Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4118
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0217 + 13532018-13532405,13532706-13533175 36 0.033
01_06_1097 + 34507376-34507395,34509380-34511214,34511263-345115... 32 0.54
01_07_0106 - 41107673-41107942,41108362-41108574,41108877-411090... 31 0.71
09_02_0203 - 5746068-5746307,5746469-5746729,5746833-5748239,574... 30 1.6
06_03_0498 - 21432958-21434245,21434579-21435310,21435502-214357... 30 2.2
03_01_0465 + 3598815-3598972,3599949-3600711,3601073-3601159,360... 30 2.2
10_02_0076 - 4976601-4976837,4976856-4976900,4976945-4977070,497... 29 2.9
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 29 2.9
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131... 29 2.9
04_04_1437 + 33600282-33601562 29 3.8
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 29 5.0
01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718 29 5.0
12_02_0719 + 22500217-22500395,22500506-22500551,22500671-225007... 28 6.6
03_06_0195 + 32256771-32258792 28 6.6
03_06_0146 - 31976538-31978643,31978653-31978751 28 6.6
02_03_0406 + 18663986-18664059,18665082-18665405,18665499-186655... 28 6.6
02_02_0706 + 13126176-13126644,13128666-13128867,13129424-131295... 28 6.6
12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775 28 8.8
11_01_0389 - 2937242-2939476,2939556-2939666,2941254-2941450,294... 28 8.8
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 28 8.8
02_04_0469 - 23178589-23178755,23179529-23179697,23179836-231799... 28 8.8
>09_03_0217 + 13532018-13532405,13532706-13533175
Length = 285
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 215 PILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPV-EDTP 391
P+L +P+ D++NE +G+ DD+ +E+ T ED ++ + + + ED
Sbjct: 20 PMLWFHYNYYMPLEESDDEDNEKSGDDDDVSDED-EFSETSDEDESTEETDDDGISEDNK 78
Query: 392 VSISSLSPVSTVTQATDV 445
+ +S +T +A +V
Sbjct: 79 IDVSGDDDDNTTDEAKEV 96
>01_06_1097 + 34507376-34507395,34509380-34511214,34511263-34511598,
34511800-34513691
Length = 1360
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 281 IAGETDDID----NENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTV 427
IA ET+ +D E A L D AD+ PEP+ED + S LS + V
Sbjct: 914 IASETNKVDMIDLKEETAAGYPLDSDDDADKIYPEPMEDNVIDESFLSELDAV 966
>01_07_0106 -
41107673-41107942,41108362-41108574,41108877-41109041,
41109431-41109649,41110205-41110324,41110427-41110489,
41111034-41111606,41111691-41111858,41112414-41112495,
41112667-41112743,41113031-41113101,41114315-41114363
Length = 689
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = +2
Query: 209 PTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDT 388
P P+ +PI +P+H+ ET + + + V+++P + P P+++T
Sbjct: 226 PYPVKEAPILREVPVHISP------VRETSFL--REVPAPVSPVKETPILREVPTPLKET 277
Query: 389 PVSISSLSPVSTVTQATDVE 448
PV ++ P T T + VE
Sbjct: 278 PVILTESPPPPTDTSSITVE 297
>09_02_0203 -
5746068-5746307,5746469-5746729,5746833-5748239,
5748588-5748714,5748800-5749119,5749202-5749963,
5750749-5750898,5751007-5751096,5751196-5751340,
5751440-5751617,5751753-5752448,5752555-5752753
Length = 1524
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +2
Query: 128 EFDKDKEKDYNEIKFKIPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDID 307
