SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4118
         (731 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031482-1|AAH31482.1|  989|Homo sapiens C10orf12 protein protein.     32   2.4  
BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open read...    32   2.4  
AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open read...    32   2.4  
AK023084-1|BAB14396.1|  914|Homo sapiens protein ( Homo sapiens ...    32   2.4  
AC005775-1|AAC62844.1|  382|Homo sapiens vascular addressin MAdC...    32   2.4  
U82483-1|AAC13661.1|  382|Homo sapiens vascular addressin MAdCAM...    31   5.6  
U43342-1|AAC50887.1|  925|Homo sapiens transcription factor NFAT...    30   7.4  
U43341-1|AAC50886.1|  921|Homo sapiens transcription factor NFAT...    30   7.4  
AL132866-2|CAI23549.1|  921|Homo sapiens nuclear factor of activ...    30   7.4  
AL132866-1|CAC00528.2|  925|Homo sapiens nuclear factor of activ...    30   7.4  
AL035684-4|CAI19206.1|  921|Homo sapiens nuclear factor of activ...    30   7.4  
AL035684-3|CAI19205.1|  925|Homo sapiens nuclear factor of activ...    30   7.4  
AL035682-2|CAI18853.1|  921|Homo sapiens nuclear factor of activ...    30   7.4  
AL035682-1|CAI18852.1|  925|Homo sapiens nuclear factor of activ...    30   7.4  
AJ318887-1|CAC83011.2| 1090|Homo sapiens ASPP1 protein protein.        30   9.8  
AB018314-1|BAA34491.1|  948|Homo sapiens KIAA0771 protein protein.     30   9.8  

>BC031482-1|AAH31482.1|  989|Homo sapiens C10orf12 protein protein.
          Length = 989

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 227 SPITIVLPIHV-QQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDT 388
           SP+ +  P+ + + +DN  I+ E +  D + + VD  L E S     NP   E++
Sbjct: 234 SPMGLEPPMSLGKAEDNQSISAEVESGDTQELNVDPLLKESSTFTDENPSETEES 288


>BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open reading
           frame 12 protein.
          Length = 1247

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 227 SPITIVLPIHV-QQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDT 388
           SP+ +  P+ + + +DN  I+ E +  D + + VD  L E S     NP   E++
Sbjct: 400 SPMGLEPPMSLGKAEDNQSISAEVESGDTQELNVDPLLKESSTFTDENPSETEES 454


>AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open reading
           frame 12 protein.
          Length = 1247

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 227 SPITIVLPIHV-QQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDT 388
           SP+ +  P+ + + +DN  I+ E +  D + + VD  L E S     NP   E++
Sbjct: 400 SPMGLEPPMSLGKAEDNQSISAEVESGDTQELNVDPLLKESSTFTDENPSETEES 454


>AK023084-1|BAB14396.1|  914|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13022 fis, clone NT2RP3000753, weakly similar to
           NEUROFILAMENT TRIPLET H PROTEIN. ).
          Length = 914

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 227 SPITIVLPIHV-QQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDT 388
           SP+ +  P+ + + +DN  I+ E +  D + + VD  L E S     NP   E++
Sbjct: 67  SPMGLEPPMSLGKAEDNQSISAEVESGDTQELNVDPLLKESSTFTDENPSETEES 121


>AC005775-1|AAC62844.1|  382|Homo sapiens vascular addressin
           MAdCAM-1 protein.
          Length = 382

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 23/88 (26%), Positives = 40/88 (45%)
 Frame = +2

Query: 215 PILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPV 394
           P+L SP +   P     +  +  + E+ D  ++    D+T  E  P D+ +PEP      
Sbjct: 222 PVLHSPTSPEPPDTTSPESPDTTSPESPDTTSQE-PPDTTSPE--PPDKTSPEPAPQQGS 278

Query: 395 SISSLSPVSTVTQATDVEPEQEVVGQVI 478
           + +  SP ST T+  ++       G+VI
Sbjct: 279 THTPRSPGSTRTRRPEISQAGPTQGEVI 306


>U82483-1|AAC13661.1|  382|Homo sapiens vascular addressin MAdCAM-1
           protein.
          Length = 382

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 23/88 (26%), Positives = 39/88 (44%)
 Frame = +2

Query: 215 PILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPV 394
           P+L SP +   P     +  +  + E+ D  +     D+T  E  P D+ +PEP      
Sbjct: 222 PVLHSPTSPEPPDTTSPESPDTTSPESPDTTSPE-PPDTTSPE--PPDKTSPEPAPQQGS 278

Query: 395 SISSLSPVSTVTQATDVEPEQEVVGQVI 478
           + +  SP ST T+  ++       G+VI
Sbjct: 279 THTPRSPGSTRTRRPEISQAGPTQGEVI 306


>U43342-1|AAC50887.1|  925|Homo sapiens transcription factor NFAT1
           isoform C protein.
          Length = 925

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 176 IPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLV 340
           IP  +WK + DP+P+  +P    LP H+      E  G  +  +  N A +S L+
Sbjct: 318 IPPKMWKTSPDPSPVSAAPSKAGLPRHIY--PAVEFLGPCEQGERRNSAPESILL 370


>U43341-1|AAC50886.1|  921|Homo sapiens transcription factor NFAT1
           isoform B protein.
          Length = 921

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 176 IPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLV 340
           IP  +WK + DP+P+  +P    LP H+      E  G  +  +  N A +S L+
Sbjct: 318 IPPKMWKTSPDPSPVSAAPSKAGLPRHIY--PAVEFLGPCEQGERRNSAPESILL 370


>AL132866-2|CAI23549.1|  921|Homo sapiens nuclear factor of
           activated T-cells, cytoplasmic,rate protein.
          Length = 921

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 176 IPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLV 340
           IP  +WK + DP+P+  +P    LP H+      E  G  +  +  N A +S L+
Sbjct: 318 IPPKMWKTSPDPSPVSAAPSKAGLPRHIY--PAVEFLGPCEQGERRNSAPESILL 370


>AL132866-1|CAC00528.2|  925|Homo sapiens nuclear factor of
           activated T-cells, cytoplasmic,in protein.
          Length = 925

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 176 IPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLV 340
           IP  +WK + DP+P+  +P    LP H+      E  G  +  +  N A +S L+
Sbjct: 318 IPPKMWKTSPDPSPVSAAPSKAGLPRHIY--PAVEFLGPCEQGERRNSAPESILL 370


>AL035684-4|CAI19206.1|  921|Homo sapiens nuclear factor of
           activated T-cells, cytoplasmic,r 1 protein.
          Length = 921

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 176 IPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLV 340
           IP  +WK + DP+P+  +P    LP H+      E  G  +  +  N A +S L+
Sbjct: 318 IPPKMWKTSPDPSPVSAAPSKAGLPRHIY--PAVEFLGPCEQGERRNSAPESILL 370


>AL035684-3|CAI19205.1|  925|Homo sapiens nuclear factor of
           activated T-cells, cytoplasmic,r 1 protein.
          Length = 925

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 176 IPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLV 340
           IP  +WK + DP+P+  +P    LP H+      E  G  +  +  N A +S L+
Sbjct: 318 IPPKMWKTSPDPSPVSAAPSKAGLPRHIY--PAVEFLGPCEQGERRNSAPESILL 370


>AL035682-2|CAI18853.1|  921|Homo sapiens nuclear factor of
           activated T-cells, cytoplasmic,adenine nucleotide
           translocato protein.
          Length = 921

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 176 IPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLV 340
           IP  +WK + DP+P+  +P    LP H+      E  G  +  +  N A +S L+
Sbjct: 318 IPPKMWKTSPDPSPVSAAPSKAGLPRHIY--PAVEFLGPCEQGERRNSAPESILL 370


>AL035682-1|CAI18852.1|  925|Homo sapiens nuclear factor of
           activated T-cells, cytoplasmic,ide 1 protein.
          Length = 925

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 176 IPKIVWKQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLV 340
           IP  +WK + DP+P+  +P    LP H+      E  G  +  +  N A +S L+
Sbjct: 318 IPPKMWKTSPDPSPVSAAPSKAGLPRHIY--PAVEFLGPCEQGERRNSAPESILL 370


>AJ318887-1|CAC83011.2| 1090|Homo sapiens ASPP1 protein protein.
          Length = 1090

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +2

Query: 260 QQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVS 397
           Q   + +  G   D+DN N   +  L E  PA    P P E  P S
Sbjct: 744 QPSPSQDFMGTLADVDNGNTNANGNLEELPPAQPTAPLPAEPAPSS 789


>AB018314-1|BAA34491.1|  948|Homo sapiens KIAA0771 protein protein.
          Length = 948

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +2

Query: 260 QQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVS 397
           Q   + +  G   D+DN N   +  L E  PA    P P E  P S
Sbjct: 602 QPSPSQDFMGTLADVDNGNTNANGNLEELPPAQPTAPLPAEPAPSS 647


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,368,895
Number of Sequences: 237096
Number of extensions: 1887500
Number of successful extensions: 5151
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5135
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -