Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4111
(659 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_08_0073 - 28155156-28155296,28155422-28155682,28155858-281559... 174 6e-44
07_01_0908 + 7653813-7653849,7655220-7655350,7655946-7656020,765... 149 1e-36
10_08_0366 - 17232010-17232061,17232546-17232601,17232692-172327... 100 2e-21
03_05_0445 - 24401899-24401992,24402098-24402162,24402262-244022... 47 2e-12
03_01_0057 + 476172-476283,476337-476449,476532-476634,477089-47... 64 9e-11
07_03_0370 - 17366063-17366197,17367445-17367483,17367930-173680... 57 1e-08
06_03_0904 + 25832026-25832643 54 8e-08
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 36 0.022
01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-17... 35 0.050
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587... 35 0.066
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 31 1.1
10_08_0409 - 17710118-17710624,17711003-17711701,17711828-17712121 29 3.3
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 29 3.3
11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243... 29 4.3
08_02_1525 + 27661094-27661801 28 5.7
07_01_0434 - 3302926-3303072,3303402-3303545,3303644-3304293,330... 28 5.7
06_02_0030 - 10764829-10764875,10764983-10765045,10765242-107653... 28 5.7
05_01_0115 + 804674-804766,805729-806442 28 7.6
>11_08_0073 -
28155156-28155296,28155422-28155682,28155858-28155962,
28156563-28156693,28156905-28156941
Length = 224
Score = 174 bits (423), Expect = 6e-44
Identities = 79/138 (57%), Positives = 113/138 (81%)
Frame = +2
Query: 239 MEWLFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVK 418
M ++FG + TP E+LR+N+R L+K++R+++RER ++ QEKK+IA+IKK+AK+GQM AVK
Sbjct: 1 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLIAEIKKVAKQGQMGAVK 60
Query: 419 IMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMP 598
IMAKDL+RTR + KF +K+ +Q VSL+IQTLKS M +AMKGVT+AM MNRQ+N+P
Sbjct: 61 IMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMRQMNRQMNLP 120
Query: 599 QIQKILQEFEKQSEIMDM 652
+QKI++EFE Q+E M++
Sbjct: 121 ALQKIMREFEIQNEKMEI 138
>07_01_0908 +
7653813-7653849,7655220-7655350,7655946-7656020,
7657007-7657111,7657648-7657911,7658474-7658614
Length = 250
Score = 149 bits (362), Expect = 1e-36
Identities = 78/163 (47%), Positives = 110/163 (67%), Gaps = 25/163 (15%)
Frame = +2
Query: 239 MEWLFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMD--- 409
M +LFG + TP E+LR+N+R L++++R+++RER ++ QEKK+I +IKK AKEGQM
Sbjct: 1 MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITEIKKTAKEGQMKLDN 60
Query: 410 ----------------------AVKIMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKS 523
AVK+MAKDL+RTR + KF +K+ +Q VSL++QTLKS
Sbjct: 61 LPMKWWKVVDEQFHFAAKNGQGAVKVMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKS 120
Query: 524 QSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFEKQSEIMDM 652
M AMKGVT+AM MNRQLN+P +Q+I+ EFE+Q+E M+M
Sbjct: 121 TQAMGDAMKGVTKAMGQMNRQLNLPGLQRIMMEFERQNERMEM 163
>10_08_0366 -
17232010-17232061,17232546-17232601,17232692-17232727,
17232861-17232941,17233060-17233131,17233394-17233465,
17233555-17233659,17233754-17233804,17234075-17234109,
17234692-17234736,17234940-17234973
Length = 212
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/134 (32%), Positives = 84/134 (62%)
Frame = +2
Query: 251 FGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAK 430
F K TP E +R ++R L A R ++R+ ++ +EK+++A+IK+ AK G A +I+A+
Sbjct: 4 FAKKPTPREAIRSSKRELTNATRGIERDIGTLQLEEKRLVAEIKRTAKTGNEAATRILAR 63
Query: 431 DLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQK 610
L+R R+ + +A I+ ++ Q + + +++A M+ ++AM +N+Q++ + K
Sbjct: 64 QLIRLRQQISNLQGSRAQIRGIATHTQAMHANTSVAAGMQSASKAMGALNKQMDPAKQMK 123
Query: 611 ILQEFEKQSEIMDM 652
++QEF+KQS MDM
Sbjct: 124 VMQEFQKQSAQMDM 137
>03_05_0445 -
24401899-24401992,24402098-24402162,24402262-24402297,
24402419-24402499,24403084-24403155,24403265-24403336,
24403628-24403678,24404374-24404408,24404615-24404659,
24405067-24405100
Length = 194
Score = 47.2 bits (107), Expect(2) = 2e-12
