Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4100
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.3  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 239 MIEYSGSLYSTWSR 198
           M +  G LYSTWS+
Sbjct: 142 MFDTLGGLYSTWSK 155


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 239 MIEYSGSLYSTWSR 198
           M +  G LYSTWS+
Sbjct: 142 MFDTLGGLYSTWSK 155


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 457 YTTPVTLMSLTALEHYVS 404
           Y T  T+MS  A+EH +S
Sbjct: 313 YLTICTIMSAAAVEHILS 330


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = -1

Query: 206 WSRSYSRSFRGNPIIVSE 153
           W+ S+ ++++ NP + S+
Sbjct: 11  WTNSFYQNYKTNPFLASD 28


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = -1

Query: 206 WSRSYSRSFRGNPIIVSE 153
           W+ S+ ++++ NP + S+
Sbjct: 11  WTNSFYQNYKTNPFLASD 28


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 159 FGIAYVPVLLFSAVASVQVSLEVFWMTNDAVPVVL 55
           FG+    VL+F  + SVQ   ++F+  + A  V L
Sbjct: 194 FGVPIFLVLVFVQMQSVQDLSDIFYYKDTAQLVSL 228


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = -1

Query: 206 WSRSYSRSFRGNPIIVSE 153
           W+ S+ ++++ NP + S+
Sbjct: 11  WTNSFYQNYKTNPFLASD 28


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 80   VIQKTSNETWTLATAENKRTGTYA 151
            +      + WT+    N+R G YA
Sbjct: 1682 ICHNIKTQGWTVVQDPNRRMGPYA 1705


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -2

Query: 502 LNRIRYRIVLTGHSTYTTPVTLMSLTALEHYVSTLL 395
           LN+   +I +   +T T    L  +  L H++S L+
Sbjct: 198 LNKQLTKITVKNFATKTQSAVLGKICTLHHHLSKLV 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,481
Number of Sequences: 336
Number of extensions: 2871
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)