Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4109
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z74039-3|CAA98502.1|  410|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U40947-4|AAZ32798.1|  883|Caenorhabditis elegans Anion/bicarbona...    28   7.6  
U40947-3|AAZ32797.1|  956|Caenorhabditis elegans Anion/bicarbona...    28   7.6  
AY954522-1|AAX34430.1|  936|Caenorhabditis elegans anion transpo...    28   7.6  
AY887906-1|AAX34418.1|  956|Caenorhabditis elegans anion transpo...    28   7.6  

>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical
           protein ZK512.5 protein.
          Length = 1232

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -1

Query: 184 NR*SLHSKLTYRSSIESIKRVENYPNERFLKEIREIYYFGRYKGEKNPTNTLST 23
           N  S+ +   Y S  ES K  E    +   +E+R  Y  GR +G ++ TNTL++
Sbjct: 167 NASSMRNGFVYDSG-ESDKTSEELEEDEEEEEVRNFYMEGRAQGSRSVTNTLAS 219


>Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical
           protein C31A11.10 protein.
          Length = 273

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
 Frame = -3

Query: 497 LQKTHIKKN*IFFYYRIKLHLFYLIS-FFLRLHL------SCDYFRNFKYFAVFVVTSHI 339
           L++  +K +    YY+  +  FY +S FF RL+L      S ++ +N  ++ +++ +S  
Sbjct: 32  LKRIPVKSSMSLIYYKFGIDAFYTLSLFFARLYLIFTQTSSDNFIKNLSFYLIWISSSFG 91

Query: 338 SKKCEI 321
           S +  +
Sbjct: 92  SLRATV 97


>Z74039-3|CAA98502.1|  410|Caenorhabditis elegans Hypothetical
           protein K03B8.3 protein.
          Length = 410

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 456 IKKNSIFFNVRLLQYKFSHYKPEL-LGHEVSGLQSRSFYF 572
           I K +IF+NV  L  K+S + P   + H    L SR  +F
Sbjct: 29  IGKMNIFYNVTSLDNKYSFHNPSAPVPHSSHALSSRQAHF 68


>U40947-4|AAZ32798.1|  883|Caenorhabditis elegans Anion/bicarbonate
           transporter familyprotein 4, isoform b protein.
          Length = 883

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -1

Query: 448 LNYIYFT*SRFFCDYIYLVIISEILNTLRFLWSHHTSVKNAK--LNRVSNLTAREYR 284
           ++Y+       FC  I L+  SE++  +  L   H S++N K  +   +N T  E +
Sbjct: 551 IHYVTIYTEDIFCALISLIFFSEVVEFIH-LQEEHNSIENLKYYIENAANCTVTEVK 606


>U40947-3|AAZ32797.1|  956|Caenorhabditis elegans Anion/bicarbonate
           transporter familyprotein 4, isoform a protein.
          Length = 956

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -1

Query: 448 LNYIYFT*SRFFCDYIYLVIISEILNTLRFLWSHHTSVKNAK--LNRVSNLTAREYR 284
           ++Y+       FC  I L+  SE++  +  L   H S++N K  +   +N T  E +
Sbjct: 551 IHYVTIYTEDIFCALISLIFFSEVVEFIH-LQEEHNSIENLKYYIENAANCTVTEVK 606


>AY954522-1|AAX34430.1|  936|Caenorhabditis elegans anion
           transporter ABTS-4b protein.
          Length = 936

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -1

Query: 448 LNYIYFT*SRFFCDYIYLVIISEILNTLRFLWSHHTSVKNAK--LNRVSNLTAREYR 284
           ++Y+       FC  I L+  SE++  +  L   H S++N K  +   +N T  E +
Sbjct: 551 IHYVTIYTEDIFCALISLIFFSEVVEFIH-LQEEHNSIENLKYYIENAANCTVTEVK 606


>AY887906-1|AAX34418.1|  956|Caenorhabditis elegans anion
           transporter ABTS-4a protein.
          Length = 956

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -1

Query: 448 LNYIYFT*SRFFCDYIYLVIISEILNTLRFLWSHHTSVKNAK--LNRVSNLTAREYR 284
           ++Y+       FC  I L+  SE++  +  L   H S++N K  +   +N T  E +
Sbjct: 551 IHYVTIYTEDIFCALISLIFFSEVVEFIH-LQEEHNSIENLKYYIENAANCTVTEVK 606


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,129,643
Number of Sequences: 27780
Number of extensions: 313776
Number of successful extensions: 964
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)