Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4113
         (766 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   3.4  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   4.5  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   4.5  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    24   5.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.9  
EF519347-1|ABP68456.1|  470|Anopheles gambiae LRIM1 protein.           23   7.8  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 753 LFKDTKRDWCTQYSLNSITLFAPMISYDGVN 661
           + K + ++ C QYS NSI +       DG N
Sbjct: 296 ILKSSAQNICNQYSANSIMVTGRQARRDGRN 326


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 13  IFYLYSLVSFFTD*TVTVNLIMKLISLMA*KRVLHLIVFFLILMNMKFLI 162
           ++ +Y LV FFT    T   + ++I   A  + + L V     M++ F+I
Sbjct: 305 MYGIYCLVIFFTTIIATYGSLSEIIEHGATYKEVGLFVIVFYCMSLLFII 354


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +1

Query: 472 EHEELFRNNFIPILSIFVIKQ*SVPSFNHGQLLHNTI*IFDVTPFSERLIQNYKNMFV 645
           EH+ LF+      +    I + +VP+  + Q L NTI + D+  F+    Q+  N+F+
Sbjct: 435 EHKHLFQGKIYEPM----ILELNVPALENVQFLENTIGVRDLIAFTCESTQD-MNLFL 487


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 250 DSVTRFRMAWLSCNIFNNLCIRPTPWT 170
           D  TRFR  +L+ +   +  +RP  WT
Sbjct: 265 DVATRFRAEYLNSSDRADRTVRPARWT 291


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 180  VGRIHRLLKMLQDNQAIRNRVTLSLSLLFGAKVMNVTVPFLF 305
            VGR+ RL+K  +  + +   + +SL  LF   ++   V F+F
Sbjct: 1725 VGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIF 1766


>EF519347-1|ABP68456.1|  470|Anopheles gambiae LRIM1 protein.
          Length = 470

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 219 YPVTFLIICVFALLHG 172
           Y V  L++CV A +HG
Sbjct: 7   YQVVLLLVCVTATVHG 22


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,137
Number of Sequences: 2352
Number of extensions: 16832
Number of successful extensions: 102
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)