Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4100
(620 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A3DBM8 Cluster: Putative uncharacterized protein; n=2; ... 34 2.4
UniRef50_UPI0000E234AE Cluster: PREDICTED: similar to I3 binding... 33 4.2
UniRef50_A7FJN2 Cluster: Conserved domain protein; n=1; Yersinia... 33 4.2
UniRef50_UPI00006CB633 Cluster: hypothetical protein TTHERM_0044... 33 5.5
UniRef50_Q7VIW4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q54ED2 Cluster: 5'3'-exonuclease N-and I-domain-contain... 33 5.5
UniRef50_UPI0000E801FA Cluster: PREDICTED: hypothetical protein;... 33 7.3
UniRef50_Q0AWW2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_A7B212 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q9W3E7 Cluster: CG15351-PA; n=2; Sophophora|Rep: CG1535... 33 7.3
UniRef50_Q55E08 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
>UniRef50_A3DBM8 Cluster: Putative uncharacterized protein; n=2;
Clostridium|Rep: Putative uncharacterized protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 314
Score = 34.3 bits (75), Expect = 2.4
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 1 GAPAHHLNNGSLRSLPDKKNNRNGVV-CHPENFQRNLDTRYCRKQENGYIRNSETIIGFP 177
GA + L ++R L + +NN N +V C N Q+ +D + + YI+ P
Sbjct: 200 GAHSALLELENIRILKEMRNNVNRIVNCETANLQKTVDASVRQVENINYIKEHLGFDKLP 259
Query: 178 RNDREYERDHVEYSE 222
N RE + + YS+
Sbjct: 260 ENLREIAKMRLAYSD 274
>UniRef50_UPI0000E234AE Cluster: PREDICTED: similar to I3 binding
protein; n=1; Pan troglodytes|Rep: PREDICTED: similar to
I3 binding protein - Pan troglodytes
Length = 191
Score = 33.5 bits (73), Expect = 4.2
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -1
Query: 224 GSLYSTWSRSYSRSFRGNPIIVSELRMYPFSC 129
G L+ +W+R + + + GNP+ V +++Y + C
Sbjct: 135 GQLWGSWAREFQKMYPGNPLTVPCVQVYRYPC 166
>UniRef50_A7FJN2 Cluster: Conserved domain protein; n=1; Yersinia
pseudotuberculosis IP 31758|Rep: Conserved domain
protein - Yersinia pseudotuberculosis IP 31758
Length = 371
Score = 33.5 bits (73), Expect = 4.2
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 481 IVLTGHSTYTTPVTLMSLTALEHYVSTLLPLRIRKHNGMKNYC*DCKITNDCYRTRRAF 305
+V+T H T++T +TL SL + + R++ H G+ N I+N YR R F
Sbjct: 286 LVITVHDTWSTHITLQSLKITGDTYTATIKYRVQDHFGLDN----DDISNHIYRQLRIF 340
>UniRef50_UPI00006CB633 Cluster: hypothetical protein
TTHERM_00444600; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00444600 - Tetrahymena
thermophila SB210
Length = 694
Score = 33.1 bits (72), Expect = 5.5
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +1
Query: 22 NNGSLRSLPDKKNNRNGVVCHPENFQRNLDTRYCRKQENGYIRNSETIIGFPRNDREYER 201
NN SL S K+ N N + + + F +N Y +K N NS+ ++ Y R
Sbjct: 358 NNQSLYSYLRKRENDNNMDINYQQFDKNQIQGY-KKDFNIQRENSQLSYQLTEENKNYNR 416
Query: 202 DHVEYSEPEY--SIIPEAY-GREEY 267
D+ E E E + EA G+E+Y
Sbjct: 417 DYFEEEEQEEDDNFEEEALEGKEDY 441
>UniRef50_Q7VIW4 Cluster: Putative uncharacterized protein; n=1;
Helicobacter hepaticus|Rep: Putative uncharacterized
protein - Helicobacter hepaticus
Length = 287
Score = 33.1 bits (72), Expect = 5.5
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = +1
Query: 1 GAPAHHLNNGSLRSL-PDKKNNRNGV-VCHPENFQRNLDTRYCRKQENG----YIRNSET 162
