Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4106
(375 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 116 5e-27
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 111 1e-25
01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887... 110 4e-25
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 109 7e-25
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 55 2e-08
02_05_0626 - 30456714-30456829,30456951-30457023,30457136-304572... 31 0.29
04_03_0444 - 16006619-16006733,16006754-16007048,16008265-16008967 30 0.68
10_06_0011 - 9581916-9582167,9582523-9582574,9584105-9584331 29 0.90
11_01_0028 - 215821-215880,216114-216284 29 1.2
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 29 1.6
06_03_0635 - 22971502-22973840,22974112-22974403,22974639-229751... 28 2.1
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 28 2.7
01_01_1006 - 7972645-7973811 28 2.7
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 27 3.6
06_03_0178 + 17594062-17595576 27 3.6
05_06_0202 - 26339467-26339494,26339579-26339624,26339742-263397... 27 3.6
04_04_1577 + 34554819-34554995,34555672-34555754,34555906-345562... 27 3.6
09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757 27 4.8
03_04_0088 + 17209568-17209876,17209966-17210595,17210846-172110... 27 4.8
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 27 6.3
07_03_0849 + 21997758-21998423 27 6.3
03_02_0987 - 12995754-12996347,12996440-12997684,12997772-129978... 27 6.3
12_01_0940 - 9303549-9303723,9303816-9303893,9304055-9304110,930... 26 8.4
11_02_0009 - 7315669-7315686,7316239-7316259,7316425-7316519,731... 26 8.4
06_03_1245 + 28652216-28652524,28652564-28652761,28652880-286529... 26 8.4
04_02_0002 + 8412568-8412781,8412915-8413015,8413114-8413185,841... 26 8.4
04_01_0382 - 5076673-5077774,5078122-5078186 26 8.4
01_06_1587 + 38468956-38469090,38470599-38470742,38470819-384708... 26 8.4
01_06_1037 + 33990358-33991263 26 8.4
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 116 bits (280), Expect = 5e-27
Identities = 58/121 (47%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +3
Query: 3 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFD 182
S++GF S D VTVG L V+ Q F EA EPGL F+ AKFDGILG+ F I+V PV+
Sbjct: 151 SIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWY 210
Query: 183 NMVAQGLV-QPVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHMDS 359
MV QGLV +PVFSF+ NR DP+HY+G+ VP+ + YW+F M
Sbjct: 211 KMVEQGLVSEPVFSFWFNRHSDEGEGGEIVFGGMDPSHYKGNHTYVPVSQKGYWQFEMGD 270
Query: 360 V 362
V
Sbjct: 271 V 271
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 111 bits (268), Expect = 1e-25
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Frame = +3
Query: 3 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFD 182
S++GF S D V VG L V+ Q F E EP L F+ KFDGILG+ F I+V P++
Sbjct: 142 SIAGFFSEDSVLVGDLAVKNQMFIETTREPSLTFIIGKFDGILGLGFPEISVGGAPPIWQ 201
Query: 183 NMVAQGLVQ-PVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHMDS 359
M Q L++ VFSF+LNRDP A T DP HY+G VP+ R YW+F M
Sbjct: 202 GMKEQQLIEKDVFSFWLNRDPDAPTGGELIFGGVDPNHYKGSHTYVPVTRKGYWQFEMGD 261
Query: 360 VNVN 371
+ ++
Sbjct: 262 LLID 265
>01_05_0795 +
25287449-25287967,25288078-25288138,25288640-25288734,
25288827-25288939,25289480-25289648,25289777-25289816,
25289906-25289970,25290150-25290263,25290398-25290462,
25290572-25290725,25290798-25290914,25292489-25292545
Length = 522
Score = 110 bits (264), Expect = 4e-25
Identities = 54/118 (45%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Frame = +3
Query: 3 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFD 182
S+ G+ S D VT+G L V Q F EA EPGL F+AAKFDGILG+ F I+V+ PV+
Sbjct: 205 SIHGYYSQDQVTIGDLVVNNQEFIEATHEPGLTFLAAKFDGILGLGFKEISVEGADPVWY 264
Query: 183 NMVAQGLV-QPVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHM 353
NM+ Q LV VFSF+LNR+ +D +HY+GD + R YW+F M
Sbjct: 265 NMIQQSLVTDKVFSFWLNRNANDINGGEIVFGGADESHYKGDHTYTRVTRKAYWQFEM 322
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 109 bits (262), Expect = 7e-25
Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Frame = +3
Query: 3 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFD 182
++SGF S D+V VG L V+ Q F EA E + F+ KFDGILG+ + I+V P++
Sbjct: 143 AISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQ 202
Query: 183 NMVAQGLV-QPVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHMDS 359
+M Q L+ VFSF+LNRDP A++ DP HY+GD VP+ R YW+F+M
Sbjct: 203 SMQEQELLADDVFSFWLNRDPDASSGGELVFGGMDPKHYKGDHTYVPVSRKGYWQFNMGD 262
Query: 360 VNVN 371
+ ++
Sbjct: 263 LLID 266
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 55.2 bits (127), Expect = 2e-08
Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 SLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFD 182
++SG+ S D V VG + V+ Q V L A F G L + S V +
Sbjct: 164 AISGYFSQDSVKVGDVAVKNQLRGSQVLHSWLQSSMA-FLG-LDLRKSRFPVTDIAKQTH 221
Query: 183 --NMVAQGLV-QPVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWE 344
NMV QGLV PVFSF+ NR DP HY+G+ VP+ R YW+
Sbjct: 222 RYNMVRQGLVVDPVFSFWFNRHADEGQGGEIVFGGIDPNHYKGNHTYVPVTRKGYWQ 278
>02_05_0626 -
30456714-30456829,30456951-30457023,30457136-30457250,
30457368-30457450,30457532-30457685,30457859-30458095,
30458212-30458435,30458657-30458774,30459286-30459614
Length = 482
Score = 31.1 bits (67), Expect = 0.29
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = +3
Query: 3 SLSGFLSTDDV----TVGGLKVRRQTFAEAVSEPGLAFVA-AKFDGILGMAFSTIAVDHV 167
S G L+ DD+ T GG + F A + G + AK DGILG++ + I++
Sbjct: 197 SSMGVLARDDMHIITTNGGREKLDFVFGCAYDQQGQLLASPAKTDGILGLSSAGISLP-- 254
Query: 168 TPVFDNMVAQGLVQPVFSFYLNRDP 242
+ QG++ VF + RDP
Sbjct: 255 ----SQLANQGIISNVFGHCITRDP 275
>04_03_0444 - 16006619-16006733,16006754-16007048,16008265-16008967
Length = 370
Score = 29.9 bits (64), Expect = 0.68
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 175 TGVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSS 26
T TWS+ + +P +P + + PGS RR++SP T TSS
Sbjct: 156 TTTTWSSTSDVAFLPPLPLQVVELRLLPGSRPVIDQ--RRSVSPTTSTSS 203
>10_06_0011 - 9581916-9582167,9582523-9582574,9584105-9584331
Length = 176
Score = 29.5 bits (63), Expect = 0.90
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 65 DVRRGRVGARACLRGRQVRRDPRDGLQH 148
D G A CL G+++ R+P GL+H
Sbjct: 109 DAEHGMHSANGCLAGQRLLREPHHGLRH 136
>11_01_0028 - 215821-215880,216114-216284
Length = 76
Score = 29.1 bits (62), Expect = 1.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 282 DPAHYRGDLVRVPLLRDTYWEFH 350
DP H++GD V + R YW+F+
Sbjct: 2 DPKHFKGDHTYVHVSRKGYWQFN 24
>06_03_1283 - 28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = -2
Query: 224 EREDGLHESLSHHVVEHRGHMVHCDSAEG-HPEDPVELGGHEGKPGLRHGLGERLAPHLE 48
E LH + H EH +HCD G H D HE + H E+ PH
Sbjct: 860 EEPVALHSTGEHACHEHEHEHIHCDEPIGSHCADKHACHDHE-QVHEHHCCDEQQTPHTA 918
Query: 47 PAH 39
H
Sbjct: 919 DLH 921
>06_03_0635 -
22971502-22973840,22974112-22974403,22974639-22975162,
22975314-22975583,22976393-22977124,22977226-22977310
Length = 1413
Score = 28.3 bits (60), Expect = 2.1
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 41 GRAQGAAPDVRRGRVGARACLRGRQVRRDPRDGLQHYRSGPC--DPGVRQHGGSGTRA 208
G QGA P VRR R G R RR +DG R+G P R+ GG RA
Sbjct: 71 GGQQGAEPAVRRVRGGVGGQQGARPQRRRRQDGAA-VRAGDARQRPWHRRQGGPQPRA 127
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 27.9 bits (59), Expect = 2.7
Identities = 27/80 (33%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = -2
Query: 242 GVPVEIEREDGLHESLSHHVVEHRGHMVHCDSAEGHPEDPVELG-GHEGKPGLRHGLGER 66
GV E E DG+ VV V D AE EDP E+G G E P G
Sbjct: 30 GVAAEKE-SDGMEVEDRGEVVSQEATAVKPDEAEEPEEDPEEVGEGAEEAPAAGPGDVAA 88
Query: 65 LAPHLEPAHGDIISGEEAGE 6
A P + GE A E
Sbjct: 89 AAAESGPVAMEAGDGEPALE 108
>01_01_1006 - 7972645-7973811
Length = 388
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 179 EHRGHMVHCDSAEGHPEDPVELGGHEGKPGLRHG 78
+H G ++ C S PE PV + G G+ HG
Sbjct: 84 DHHGRLLLCASQGPEPEPPVLDAFYRGPLGVHHG 117
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 184 LSNTGVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERK 14
+ V S LK +P + N +++ AS A++N + P+VTSSV +K
Sbjct: 131 MKKPAVKSSPISTLKKVPSLTEN-SSSSASSSFRRAASNATLNSPRSPSVTSSVTKK 186
>06_03_0178 + 17594062-17595576
Length = 504
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 124 PSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 2
PS + +P S +ASA+ + T TSS R+PE L
Sbjct: 18 PSTPRPSSPTPSSASASASASALAAAATTTTSSKRRRPEVL 58
>05_06_0202 -
26339467-26339494,26339579-26339624,26339742-26339785,
26340729-26340851,26341010-26341124,26341447-26342207,
26342305-26342711,26342798-26342900,26344642-26345144
Length = 709
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 38 RGRAQGAAPDVRRGRVGARACLRGRQVRRDPRDGLQHYRSGPCDP 172
R R +G AP V + R G+R RG + + RDG ++Y P +P
Sbjct: 210 RFRGRGGAP-VGKVRGGSRDNFRGNRSQTYYRDGAKNYIYVPKEP 253
>04_04_1577 +
34554819-34554995,34555672-34555754,34555906-34556229,
34556347-34556602,34556951-34557031,34557106-34557213,
34557300-34557329,34557475-34557612,34557737-34557774,
34557858-34557957,34558194-34558268
Length = 469
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 30 DVTVGGLKVRRQTFAEAVS-EPGLAFVAAKFDGILGMAFSTIAVDHVTPV 176
D +V GL++ + F + G A +G+LGM F + V VTP+
Sbjct: 129 DPSVLGLEIWGRKFTNPIGLAAGFDKNAEAVEGLLGMGFGFVEVGSVTPL 178
>09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757
Length = 817
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2
Query: 155 SGPCDPGVRQHGGSGTRAARL 217
SG DPGVR GG R ARL
Sbjct: 194 SGGFDPGVRLAGGGAYRPARL 214
>03_04_0088 +
17209568-17209876,17209966-17210595,17210846-17211019,
17211434-17211515,17212091-17212278,17212993-17213152,
17213441-17213763,17213860-17213967,17214116-17214189,
17214249-17214361,17214461-17214741
Length = 813
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 142 KAIPRIPSNLAATK-ASPGSDTASANVWRRTLSP 44
+AI +P L AT ASP DT + +W+ + P
Sbjct: 616 QAILSLPRQLDATSHASPSGDTTWSRIWKLCVPP 649
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 131 EDPVELGGHEGKPGLR-HGLGERLAPHLEPAHGDIISGEEAG 9
EDP+ +GG EG G++ G A + HG +I +G
Sbjct: 156 EDPLTIGGEEGDKGMKVKGEEGCRASGSDSGHGCVIGASGSG 197
>07_03_0849 + 21997758-21998423
Length = 221
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 181 SNTGVTWST--AIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERK 14
S++ V WS+ A+ L + S+ + T +P S + S + LSPP + ER+
Sbjct: 74 SSSSVPWSSTSALSLDSARSSSSSSSTTTTAPCSRSRSLSSLSDALSPPAARRAPERR 131
>03_02_0987 -
12995754-12996347,12996440-12997684,12997772-12997838,
12997982-12998073
Length = 665
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 80 RVG-ARACLRGRQVRRDPRDGLQHYRSGPCDPGVRQHGGSGTRAARLL 220
RVG A LRG R L H+R +PG++Q G T A++L
Sbjct: 611 RVGPANRLLRGLARRLG---SLFHFRGAAAEPGLQQLGAKATADAKVL 655
>12_01_0940 -
9303549-9303723,9303816-9303893,9304055-9304110,
9304687-9304760,9304888-9304892,9304934-9304971,
9308558-9308578,9308764-9308858,9309989-9310115
Length = 222
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 3 SLSGFLSTDDVTVGGLKVRRQTFA 74
S+ GF + D VTVG L V+ Q A
Sbjct: 54 SVDGFFNEDSVTVGDLVVKDQKIA 77
>11_02_0009 -
7315669-7315686,7316239-7316259,7316425-7316519,
7317445-7317502,7317701-7317792,7318101-7318227
Length = 136
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 3 SLSGFLSTDDVTVGGLKVRRQTFA 74
S+ GF + D VTVG L V+ Q A
Sbjct: 104 SVDGFFNEDSVTVGDLVVKDQKIA 127
>06_03_1245 +
28652216-28652524,28652564-28652761,28652880-28652981,
28653663-28653822,28654057-28654439
Length = 383
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 56 AAPDVRRGRVGARACLRGRQVRRDPR 133
AA R GRVG + G ++RRD R
Sbjct: 355 AAAMTRLGRVGVKTAATGGEIRRDCR 380
>04_02_0002 +
8412568-8412781,8412915-8413015,8413114-8413185,
8413267-8413380,8414248-8414269,8414450-8414598,
8415054-8415203,8415369-8415401,8418268-8418474
Length = 353
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 3 SLSGFLSTDDVTVGGLKVRRQTFA 74
S++GF + D VT+G L V+ Q A
Sbjct: 254 SVAGFFNEDSVTIGDLVVKDQEIA 277
>04_01_0382 - 5076673-5077774,5078122-5078186
Length = 388
Score = 26.2 bits (55), Expect = 8.4
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 9 SGFLSTDDVTVGGL-KVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVFDN 185
S + D V GL V Q F E ++ G+A A F +L ++ A++ FD
Sbjct: 117 SWHIMIDGYAVNGLGDVALQLFEEMKTKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDA 176
Query: 186 MVAQGLVQPVFSFYL 230
M ++P Y+
Sbjct: 177 MSRDHGIEPGVEHYV 191
>01_06_1587 +
38468956-38469090,38470599-38470742,38470819-38470845,
38470970-38471060,38471224-38471267,38471352-38471450,
38472233-38472331,38472545-38472646,38472758-38472823,
38472960-38473084,38473175-38473346,38473588-38473674
Length = 396
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 188 HVVEHRGHMVHCDSAEG 138
HV+E GH VH D+ +G
Sbjct: 360 HVLEDAGHWVHADNPDG 376
>01_06_1037 + 33990358-33991263
Length = 301
Score = 26.2 bits (55), Expect = 8.4
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 53 GAAPDVRRG--RVGARACLRGRQVRRDPR 133
GA V RG R RACL GRQ DPR
Sbjct: 188 GAYRGVFRGFMRSRTRACLVGRQAALDPR 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,252,081
Number of Sequences: 37544
Number of extensions: 202207
Number of successful extensions: 1002
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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