Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4109
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90986-1|CAA62473.1|  535|Drosophila melanogaster pipsqueak prot...    31   2.0  
AE013599-1144|AAX52711.1|  535|Drosophila melanogaster CG2368-PL...    30   3.6  

>X90986-1|CAA62473.1|  535|Drosophila melanogaster pipsqueak
           protein.
          Length = 535

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 567 YFQLVVPCGIHCVVYLVFR*AAAWLCPWHC*SPWATVTTH-HQVGP 701
           +  L +P  +   +++  R AA W CPW     W +  +H H + P
Sbjct: 464 FANLTIPISLSTRIWIACRTAACWACPW---DSWTSHPSHQHHLPP 506


>AE013599-1144|AAX52711.1|  535|Drosophila melanogaster CG2368-PL,
           isoform L protein.
          Length = 535

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 567 YFQLVVPCGIHCVVYLVFR*AAAWLCPWHC*SPWATVTTH-HQVGP 701
           +  L +P  +   ++   R AA W CPW     W +  +H H + P
Sbjct: 464 FANLTIPISLSTRIWFACRTAACWACPW---DSWTSHPSHQHHLPP 506


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,339,377
Number of Sequences: 53049
Number of extensions: 568671
Number of successful extensions: 1305
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)