EF+K E N +P +FD P + P P V +DD+ +I DD +
Sbjct: 247 EFEKGNESSDNLYPLVMP------SFDTDPHIWLP-----PDPVNKDDDTDIVANNDD-N 294
Query: 308 NENIAVDSTLVEDSPADQN 364
++N A + + D AD+N
Sbjct: 295 SDNNAAEGLSLSDGEADKN 313
>06_03_0498 -
21432958-21434245,21434579-21435310,21435502-21435788,
21435955-21436026,21436130-21436264,21436887-21436925
Length = 850
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 679 WIKTNRWRITS*YTASNHCIIINTQSYVENKIFRYK*NITTSLHFESF 536
W+ RW + Y SN C +I T + E RYK +I +S +F
Sbjct: 476 WVTRKRWALV--YFKSNWCPLIQTTARSEGTNSRYKADICSSHSVSAF 521
>03_01_0465 +
3598815-3598972,3599949-3600711,3601073-3601159,
3601263-3601346,3601428-3601514,3601608-3601694,
3602239-3602292,3602380-3602471,3602564-3602678,
3602763-3602913,3603010-3603155
Length = 607
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +2
Query: 302 IDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTVTQATDVEPEQEVVGQVIR 481
I N +++ ++ + S + N P PV T +S V ++ P + +G +R
Sbjct: 137 IINASLSGSTSNIGQSSSVNNGPTPVYPTGTEKNSGETWFEVGRSRTYTPTADDIGHALR 196
Query: 482 FPCSCISGQCGCCTGA 529
F C + + GA
Sbjct: 197 FECVAVDSETRSSVGA 212
>10_02_0076 -
4976601-4976837,4976856-4976900,4976945-4977070,
4977179-4977397,4977416-4977529,4977562-4977858,
4980144-4980425
Length = 439
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +2
Query: 170 FKIPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDS 349
FK+ K +A D T + +T +L + Q D N I+ T+ + +E ++ STL+ S
Sbjct: 370 FKMAKAEDGKAVDETEF-KKLLTEILGAVMLQLDGNPISVSTNSVLHEPMSTSSTLLSPS 428
Query: 350 PADQNNPEPVE 382
P P E
Sbjct: 429 PPSPMVSSPSE 439
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 233 ITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLS 412
I +VLPI ++ NE+A + + ++E V T + P + P D V SSLS
Sbjct: 197 IPMVLPITDPPEEINEVAIDVEREEDEGGTVGETFTDYRPPKLSLGLPHPDPIVETSSLS 256
Query: 413 PV 418
V
Sbjct: 257 AV 258
>03_06_0014 -
31012116-31012229,31012773-31012985,31013058-31013171,
31013909-31014040,31014624-31014692,31014763-31015017,
31015347-31015520,31016104-31016280,31016999-31017107,
31017343-31017506,31018221-31018517
Length = 605
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 257 VQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPE 373
V+ DN+ G DD+D E + + + S +D+NN E
Sbjct: 531 VEDIDNSPTNGREDDMDEEEEDPEEVIGDTSMSDENNEE 569
>04_04_1437 + 33600282-33601562
Length = 426
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 245 LPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPV-EDTPVSISSL 409
LP HVQ + +G T+DI N ++ +L + A Q NP+ + ED PV + +
Sbjct: 365 LPNHVQMQSGSGPSGATNDIRNHHLI---SLDDFKVAMQLNPQQLGEDWPVLLEKI 417
>07_01_0454 +
3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 260 QQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVS-----ISSLSPVST 424
QQ + E+ ++ N +++ +V PA + +ED P+S I +LS VST
Sbjct: 84 QQQEEEEVLVPRQELPNGTQPMEAVVVPSEPAATVENQQIEDPPISRFTWTIENLSRVST 143
>01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718
Length = 336
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 290 ETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTVTQATD--VEPEQEV 463
E+ + +N + +S+ D PA++ P+ E + ++ P T++TD +P QE+
Sbjct: 92 ESQSQETKNQSDESSKPSDQPAEKPGPDKAEGSAAEPNNPQPSPEPTKSTDETPKPNQEI 151
>12_02_0719 +
22500217-22500395,22500506-22500551,22500671-22500745,
