BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4119
(588 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025066-1|ABE73237.1| 195|Drosophila melanogaster IP15614p pro... 30 2.7
BT024992-1|ABE01222.1| 557|Drosophila melanogaster IP10669p pro... 30 2.7
AY079183-1|AAL91088.1| 471|Drosophila melanogaster VEGF27Ca pro... 30 2.7
AE014134-1241|AAF52485.2| 482|Drosophila melanogaster CG31629-P... 30 2.7
AY240021-1|AAP57522.1| 595|Drosophila melanogaster SLC26 membra... 28 8.2
AY051897-1|AAK93321.1| 595|Drosophila melanogaster LD38576p pro... 28 8.2
AE013599-2553|AAF57797.1| 595|Drosophila melanogaster CG5002-PA... 28 8.2
>BT025066-1|ABE73237.1| 195|Drosophila melanogaster IP15614p
protein.
Length = 195
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 150 SCPSATEEVLTAQGQLLCECNIHTYVC 230
+CP + E++L GQ C+C+ Y C
Sbjct: 116 TCPKSFEKILQDDGQCRCDCSSGNYDC 142
>BT024992-1|ABE01222.1| 557|Drosophila melanogaster IP10669p
protein.
Length = 557
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 150 SCPSATEEVLTAQGQLLCECNIHTYVC 230
+CP + E++L GQ C+C+ Y C
Sbjct: 478 TCPKSFEKILQDDGQCRCDCSSGNYDC 504
>AY079183-1|AAL91088.1| 471|Drosophila melanogaster VEGF27Ca
protein.
Length = 471
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 150 SCPSATEEVLTAQGQLLCECNIHTYVC 230
+CP + E++L GQ C+C+ Y C
Sbjct: 403 TCPKSFEKILQDDGQCRCDCSSGNYDC 429
>AE014134-1241|AAF52485.2| 482|Drosophila melanogaster CG31629-PA,
isoform A protein.
Length = 482
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 150 SCPSATEEVLTAQGQLLCECNIHTYVC 230
+CP + E++L GQ C+C+ Y C
Sbjct: 403 TCPKSFEKILQDDGQCRCDCSSGNYDC 429
>AY240021-1|AAP57522.1| 595|Drosophila melanogaster SLC26 membrane
transporter protein protein.
Length = 595
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2
Query: 104 ARPPVLVKLERPPGHQCSLVHEKKK 30
ARP V +KLE+ GH+ S+V K+K
Sbjct: 460 ARPHVDIKLEKINGHEVSVVDVKQK 484
>AY051897-1|AAK93321.1| 595|Drosophila melanogaster LD38576p
protein.
Length = 595
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2
Query: 104 ARPPVLVKLERPPGHQCSLVHEKKK 30
ARP V +KLE+ GH+ S+V K+K
Sbjct: 460 ARPHVDIKLEKINGHEVSVVDVKQK 484
>AE013599-2553|AAF57797.1| 595|Drosophila melanogaster CG5002-PA
protein.
Length = 595
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2
Query: 104 ARPPVLVKLERPPGHQCSLVHEKKK 30
ARP V +KLE+ GH+ S+V K+K
Sbjct: 460 ARPHVDIKLEKINGHEVSVVDVKQK 484
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,732,292
Number of Sequences: 53049
Number of extensions: 557539
Number of successful extensions: 942
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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