGGAIAICQIAS 107
>AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 26.6 bits (56), Expect = 9.1
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 80 LGYQPNRLRDQDFGLALTPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKF 259
+G QP + DF + P+D VI P + + P KQ D+G+ S D
Sbjct: 372 IGRQPEIVECVDFTPLIEPEDPFDTVIEPVVGGE--EPVKQ-----ADMGARKNSYDDVL 424
Query: 260 QVNLDVQHFSPEEISVKTADGYVIVE 337
Q Q SP ++AD + E
Sbjct: 425 QWLFRDQPSSPPPARYRSADRFRTTE 450
>AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 26.6 bits (56), Expect = 9.1
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 80 LGYQPNRLRDQDFGLALTPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKF 259
+G QP + DF + P+D VI P + + P KQ D+G+ S D
Sbjct: 476 IGRQPEIVECVDFTPLIEPEDPFDTVIEPVVGGE--EPVKQ-----ADMGARKNSYDDVL 528
Query: 260 QVNLDVQHFSPEEISVKTADGYVIVE 337
Q Q SP ++AD + E
Sbjct: 529 QWLFRDQPSSPPPARYRSADRFRTTE 554
>AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 26.6 bits (56), Expect = 9.1
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 80 LGYQPNRLRDQDFGLALTPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKF 259
+G QP + DF + P+D VI P + + P KQ D+G+ S D
Sbjct: 476 IGRQPEIVECVDFTPLIEPEDPFDTVIEPVVGGE--EPVKQ-----ADMGARKNSYDDVL 528
Query: 260 QVNLDVQHFSPEEISVKTADGYVIVE 337
Q Q SP ++AD + E
Sbjct: 529 QWLFRDQPSSPPPARYRSADRFRTTE 554
>AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical
protein F38A6.3c protein.
Length = 503
Score = 26.6 bits (56), Expect = 9.1
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 80 LGYQPNRLRDQDFGLALTPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKF 259
+G QP + DF + P+D VI P + + P KQ D+G+ S D
Sbjct: 156 IGRQPEIVECVDFTPLIEPEDPFDTVIEPVVGGE--EPVKQ-----ADMGARKNSYDDVL 208
Query: 260 QVNLDVQHFSPEEISVKTADGYVIVE 337
Q Q SP ++AD + E
Sbjct: 209 QWLFRDQPSSPPPARYRSADRFRTTE 234
>AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induced
factor 1 protein.
Length = 719
Score = 26.6 bits (56), Expect = 9.1
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +2
Query: 80 LGYQPNRLRDQDFGLALTPDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKF 259
+G QP + DF + P+D VI P + + P KQ D+G+ S D
Sbjct: 372 IGRQPEIVECVDFTPLIEPEDPFDTVIEPVVGGE--EPVKQ-----ADMGARKNSYDDVL 424
Query: 260 QVNLDVQHFSPEEISVKTADGYVIVE 337
Q Q SP ++AD + E
Sbjct: 425 QWLFRDQPSSPPPARYRSADRFRTTE 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,950,003
Number of Sequences: 27780
Number of extensions: 188027
Number of successful extensions: 688
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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