Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4115
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 145 3e-35
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 145 3e-35
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 131 4e-31
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 110 1e-24
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 84 8e-17
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 48 9e-06
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 48 9e-06
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 48 9e-06
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 31 1.1
U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical pr... 29 4.5
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 28 7.8
AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical ... 28 7.8
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 7.8
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 145 bits (351), Expect = 3e-35
Identities = 70/132 (53%), Positives = 97/132 (73%)
Frame = +2
Query: 128 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTL 307
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 308 LCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 487
LC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 488 VVICLQSLGRKA 523
V+ICL SL RK+
Sbjct: 125 VLICLASLARKS 136
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1
Query: 616 VISLQYGSNKGANQSGINFGNTRHM 690
VI LQ GSNKGA SG+N GNTRHM
Sbjct: 168 VIGLQMGSNKGATASGLNMGNTRHM 192
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 534 GKPSIGPKEAEKNVRNFSEEQLRAG 608
G+ +GPKEA+ + R +++EQL+AG
Sbjct: 141 GRSGLGPKEAQGDRREWTDEQLKAG 165
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 145 bits (351), Expect = 3e-35
Identities = 70/132 (53%), Positives = 97/132 (73%)
Frame = +2
Query: 128 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTL 307
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 308 LCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 487
LC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 488 VVICLQSLGRKA 523
V+ICL SL RK+
Sbjct: 125 VLICLASLARKS 136
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1
Query: 616 VISLQYGSNKGANQSGINFGNTRHM 690
VI LQ GSNKGA SG+N GNTRHM
Sbjct: 168 VIGLQMGSNKGATASGLNMGNTRHM 192
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 534 GKPSIGPKEAEKNVRNFSEEQLRAG 608
G+ +GPKEA+ + R +++EQL+AG
Sbjct: 141 GRSGLGPKEAQGDRREWTDEQLKAG 165
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 131 bits (317), Expect = 4e-31
Identities = 66/135 (48%), Positives = 89/135 (65%)
Frame = +2
Query: 134 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLC 313
NR T G ++K +SK+ ++ A LEWI+ ++GE +TSG+ DNF+ +LKDGTLLC
Sbjct: 3 NRTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLC 62
Query: 314 KLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 493
K AN I IKK+ F CMENINAF+E A++ GVP +ETFQ+V+L E ++L SV
Sbjct: 63 KAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVC 122
Query: 494 ICLQSLGRKAGTYGK 538
+ L SLGR GK
Sbjct: 123 VTLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 110 bits (264), Expect = 1e-24
Identities = 61/134 (45%), Positives = 77/134 (57%)
Frame = +2
Query: 134 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLC 313
+R +G A K SK+++ A LEWIR +T E + DNF E LKDG LC
Sbjct: 6 HRPRPAGMAGAILDKQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLC 65
Query: 314 KLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 493
KL N I +KKI F C+ENIN F AAR LGV +ETFQ+VDL++ ++L SV
Sbjct: 66 KLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVT 125
Query: 494 ICLQSLGRKAGTYG 535
+ LQSL RK G
Sbjct: 126 VTLQSLARKVEKLG 139
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 84.2 bits (199), Expect = 8e-17
Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Frame = +2
Query: 134 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGE----PENTSGDMDNFYEVLKDG 301
N G + E Q+K ++++ E A E L+WI +TGE T + +LKDG
Sbjct: 3 NHGPSYGLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDG 62
Query: 302 TLLCKLANNIHPNMIKKINTS-SMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQN 478
+LCKL + P+ N MAF MENI+ FL AA+Q GV FQTVDL+E +
Sbjct: 63 VMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQ 122
Query: 479 LNSVVICLQSLGRKA 523
V+ CL+ L A
Sbjct: 123 CYKVIECLRLLAAVA 137
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +1
Query: 568 RTCETSPRSSSGLV--RG--VISLQYGSNKGANQSGIN 669
+ ++SPR V RG VI LQYG+NK A+Q G++
Sbjct: 152 KLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGMS 189
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Frame = +2
Query: 224 WIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 391
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 73
Query: 392 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKAVN 547
IN F + + + F DL+ V+ L L + + V+
Sbjct: 74 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFLSHTKESLSRGVD 126
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Frame = +2
Query: 224 WIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 391
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 392 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKAVN 547
IN F + + + F DL+ V+ L L + + V+
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFLSHTKESLSRGVD 158
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Frame = +2
Query: 224 WIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 391
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 392 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKAVN 547
IN F + + + F DL+ V+ L L + + V+
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFLSHTKESLSRGVD 158
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 263 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINT--SSMA-FKCMENINAFLEAARQLGVP 433
GD+ +F L DG LCK N +HP I ++ SS+A + N++ FL+ R++GVP
Sbjct: 540 GDI-SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVP 598
Query: 434 AQETFQTVDLWERQNLNSV 490
+D+ ++N V
Sbjct: 599 ETTLCSQMDIISKRNPQKV 617
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 610 RGVISLQYGSNKGANQSGI-NFGNTRH 687
+G I LQ G+NK ANQ+G+ FG RH
Sbjct: 238 QGFIHLQMGTNKFANQAGMTGFGMPRH 264
>U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical
protein C08A9.6 protein.
Length = 344
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 253 EHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRK 417
EHL + S + +S PP+ D QHI G QVH + ++P K
Sbjct: 244 EHLPDSSAKIYSTNIKSASCAPESTEPPKSDNSAQHI--GEQVHRLFAQYPERSK 296
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 245 EPENTSGDMDNFYEVLKDGTLLCKL 319
E ++SG +++ +E ++DG LLC L
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHL 62
>AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical
protein M151.6 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -3
Query: 222 SKDSWASSSLYLLLIFLWASAANPDL--VARLFAMSN**QFNK--LFK*ITDTVEGEVTV 55
+KDS SS + LL+ W +NP L + LF+ +N + + +F ITD + EV
Sbjct: 262 TKDSQFSSKDFNLLLKNWLRGSNPYLLNIVMLFSEANENRLVETIIFDGITDCIALEVQG 321
Query: 54 YRM*TGRRVNGTR 16
+ T + +GT+
Sbjct: 322 MKQFTVEKHDGTK 334
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 245 EPENTSGDMDNFYEVLKDGTLLCKL 319
E ++SG +++ +E ++DG LLC L
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHL 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,312,210
Number of Sequences: 27780
Number of extensions: 407945
Number of successful extensions: 1197
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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