22500846-22500932,22501077-22501148,22501267-22501338,
22501448-22501519,22501644-22502510
Length = 489
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 308 NENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTVTQATDVEPEQE 460
+E + + T E PA++ P+ T V + + + V + T+V+P +E
Sbjct: 255 SEQVKMAET-AEVKPAEETETTPMVQTEVKLEEETETTPVAETTEVKPAEE 304
>03_06_0195 + 32256771-32258792
Length = 673
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 257 VQQDDNNEI-AGETDDIDNENIAVDSTLVEDSPADQNNPE 373
+ D + EI G+ DDID+E++ + ++ ++ D+ PE
Sbjct: 351 IDTDSDMEIDGGKYDDIDSESLYEEESVSDEQSDDEEEPE 390
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 257 VQQDDNNEI-AGETDDIDNENIAVDSTLVEDSPADQNNPE 373
+ D + EI G+ DDID+E++ + ++ ++ D+ PE
Sbjct: 410 IDTDSDMEIDGGKYDDIDSESLYEEESVSDEQSDDEEEPE 449
>02_03_0406 + 18663986-18664059,18665082-18665405,18665499-18665559,
18666136-18666282,18666368-18666492,18666619-18666648,
18666689-18666893,18667532-18667741,18667886-18667888,
18670034-18670942,18671239-18672069
Length = 972
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 389 PVSISSLSPVSTVTQA-TDVEPEQEVVGQVIRFPCSCISGQCGCCTGAILERFKMKTCGN 565
P S+++L +S + D+E +GQ FP S +G C+ +L R
Sbjct: 874 PSSLANLHFLSNFNISYNDLEGPVPTIGQFSTFPTSSFAGNPKLCSPMLLHRCNSAGAAP 933
Query: 566 ISFVP 580
+S +P
Sbjct: 934 VSTIP 938
>02_02_0706 +
13126176-13126644,13128666-13128867,13129424-13129501,
13131295-13131466
Length = 306
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 224 RSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPV 379
R P+ L ++D+++E E ++ D+E + V+ + ED +N P+PV
Sbjct: 56 REPVATSLGELEEEDEDDEEEEEEEEEDDEEVEVEVEVDEDEFL-KNRPKPV 106
>12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775
Length = 1123
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 308 NENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLS 412
+ N A DS++ ED P + VE+ PV+ SS S
Sbjct: 617 SSNGAPDSSIAEDKPDEPEESLIVEEVPVTASSES 651
>11_01_0389 -
2937242-2939476,2939556-2939666,2941254-2941450,
2941543-2941633
Length = 877
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 254 HVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTVTQ 433
H Q ++N E +GE+ + ++ + S+ + SPA N + ++ ++ S S S +
Sbjct: 756 HEQPEENEEASGESGNDNSLHKTTHSSQTKCSPAVNQNVDADKENGLASSQQSEDSDEIE 815
Query: 434 AT 439
AT
Sbjct: 816 AT 817
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 266 DDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVED 385
DD N+ AG++ I ++ A+D L D AD EPVED
Sbjct: 787 DDENDEAGKSCQIHYDDAAIDRLLDRDQ-AD--GEEPVED 823
>02_04_0469 -
23178589-23178755,23179529-23179697,23179836-23179919,
23180495-23180647,23180798-23180950,23182488-23182589
Length = 275
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +2
Query: 233 ITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLS 412
I L + +D + E ++++ + +AV+S + D+P + PE +TP +
Sbjct: 138 INAALGEQLSAEDEEAVMAEFENLEAQ-LAVES--LPDAPVTEVRPEEKSETPAVTEAAE 194
Query: 413 PVSTVTQATDV 445
+ V + DV
Sbjct: 195 DIDEVIELPDV 205
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,052,294
Number of Sequences: 37544
Number of extensions: 320157
Number of successful extensions: 961
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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