Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4113
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051556-1|AAK92980.1|  606|Drosophila melanogaster GH20617p pro...    50   3e-06
AE014296-305|AAF47526.1|  606|Drosophila melanogaster CG7955-PC,...    50   3e-06
AE014296-303|AAF47524.3|  709|Drosophila melanogaster CG7955-PB,...    50   3e-06
AE014296-302|AAF47525.2|  743|Drosophila melanogaster CG7955-PA,...    50   3e-06

>AY051556-1|AAK92980.1|  606|Drosophila melanogaster GH20617p
           protein.
          Length = 606

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 25/55 (45%), Positives = 36/55 (65%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMAT 377
           +++  +R RV +SL LL G+K++ V VPFLFK AVD +  +    A DA+L  AT
Sbjct: 12  KEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVDTMTTLNMDTAPDAVLSAAT 66


>AE014296-305|AAF47526.1|  606|Drosophila melanogaster CG7955-PC,
           isoform C protein.
          Length = 606

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 25/55 (45%), Positives = 36/55 (65%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMAT 377
           +++  +R RV +SL LL G+K++ V VPFLFK AVD +  +    A DA+L  AT
Sbjct: 12  KEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVDTMTTLNMDTAPDAVLSAAT 66


>AE014296-303|AAF47524.3|  709|Drosophila melanogaster CG7955-PB,
           isoform B protein.
          Length = 709

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 25/55 (45%), Positives = 36/55 (65%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMAT 377
           +++  +R RV +SL LL G+K++ V VPFLFK AVD +  +    A DA+L  AT
Sbjct: 115 KEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVDTMTTLNMDTAPDAVLSAAT 169


>AE014296-302|AAF47525.2|  743|Drosophila melanogaster CG7955-PA,
           isoform A protein.
          Length = 743

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 25/55 (45%), Positives = 36/55 (65%)
 Frame = +3

Query: 213 QDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMAT 377
           +++  +R RV +SL LL G+K++ V VPFLFK AVD +  +    A DA+L  AT
Sbjct: 149 KEDPLVRKRVGISLGLLAGSKLLTVCVPFLFKGAVDTMTTLNMDTAPDAVLSAAT 203


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,359,411
Number of Sequences: 53049
Number of extensions: 703515
Number of successful extensions: 1446
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)