Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4086
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83110-5|CAB05527.1| 387|Caenorhabditis elegans Hypothetical pr... 35 0.026
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 31 0.55
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 30 0.73
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 30 0.73
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 30 0.73
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 30 0.73
Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81088-11|CAB03132.1| 339|Caenorhabditis elegans Hypothetical p... 28 3.9
Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical pr... 27 5.1
U80031-1|AAB37611.1| 392|Caenorhabditis elegans Downstream of d... 27 5.1
AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein. 27 5.1
AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein. 27 5.1
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 27 6.8
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 27 6.8
AC024831-12|AAW57824.1| 356|Caenorhabditis elegans Serpentine r... 27 6.8
AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine re... 27 6.8
U64601-2|AAQ82847.1| 592|Caenorhabditis elegans Temporarily ass... 27 9.0
U64601-1|AAB04573.2| 564|Caenorhabditis elegans Temporarily ass... 27 9.0
>Z83110-5|CAB05527.1| 387|Caenorhabditis elegans Hypothetical
protein F57C2.5 protein.
Length = 387
Score = 35.1 bits (77), Expect = 0.026
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Frame = +2
Query: 185 TKFSSIKLEPTKPRTGILESNGLLNNAEQLYKGKLLGPEAFQTFNGELDTSLTTGEI--- 355
T + +P G L N L AE + GK++GPE+ + + S+ ++
Sbjct: 29 TSARKYRFDPPPALVGNLFINAGLEKAEHILDGKIVGPESMVVDDEAIYVSVNDAKVLKI 88
Query: 356 --GKLTAGGHGTFVTQIGPPCSGLAYEHICGRP*GL 457
G++ + + ++ P C E CGRP G+
Sbjct: 89 VDGRVVSKASYSEKSKFFPDCGHFDTEPECGRPLGI 124
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 30.7 bits (66), Expect = 0.55
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Frame = +2
Query: 221 PRTGILESNGLLNNAEQLYKGKLLGPEA--FQTFNGELDTSLTTGEIGKLTAGG------ 376
P G+L N L +AE L ++ GPE+ N +L TG I ++
Sbjct: 87 PLEGVLAVNKRLTDAELLLVDQVYGPESLVLDEKNSKLYAGFKTGIIAEIDMKEGREKIV 146
Query: 377 HGTFVTQIGPPCSGLAYE--HICGRP*GL 457
H + Q C G +Y+ ++CGRP GL
Sbjct: 147 HAVQLAQGNHDCDG-SYKKMNLCGRPLGL 174
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 30.3 bits (65), Expect = 0.73
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 257 NNAEQLYKGKLLGPEAFQTFNGELDTSLTTGEIGKLTAGGHGTFVTQIGPPCSG 418
N A + +G+ + + T E D ++ GEI LT G HG V Q G +G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNG 56
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 30.3 bits (65), Expect = 0.73
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 257 NNAEQLYKGKLLGPEAFQTFNGELDTSLTTGEIGKLTAGGHGTFVTQIGPPCSG 418
N A + +G+ + + T E D ++ GEI LT G HG V Q G +G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNG 56
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 30.3 bits (65), Expect = 0.73
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 257 NNAEQLYKGKLLGPEAFQTFNGELDTSLTTGEIGKLTAGGHGTFVTQIGPPCSG 418
N A + +G+ + + T E D ++ GEI LT G HG V Q G +G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNG 56
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 30.3 bits (65), Expect = 0.73
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 257 NNAEQLYKGKLLGPEAFQTFNGELDTSLTTGEIGKLTAGGHGTFVTQIGPPCSG 418
N A + +G+ + + T E D ++ GEI LT G HG V Q G +G
Sbjct: 25 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNG 78
>Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical
protein ZK673.4 protein.
Length = 476
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 112 AAKVGIIHCSLCNSCGANPEHSSIY*ILKHQIRTH 216
A + G C +CN G + S Y +KH R H
Sbjct: 25 AIEEGRFRCKICNYIGKRGQQGSTYPQIKHMKRLH 59
>Z81088-11|CAB03132.1| 339|Caenorhabditis elegans Hypothetical
protein F53F1.11 protein.
Length = 339
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 95 TGLIKRLLKLALYIAVFAIAVVLIPNIPPY 184
TG++ ++ L ++AV+A+A + +P P Y
Sbjct: 172 TGVLTGVIDLTNFVAVYAVAHICLPFFPVY 201
>Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical
protein C32A3.1b protein.
