Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4118
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical ... 39 0.003
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 32 0.36
AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical ... 32 0.36
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 31 0.84
Z73971-2|CAA98252.1| 273|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 30 1.9
AF043693-2|AAB97535.2| 351|Caenorhabditis elegans Hypothetical ... 30 1.9
AF039720-6|AAB96700.1| 347|Caenorhabditis elegans Hypothetical ... 30 1.9
AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 29 3.4
AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical ... 29 3.4
Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF040647-6|AAR30205.3| 436|Caenorhabditis elegans Hypothetical ... 29 4.5
Z77661-12|CAB01191.1| 381|Caenorhabditis elegans Hypothetical p... 28 5.9
Z77658-13|CAB01162.1| 381|Caenorhabditis elegans Hypothetical p... 28 5.9
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical ... 28 5.9
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 28 7.8
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 28 7.8
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 28 7.8
AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical ... 28 7.8
AC006662-2|AAL06035.1| 535|Caenorhabditis elegans Hypothetical ... 28 7.8
AC006662-1|AAM98008.2| 707|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical
protein C09D4.2 protein.
Length = 254
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +2
Query: 488 CSCISGQCGCCTGAILERFKMKTCGNISFVPEDFVFDXXXXXXXXXXXXXXXXXXDPPPI 667
C+C+ G C CC + F+ C N ++ P D +PPP+
Sbjct: 138 CACVHGNCACCLEISVPEFRHSVCVNATYNPVSIGLD-LSIGVDGHYFSEEISLRNPPPV 196
Query: 668 CFN 676
CF+
Sbjct: 197 CFS 199
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 278 EIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPV--STVTQATDVE 448
E+ + + D E + S + PA++ EPVE+ P + SPV ST +A D+E
Sbjct: 760 EVEAQQEPADTEEYPIPSVGTIEEPAEEPAEEPVEE-PEPMDDSSPVDQSTPVKADDIE 817
>AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical
protein C03H5.3 protein.
Length = 287
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +2
Query: 263 QDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTVTQATD 442
+DD++E+ ETD DN + + P +N + +D P+ ISS +PV+++ +
Sbjct: 108 EDDDDEVVPETDYEDNNEEPKNDQNPVEIP---DNSDSDDDEPMEISSKNPVTSIENPEN 164
Query: 443 VEPEQE 460
+ + +
Sbjct: 165 SDSDDD 170
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/81 (20%), Positives = 39/81 (48%)
Frame = +2
Query: 257 VQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTVTQA 436
++QDD+ ++ T++ + ++ + V + D+ PEP S++ + ++T +
Sbjct: 129 IEQDDDGDVMEITEEPNGKSEDTANGTVTEEVLDEEEPEP------SVNGTTEIATEKEP 182
Query: 437 TDVEPEQEVVGQVIRFPCSCI 499
D E G+ ++ P CI
Sbjct: 183 EDSSMPVEQNGKGVKRPVECI 203
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/81 (20%), Positives = 39/81 (48%)
Frame = +2
Query: 257 VQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTVTQA 436
++QDD+ ++ T++ + ++ + V + D+ PEP S++ + ++T +
Sbjct: 129 IEQDDDGDVMEITEEPNGKSEDTANGTVTEEVLDEEEPEP------SVNGTTEIATEKEP 182
Query: 437 TDVEPEQEVVGQVIRFPCSCI 499
D E G+ ++ P CI
Sbjct: 183 EDSSMPVEQNGKGVKRPVECI 203
>Z73971-2|CAA98252.1| 273|Caenorhabditis elegans Hypothetical
protein C50H2.4 protein.
