Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4088
(519 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 0.82
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 0.82
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 0.82
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 0.82
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 0.82
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 0.82
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 1.1
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 3.3
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 5.7
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 5.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.6
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 427 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 308
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 427 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 308
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 427 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 308
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 427 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 308
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 427 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 308
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 427 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 308
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.82
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 427 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 308
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 24.2 bits (50), Expect = 0.82
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 501 NWVPGPPSSFFFYW 460
+WV P SSF FYW
Sbjct: 78 HWVIHPCSSFRFYW 91
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -3
Query: 484 PLEFFFLLAHNVKTAITNFEMLHSIRINRYINSFKSIT 371
PL++ FL+ + + +F++LH+ R R + K ++
Sbjct: 178 PLDYIFLIFNQFQDFSESFQILHAGRALRILRLAKLLS 215
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 24.2 bits (50), Expect = 0.82
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 501 NWVPGPPSSFFFYW 460
+WV P SSF FYW
Sbjct: 78 HWVIHPCSSFRFYW 91
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -3
Query: 484 PLEFFFLLAHNVKTAITNFEMLHSIRINRYINSFKSIT 371
PL++ FL+ + + +F++LH+ R R + K ++
Sbjct: 178 PLDYIFLIFNQFQDFSESFQILHAGRALRILRLAKLLS 215
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 24.2 bits (50), Expect = 0.82
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 501 NWVPGPPSSFFFYW 460
+WV P SSF FYW
Sbjct: 78 HWVIHPCSSFRFYW 91
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -3
Query: 484 PLEFFFLLAHNVKTAITNFEMLHSIRINRYINSFKSIT 371
PL++ FL+ + + +F++LH+ R R + K ++
Sbjct: 178 PLDYIFLIFNQFQDFSESFQILHAGRALRILRLAKLLS 215
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 427 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 308
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIVSSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 196 CEDSKVYINKTTGYFLCPKCNLHGD 122
C VY +T G C C LH D
Sbjct: 527 CGQLDVYKVETIGDAYCVACGLHRD 551
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 205 EQNCEDSKVYINKTTGYFL 149
E C+D+ YI TG+ L
Sbjct: 190 EDKCKDTFAYIADVTGFAL 208
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 199 NCEDSKVYINKTTGYFL 149
NC+++ YI+ +GY L
Sbjct: 183 NCDNTYAYISDLSGYAL 199
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 139 CNLHGDWTILERIVKKAKVEVS 74
C +HGD + +K K+E++
Sbjct: 829 CEVHGDTPVTVTWLKGGKIELN 850
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 139 CNLHGDWTILERIVKKAKVEVS 74
C +HGD + +K K+E++
Sbjct: 825 CEVHGDTPVTVTWLKGGKIELN 846
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,291
Number of Sequences: 438
Number of extensions: 2790
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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