Length = 468
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 263 AEQLYKGKLLGPEAFQTFNGELDTSLTTGEIGKLTAGGHGTFVTQIGPP 409
AEQ +LGP+ + TF ELD S + + +G + PP
Sbjct: 261 AEQYNVDTILGPDTYDTFLAELDFSSSESPTKQSPMEMNGDRMPSTAPP 309
>Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical
protein C32A3.1a protein.
Length = 490
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 263 AEQLYKGKLLGPEAFQTFNGELDTSLTTGEIGKLTAGGHGTFVTQIGPP 409
AEQ +LGP+ + TF ELD S + + +G + PP
Sbjct: 283 AEQYNVDTILGPDTYDTFLAELDFSSSESPTKQSPMEMNGDRMPSTAPP 331
>U80031-1|AAB37611.1| 392|Caenorhabditis elegans Downstream of
daf-16 (regulatedby daf-16) protein 20 protein.
Length = 392
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 180 GGMFGISTTAIAKTAMYNANFSSLFINPVISPIMYFRVETFLSQKHL 40
G +FG T+ +TA ++ LF++ IS MY+ + KHL
Sbjct: 347 GTLFGSPTSGPIQTATQSSGVVQLFVSMAIS-TMYWLSQLHFKMKHL 392
>AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein.
Length = 468
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 263 AEQLYKGKLLGPEAFQTFNGELDTSLTTGEIGKLTAGGHGTFVTQIGPP 409
AEQ +LGP+ + TF ELD S + + +G + PP
Sbjct: 261 AEQYNVDTILGPDTYDTFLAELDFSSSESPTKQSPMEMNGDRMPSTAPP 309
>AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein.
Length = 490
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 263 AEQLYKGKLLGPEAFQTFNGELDTSLTTGEIGKLTAGGHGTFVTQIGPP 409
AEQ +LGP+ + TF ELD S + + +G + PP
Sbjct: 283 AEQYNVDTILGPDTYDTFLAELDFSSSESPTKQSPMEMNGDRMPSTAPP 331
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -2
Query: 387 KVPCPPAVSFPISPVVKLVSNSPLKVWNASGPSNFPLYSCSALFRSPFDSN 235
KV S P+ PV+ + P+ + ++GPS P S FR P SN
Sbjct: 505 KVAMNRKTSNPVPPVLN--QSVPISI-TSNGPSRHPSSSSLTTFRKPSTSN 552
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -2
Query: 387 KVPCPPAVSFPISPVVKLVSNSPLKVWNASGPSNFPLYSCSALFRSPFDSN 235
KV S P+ PV+ + P+ + ++GPS P S FR P SN
Sbjct: 505 KVAMNRKTSNPVPPVLN--QSVPISI-TSNGPSRHPSSSSLTTFRKPSTSN 552
>AC024831-12|AAW57824.1| 356|Caenorhabditis elegans Serpentine
receptor, class t protein23 protein.
Length = 356
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 219 FVGSNLMLENLVYGGMFGISTTAIAKTAMYNANFSSLFINPVI 91
F+G + L + +F I + K ++N+N+ S F NP++
Sbjct: 154 FIGRKIFL-TIAVPILFTIYSIFFTKPVIFNSNYMSWFFNPML 195
>AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine
receptor, class t protein24 protein.
Length = 362
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 219 FVGSNLMLENLVYGGMFGISTTAIAKTAMYNANFSSLFINPVI 91
F+G L L ++ I KTA +N+N+ S F NP++
Sbjct: 159 FIGKKFYL-TLSVPIIYTIYAIFFTKTASFNSNYISWFFNPLL 200
>U64601-2|AAQ82847.1| 592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform b protein.
Length = 592
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 408 GGPIWVTKVPCPP-AVSFPISPVVKLVSNSPLKVWNASGPSNFPLYSCSALFRSPFDSNI 232
GG +W T + P +VS P S + S + VW AS ++ P ++ + SP +
Sbjct: 33 GGSLW-TSISTPEGSVSLPSSTTATITSTTVTPVWVAS-KNSIP-FADTLGSNSPLSEYL 89
Query: 231 PV 226
PV
Sbjct: 90 PV 91
>U64601-1|AAB04573.2| 564|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform a protein.
Length = 564
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 408 GGPIWVTKVPCPP-AVSFPISPVVKLVSNSPLKVWNASGPSNFPLYSCSALFRSPFDSNI 232
GG +W T + P +VS P S + S + VW AS ++ P ++ + SP +
Sbjct: 5 GGSLW-TSISTPEGSVSLPSSTTATITSTTVTPVWVAS-KNSIP-FADTLGSNSPLSEYL 61
Query: 231 PV 226
PV
Sbjct: 62 PV 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,887,614
Number of Sequences: 27780
Number of extensions: 258329
Number of successful extensions: 773
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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