Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4106
         (375 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.29 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   0.51 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   2.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   4.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   6.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.3  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   8.3  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.0 bits (52), Expect = 0.29
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 170 GHMVHCDSAEGHPEDPV 120
           GHM H  +  GHP  P+
Sbjct: 120 GHMGHTPTPNGHPSTPI 136



 Score = 20.2 bits (40), Expect = 8.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 134 DGLQHYRSGPCDPGVRQHGGSGT 202
           DG+  YRS    PG+   G + T
Sbjct: 105 DGMGGYRSASPSPGMGHMGHTPT 127


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 0.51
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 130 RIPSNLAATKASPGSDTASANVWRRTLSPPTVTSS 26
           R  S   + KA PGS  A +   ++ LSP  + SS
Sbjct: 886 RPASQATSVKAEPGSIMAMSESSKKVLSPGELLSS 920


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 181 SNTGVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVE 20
           S+ G   + A  L +  R  S  +   AS  S TAS+    R+   P+V+ S E
Sbjct: 154 SSCGPGAAAAAALLSKRRSVSECSLGTASSTSSTASSRNSDRSAGSPSVSESDE 207


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 120 DGILGMAFSTIAVDHVTPVF 179
           +GI GM+ S IAV+    +F
Sbjct: 256 EGIFGMSLSPIAVNGYRTLF 275


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +3

Query: 12  GFLSTDD-VTVGGLKVRRQTFA 74
           GFLST+D V  G + ++ Q+ A
Sbjct: 164 GFLSTEDEVVPGNMGLKDQSMA 185


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +3

Query: 12  GFLSTDD-VTVGGLKVRRQTFA 74
           GFLST+D V  G + ++ Q+ A
Sbjct: 35  GFLSTEDEVVPGNMGLKDQSMA 56


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 157 TAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTS 29
           TA  LK    I + +   +ASP S  AS +   +  S  T+T+
Sbjct: 717 TAEQLKRTDIIHNYIMRGEASPRSPNASPSPAEQCASTTTITA 759


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +3

Query: 12  GFLSTDD-VTVGGLKVRRQTFA 74
           GFLST+D V  G + ++ Q+ A
Sbjct: 164 GFLSTEDEVVPGNMGLKDQSMA 185


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 156 VDHVTPVFDNMVAQGLVQPVF 218
           +D +  +  NMV + LVQ  F
Sbjct: 184 LDAILDIIRNMVPENLVQACF 204


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,026
Number of Sequences: 438
Number of extensions: 1496
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)