Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4113
         (766 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009918-1|AAP88920.1|  753|Homo sapiens ATP-binding cassette, s...    60   9e-09
BC006323-1|AAH06323.1|  753|Homo sapiens ATP-binding cassette, s...    60   9e-09
AL360179-2|CAH70564.1|  753|Homo sapiens ATP-binding cassette, s...    60   9e-09
AL360179-1|CAH70565.1|  752|Homo sapiens ATP-binding cassette, s...    60   9e-09
AL359545-2|CAI41574.1|  753|Homo sapiens ATP-binding cassette, s...    60   9e-09
AL359545-1|CAI41573.1|  752|Homo sapiens ATP-binding cassette, s...    60   9e-09
AF241887-1|AAK20173.1|  752|Homo sapiens ATP binding cassette 7 ...    60   9e-09
AF133659-1|AAD33045.1|  752|Homo sapiens ATP-binding cassette 7 ...    60   9e-09
AF078777-1|AAD47141.1|  748|Homo sapiens ABC transporter protein.      60   9e-09
AB005289-1|BAA28861.1|  752|Homo sapiens ABC transporter 7 prote...    60   9e-09
BX537833-1|CAD97847.1|  168|Homo sapiens hypothetical protein pr...    42   0.002

>BT009918-1|AAP88920.1|  753|Homo sapiens ATP-binding cassette,
           sub-family B (MDR/TAP), member 7 protein.
          Length = 753

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 132 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 186

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 187 ATMATAVLIG 196


>BC006323-1|AAH06323.1|  753|Homo sapiens ATP-binding cassette,
           sub-family B (MDR/TAP), member 7 protein.
          Length = 753

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 132 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 186

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 187 ATMATAVLIG 196


>AL360179-2|CAH70564.1|  753|Homo sapiens ATP-binding cassette,
           sub-family B (MDR/TAP), member 7 protein.
          Length = 753

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 132 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 186

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 187 ATMATAVLIG 196


>AL360179-1|CAH70565.1|  752|Homo sapiens ATP-binding cassette,
           sub-family B (MDR/TAP), member 7 protein.
          Length = 752

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 131 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 185

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 186 ATMATAVLIG 195


>AL359545-2|CAI41574.1|  753|Homo sapiens ATP-binding cassette,
           sub-family B (MDR/TAP), member 7 protein.
          Length = 753

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 132 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 186

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 187 ATMATAVLIG 196


>AL359545-1|CAI41573.1|  752|Homo sapiens ATP-binding cassette,
           sub-family B (MDR/TAP), member 7 protein.
          Length = 752

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 131 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 185

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 186 ATMATAVLIG 195


>AF241887-1|AAK20173.1|  752|Homo sapiens ATP binding cassette 7
           protein.
          Length = 752

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 131 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 185

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 186 ATMATAVLIG 195


>AF133659-1|AAD33045.1|  752|Homo sapiens ATP-binding cassette 7
           iron transporter protein.
          Length = 752

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 131 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 185

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 186 ATMATAVLIG 195


>AF078777-1|AAD47141.1|  748|Homo sapiens ABC transporter protein.
          Length = 748

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 127 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 181

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 182 ATMATAVLIG 191


>AB005289-1|BAA28861.1|  752|Homo sapiens ABC transporter 7 protein
           protein.
          Length = 752

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQAL 392
           +D   +R RV +SL  L GAK MN+ VPF+FKYAVD +NQ++       +L ++  P  +
Sbjct: 131 KDRPDLRARVAISLGFLGGAKAMNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTV 185

Query: 393 GTTAFSLLVG 422
            T A ++L+G
Sbjct: 186 ATMATAVLIG 195


>BX537833-1|CAD97847.1|  168|Homo sapiens hypothetical protein
           protein.
          Length = 168

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = +3

Query: 279 MNVTVPFLFKYAVDEVNQVATTPAGDALLGMATVPQALGTTAFSLLVG 422
           MN+ VPF+FKYAVD +NQ++       +L ++  P  + T A ++L+G
Sbjct: 115 MNIVVPFMFKYAVDSLNQMSGN-----MLNLSDAPNTVATMATAVLIG 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,503,321
Number of Sequences: 237096
Number of extensions: 2319000
Number of successful extensions: 4319
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4319
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)