G+ + +G L + P K++ R GV C+ +N + +T Y ++NG Y N +
Sbjct: 69 GSAKFYYPSGELECIVPYKRDKREGVRKCYYKNGKIKSETPYKNGEQNGVEKWYFENGKI 128
Query: 163 IIGFPRNDREYERDHVEYSEPEYSIIPEAYGREEYPRSCS 282
P + E E H YSE E+Y R++ CS
Sbjct: 129 ESERPYKNDEREGIHKWYSENGNIKNEESYKRDKLDGVCS 168
>UniRef50_Q54ED2 Cluster: 5'3'-exonuclease N-and I-domain-containing
protein; n=1; Dictyostelium discoideum AX4|Rep:
5'3'-exonuclease N-and I-domain-containing protein -
Dictyostelium discoideum AX4
Length = 1046
Score = 33.1 bits (72), Expect = 5.5
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 232 SIIPEAYGRE-EYPRSCSHSNTFNC*RRALFYNNHL*SCNPSNNSSF 369
S IP + G + + SCS++N FN + F NN++ + N + NS F
Sbjct: 746 STIPSSIGDDYDQMNSCSNNNNFNYNNSSNFNNNNINNSNNNRNSGF 792
>UniRef50_UPI0000E801FA Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 497
Score = 32.7 bits (71), Expect = 7.3
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 72 RRLSSRKLPTKPGHSLLQKTRERVHTQFRNDNRIPAERPGIRTRPR 209
+R + R+ P +P S Q HT R+ +RIP PG+R RPR
Sbjct: 203 QRGAPRRKPAEPRISSTQSCLRLFHTHPRS-HRIPGGSPGLRPRPR 247
>UniRef50_Q0AWW2 Cluster: Putative uncharacterized protein; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Putative uncharacterized protein - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 126
Score = 32.7 bits (71), Expect = 7.3
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -2
Query: 526 LQNTNKNSLNRIRYRIV--LTGHSTYTTPVTLMSLTALEHYVSTLLPLRIRKHNGMK 362
L N+ +NR+ RIV + G ST L+++ EHY+S+++PL + +G K
Sbjct: 57 LNQANQGIINRLNGRIVKVIEGEST-----ALLTIAMGEHYISSMMPLSRFRESGKK 108
>UniRef50_A7B212 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 521
Score = 32.7 bits (71), Expect = 7.3
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 88 ENFQRNLDTRYCRKQENGYIRNSETIIGFPRNDREYERDHVEYSEPEYSIIPEAYGREEY 267
EN Q NLD R+ +E G + N + P N + E+DH+E PE + + E
Sbjct: 93 ENIQANLDKRF---KETG-VENVYLPVLIPENLLQKEKDHIEGFAPEVAWVTHGGMEELQ 148
Query: 268 PRSC 279
R C
Sbjct: 149 ERFC 152
>UniRef50_Q9W3E7 Cluster: CG15351-PA; n=2; Sophophora|Rep:
CG15351-PA - Drosophila melanogaster (Fruit fly)
Length = 321
Score = 32.7 bits (71), Expect = 7.3
Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 94 FQRNLDTRYCRKQENGYIRNSETIIGFPRNDR-EYERDHVEYSEPEYSIIPEAYGREEYP 270
+++ D R ++ Y+ + +T P R Y + H ++ P+ + P+ + +YP
Sbjct: 172 YRQGFDNRAMAMKQQ-YLIHQQTQQSHPAQQRYNYAQQHAQHYAPQPQLQPQPQPQPQYP 230
Query: 271 RSCSHSNTF 297
+ H NT+
Sbjct: 231 QHTPHRNTY 239
>UniRef50_Q55E08 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 721
Score = 32.3 bits (70), Expect = 9.6
Identities = 15/69 (21%), Positives = 37/69 (53%)
Frame = +1
Query: 88 ENFQRNLDTRYCRKQENGYIRNSETIIGFPRNDREYERDHVEYSEPEYSIIPEAYGREEY 267
+ +Q+ + ++ +Q Y +N + + +ND++Y++ + + +YS + R++
Sbjct: 648 QQYQQQYEQQHQNQQYQQYQQNDQQ---YQQNDQQYQQQQQQQQQQQYSY----HNRDQS 700
Query: 268 PRSCSHSNT 294
P S SH N+
Sbjct: 701 PHSSSHHNS 709
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,694,408
Number of Sequences: 1657284
Number of extensions: 11456434
Number of successful extensions: 33141
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33114
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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