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +2
Query: 248 LFGHKMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEG 400
+F K+ P E LR ++R ++ A R ++RE ++ +EKK++A+IKK AK G
Sbjct: 3 IFKKKVDPKEALRTSKREMSVATRGVEREIGSLQMEEKKLVAEIKKTAKTG 53
Score = 42.7 bits (96), Expect(2) = 2e-12
Identities = 17/48 (35%), Positives = 34/48 (70%)
Frame = +2
Query: 509 QTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFEKQSEIMDM 652
+ + + ++++ MKG ++AMA MN+Q+ + K+++EF+KQS +DM
Sbjct: 55 EAMYAGTSISAGMKGASKAMAAMNKQMEPTKQIKVMREFQKQSNQLDM 102
>03_01_0057 +
476172-476283,476337-476449,476532-476634,477089-477210,
477303-477497,477627-477701,478082-478179,478328-478421
Length = 303
Score = 64.1 bits (149), Expect = 9e-11
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Frame = +2
Query: 260 KMTPDEMLRKNQRALNKAMRDLDRERMKM------------EQQEKKVIADIKKLAKEGQ 403
K TP + LR+ QR L R++DR+ M +++EKKV I++ AK
Sbjct: 11 KPTPQQQLREWQRRLRNEGRNIDRQIRAMMLMVESGASADVQREEKKVEKSIREAAKRND 70
Query: 404 MDAVKIMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNR 583
+ + K +AK++VR+R+ V + KA + ++S+ + + + + + T M +N
Sbjct: 71 IGSAKALAKEVVRSRKAVNRLYENKAQLNSISMHLGEIVATARTVGHLSKSTEVMKLVNN 130
Query: 584 QLNMPQIQKILQEFEKQ 634
+ P++ +QEF K+
Sbjct: 131 LMKAPEVAATMQEFSKE 147
>07_03_0370 -
17366063-17366197,17367445-17367483,17367930-17368001,
17368287-17368478,17368660-17368781,17369394-17369496,
17370786-17370836,17371199-17371275,17371646-17371757
Length = 300
Score = 56.8 bits (131), Expect = 1e-08
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Frame = +2
Query: 266 TPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKI-------- 421
TP + LR+ QR L R LDR+ ++++EK V I++ AK + + K+
Sbjct: 13 TPQQQLREWQRKLRNECRVLDRQIRDVQREEKNVEKSIREAAKRNDIGSAKLLSNYEQRT 72
Query: 422 ---------MAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMAT 574
+AK+LVR+RR V + KA + +VS+ + + + + + M
Sbjct: 73 LLVLYPTMALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVATARTVGHLSKSAEVMKI 132
Query: 575 MNRQLNMPQIQKILQEFEKQ 634
+N + P++ +QEF K+
Sbjct: 133 VNNLMKAPELAATMQEFSKE 152
>06_03_0904 + 25832026-25832643
Length = 205
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/113 (21%), Positives = 60/113 (53%)
Frame = +2
Query: 317 RDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKANIQAV 496
+ L R+ K E++EK+ +KK ++G MD +I A++ +R R ++ + + + AV
Sbjct: 19 KSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIRKRTEHMNYLRLASRLDAV 78
Query: 497 SLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKILQEFEKQSEIMDMK 655
++ T + ++M + +++ + N+ ++ + + FE+Q M+++
Sbjct: 79 VARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDNFERQFVNMEVQ 131
>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
Length = 203
Score = 36.3 bits (80), Expect = 0.022
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Frame = +2
Query: 254 GHKMTPDEML----RKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQM-DAVK 418
G K +E+L ++ + AL +A +RER + E+ EKK+ + KK A+E QM +A++
Sbjct: 88 GRKRIHEEVLVQIEKEKEAALVEAQHKAERERKEREELEKKLEEERKK-AEEAQMKEAME 146
Query: 419 IMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNM 595
K+L RY L K +A+ K + Q + G ++ ++ L M
Sbjct: 147 QQQKEL---ERYQELERLQKEREEAMKRKQMEEEQQKQSQMKLLGKNKSRPKLSFALGM 202
>01_01_0022 -
170045-170095,170406-170554,170764-170875,171398-171469,
171578-171671,171770-171921,172004-172072
Length = 232
Score = 35.1 bits (77), Expect = 0.050
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 6/144 (4%)
Frame = +2
Query: 239 MEWLFGHKMT--PDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDA 412
M+ +FG K + P ++ +NK +D + K++++ + I+K DA
Sbjct: 1 MKKIFGAKKSKDPPPSIQDATERINKRGESVDDKIKKLDEELGRYKEQIRKTRPGPSQDA 60
Query: 413 VKIMAKDLVRTRRYV--RKFMLMKA--NIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMN 580
+K A L++ +R ++ ML N+ V+ LK AMK + + M
Sbjct: 61 IKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELKGMM 120
Query: 581 RQLNMPQIQKILQEFEKQSEIMDM 652
+ + + I + E +++MD+
Sbjct: 121 KTVKIEDIDNMQDE---MTDLMDV 141
>08_02_1091 + 24256025-24256190,24256806-24257978,24258066-24258733,