Length = 273
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 155 YNEIKFKIPKIVWKQAFDPTPILRSPITIVLPIH 256
+NEI F P + K F P L P+TI +P H
Sbjct: 237 FNEIYFPSPPMTPKPVFTYIPPLNQPLTIEIPDH 270
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 245 LPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVE-DTPVSISSLSPVS 421
L + QQ ++ A D D ++I D+ V +P P P P + + SPVS
Sbjct: 32 LEMFEQQMNDQAFAQLIHDHDVQHINNDANQVPAAPNTPPVPVPPPVQQPQASPNASPVS 91
Query: 422 TVTQATDVEPEQEVVGQVIR 481
+ + PEQE G + R
Sbjct: 92 VLRRRRYANPEQERFGDISR 111
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 290 ETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVST 424
E D+ D E I +D E+ D+ EPV TP SSL V +
Sbjct: 291 EEDEEDEEEIEMDEE-DEEEEEDEEETEPVAKTPAVKSSLKSVDS 334
>AF043693-2|AAB97535.2| 351|Caenorhabditis elegans Hypothetical
protein C34B2.3 protein.
Length = 351
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 53 TNVFKIMYFRLFILILFIKAYQCD---IEFDKDKEKDYNEI 166
T K++ F LF+L+ K QC F+K EK+YN I
Sbjct: 78 TEAIKMLQFELFVLLTVEKKNQCKQFCKLFEKGNEKEYNWI 118
>AF039720-6|AAB96700.1| 347|Caenorhabditis elegans Hypothetical
protein F33D11.7 protein.
Length = 347
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 53 TNVFKIMYFRLFILILFIKAYQCD---IEFDKDKEKDYNEI 166
T K++ F LF+L+ K QC F+K EK+YN I
Sbjct: 77 TEAIKMLQFELFVLLTVEKKNQCKQFCKLFEKGNEKEYNWI 117
>AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical
protein Y56A3A.30 protein.
Length = 767
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 254 HVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPV 394
H Q +DN I TD N+ + D+ +DQN+ +P D P+
Sbjct: 426 HAQLEDNCTIQPSTDPSSNDQLG-------DNTSDQNSTDPSSDVPM 465
>AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical
protein K08A2.1 protein.
Length = 411
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +2
Query: 248 PIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTV 427
P+ V +D++E E ++D+ + D D P + + V+D P SPV T
Sbjct: 208 PVVVTLEDSDEEKDE--EVDSGIVMDDMDETMDEPMEVDESHDVQDLPQLQKDPSPVPTA 265
Query: 428 TQATDVEP 451
T P
Sbjct: 266 PDVTSESP 273
>Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical
protein C49F8.2 protein.
Length = 771
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 32 VSVISIMTNVFKIMYFRLFILILFIKAYQCDIEFDKDKEKDYNEIKFK 175
VS I I+ F +MYF + ++ FIK D+E++ DK D+ KF+
Sbjct: 229 VSDIRIILIFFAVMYFVIAVIGFFIK----DVEWESDK-TDFKLRKFQ 271
>AF040647-6|AAR30205.3| 436|Caenorhabditis elegans Hypothetical
protein F54D12.7 protein.
Length = 436
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 457 RGSWASDSISMLMYFWTMRLLYWSYT*KIQNE 552
+GS ++S++ Y W + LYW +I NE
Sbjct: 273 QGSTTGSTVSLIFYPWDVLKLYWLEKTRISNE 304
>Z77661-12|CAB01191.1| 381|Caenorhabditis elegans Hypothetical
protein F40G12.11 protein.
Length = 381
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Frame = +2
Query: 266 DDNNEIAGETDDIDN--------ENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVS 421
D E E ++DN E D TLV++ P + + EP+++ P+ S P
Sbjct: 297 DSRKEGESEVSEMDNVALDKDLPEETETDKTLVDEIPLEDLDKEPLDENPLE-GSPGPAQ 355
Query: 422 TVTQ 433
+T+
Sbjct: 356 NMTE 359
>Z77658-13|CAB01162.1| 381|Caenorhabditis elegans Hypothetical
protein F40G12.11 protein.
Length = 381
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Frame = +2
Query: 266 DDNNEIAGETDDIDN--------ENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVS 421
D E E ++DN E D TLV++ P + + EP+++ P+ S P
Sbjct: 297 DSRKEGESEVSEMDNVALDKDLPEETETDKTLVDEIPLEDLDKEPLDENPLE-GSPGPAQ 355
Query: 422 TVTQ 433
+T+
Sbjct: 356 NMTE 359
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Frame = +2
Query: 158 NEIKFKIPKIVWKQAFDPTPILRSPITIVLPIHVQQD----DNNEIAGETDDIDNENIAV 325
+ K+ + +WKQ DP R + +P+ ++Q DN+ + +
Sbjct: 209 HHFNIKMLENLWKQPMDPYAKARLIRDLAVPLSLRQRKWMLDNDRL---NLKLSLNGFVE 265
Query: 326 DSTLVEDSPADQNNPEPVED-TPVSISSLSPVSTVTQATDVEPEQEVVGQVIRFP 487
D +V D PA ++ P TP SP S + +++P + QV+ P
Sbjct: 266 DWDIVPDQPAPRSKILPWRPRTPAGHRDRSPSSPMAHLDNIQPPSPI--QVVSNP 318
>AF016673-4|AAB66125.2| 743|Caenorhabditis elegans Hypothetical
protein T06D4.3 protein.
Length = 743
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/47 (17%), Positives = 27/47 (57%)
Frame = +2
Query: 269 DNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSL 409
D++ ++ +++ ++ + T+ +D+P D+N P+ ++ + S+
Sbjct: 277 DDDLVSDYAKEVEKLDVELKKTIFKDNPVDENQPKTLDTLKTFVPSI 323
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 194 KQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPE 373
K F P P ++ P T P + D E + + DN+ + +D V++ PA + P
Sbjct: 657 KPDFPPVPRIQKPSTSSQPPPPEPMDTKENESDDGEEDNDILEID---VDEPPAKRPTPT 713
Query: 374 PVEDTPVSISSL 409
+ SS+
Sbjct: 714 SSSSHLIGSSSV 725
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 194 KQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPE 373
K F P P ++ P T P + D E + + DN+ + +D V++ PA + P
Sbjct: 657 KPDFPPVPRIQKPSTSSQPPPPEPMDTKENESDDGEEDNDILEID---VDEPPAKRPTPT 713
Query: 374 PVEDTPVSISSL 409
+ SS+
Sbjct: 714 SSSSHLIGSSSV 725
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 194 KQAFDPTPILRSPITIVLPIHVQQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPE 373
K F P P ++ P T P + D E + + DN+ + +D V++ PA + P
Sbjct: 657 KPDFPPVPRIQKPSTSSQPPPPEPMDTKENESDDGEEDNDILEID---VDEPPAKRPTPT 713
Query: 374 PVEDTPVSISSL 409
+ SS+
Sbjct: 714 SSSSHLIGSSSV 725
>AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical
protein ZC581.3 protein.
Length = 691
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/60 (21%), Positives = 29/60 (48%)
Frame = +2
Query: 260 QQDDNNEIAGETDDIDNENIAVDSTLVEDSPADQNNPEPVEDTPVSISSLSPVSTVTQAT 439
Q+++ + +D + E + + + +DS + + P E+T S+ S S S ++T
Sbjct: 217 QEEERRRRIDDDEDYEEELTTIVNDMEDDSSYTKTSTMPTEETTNSLESTSSESFTAEST 276
>AC006662-2|AAL06035.1| 535|Caenorhabditis elegans Hypothetical
protein H23L24.3a protein.
Length = 535
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 215 PILRSPITIVLPIHVQQDDNNEIAGETDDIDN 310
P++R + +VL + ++ NN + GET +D+
Sbjct: 307 PLVRDTLLLVLGLMEEEYQNNSLKGETKSLDD 338
>AC006662-1|AAM98008.2| 707|Caenorhabditis elegans Hypothetical
protein H23L24.3b protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 215 PILRSPITIVLPIHVQQDDNNEIAGETDDIDN 310
P++R + +VL + ++ NN + GET +D+
Sbjct: 479 PLVRDTLLLVLGLMEEEYQNNSLKGETKSLDD 510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,682,947
Number of Sequences: 27780
Number of extensions: 323742
Number of successful extensions: 1223
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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