24258994-24260065,24260241-24260563,24260647-24260835,
24261400-24261506,24262103-24262163,24262617-24262634
Length = 1258
Score = 34.7 bits (76), Expect = 0.066
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +2
Query: 275 EMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRRY 454
E ++N+R + KA +L+RER+K E+++K +K++ ++ + DA K +D R +
Sbjct: 1046 EQKKQNEREMRKAAAELERERVKQEREQK-----LKQMEQKKKTDARKRQWEDDGRKEKE 1100
Query: 455 VRK 463
+K
Sbjct: 1101 KKK 1103
>09_04_0512 + 18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 275 EMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKK 385
E ++N+R + KA L+RER+K E++ K+ + KK
Sbjct: 1339 EEKKQNEREMRKAAAKLERERLKQEKELKQKQEEQKK 1375
>10_08_0409 - 17710118-17710624,17711003-17711701,17711828-17712121
Length = 499
Score = 29.1 bits (62), Expect = 3.3
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = +2
Query: 284 RKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEG--QMDAVKIMAKDLVRTRRYV 457
+ Q A NKA D+ ERMK E K+ +EG + +A K+ A+ V + R
Sbjct: 189 KTQQEAANKAKVDVAEERMKGEVGAKE---------REGLTRQNAAKVDAETKVVSVRQQ 239
Query: 458 RKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLNMPQIQKI----LQEF 625
+ +A ++A +++ + ++ +A A G+ A +Q + Q++ + ++E
Sbjct: 240 GIGLREEAKVKA-EVQVYENEREAEIAAAQAGLAMKKAGWEKQSKVAQVEAVKAVAIREA 298
Query: 626 EKQSEI 643
E Q E+
Sbjct: 299 ELQMEV 304
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/120 (17%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = +2
Query: 272 DEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRR 451
++ + K L+ ++ + + K+E++EKK+ +K++ ++ K++ V+
Sbjct: 279 EDDINKRLAELHLQEKEAESKNRKLEEREKKIAEREEKVSAREKVGLQKLLEDHNVKLES 338
Query: 452 YVRKFMLMKANIQAVSLKIQTLKSQSTMAQAMKGVTRAMATMNRQLN-MPQIQKILQEFE 628
R F L N + S ++ ++ + Q K V + ++++ + + +K L+E++
Sbjct: 339 KRRDFDLQLEN-EKKSFDAMLVQKEADLVQREKDVRSSEEKLSKKEQVLNESKKKLEEWQ 397
>11_06_0760 +
27017956-27018433,27018487-27019234,27023760-27024378,
27030755-27032440
Length = 1176
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 308 KAMRDLDRERMKMEQQEKKVIADIKKLAKEGQMDAVKIMAKDLVRTRR 451
K +++ E + E+K I D ++ +EGQ + KD+VR RR
Sbjct: 473 KLFNEVESESRISKDGERKEIDDGEQKEREGQQKEIDGEQKDIVRPRR 520
>08_02_1525 + 27661094-27661801
Length = 235
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/104 (19%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +2
Query: 359 KKVIADIKKLAKEGQMDAVKIMAKDLVRTRRYVRKFMLMKANIQAVSLKIQTLKSQSTMA 538
K +I D++ ++G AV+ + +R + +K K ++ V + K ++
Sbjct: 98 KAIIQDLQVSLRKGDNAAVQTKIQSYIRLVKKAKKHS--KKTVKKVVSDKEECKIVKLLS 155
Query: 539 QAMKGVTRAMAT----MNRQLNMPQIQKILQEFEKQSEIMDMKE 658
+A + T + +++Q+ MP++ I + F+K++ ++ +E
Sbjct: 156 EAREITTSLFESTIHLLSKQIAMPKLSLISKAFQKKNSVICNEE 199
>07_01_0434 -
3302926-3303072,3303402-3303545,3303644-3304293,
3304410-3304493,3304651-3304703,3305127-3305197,
3305285-3305362,3305775-3305903,3305988-3306044,
3306693-3306923,3307748-3307882,3308609-3308684,
3308768-3309024,3309095-3309202,3309328-3309526,
3309600-3309604
Length = 807
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 269 PDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEG 400
PDEML ++ N ++ +++ EQQ VI+ K L ++G
Sbjct: 295 PDEMLDMAEKLANANPEEVAAMKVQAEQQMSYVISGAKMLKQQG 338
>06_02_0030 -
10764829-10764875,10764983-10765045,10765242-10765331,
10765510-10765534
Length = 74
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 397 RTNGCC*NHGKRLSTYQTICPQVHVNESEHPSGVTEDTNSQVSEH 531
+ C + K S YQ I + + G ED+NS+V++H
Sbjct: 11 KEKNCISSKKKNSSNYQNIVEDKQLQSTGFKDGNNEDSNSRVTKH 55
>05_01_0115 + 804674-804766,805729-806442
Length = 268
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 245 WLFGHKMTPDEMLRKNQRALNKAMRDLD--RERMKMEQQEKKVIAD-IKKLAKE 397
W F + P E + + +++L +LD +E +K ++Q +AD ++ +AKE
Sbjct: 21 WAFQDDLQPQESMEELKQSLMATTLELDAAKEELKKKEQSIAKLADLVRHVAKE 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,769,696
Number of Sequences: 37544
Number of extensions: 297500
Number of successful extensions: 746
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -