Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4085
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 36 0.024
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.13
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 33 0.13
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 33 0.17
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 33 0.17
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 33 0.23
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.92
Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 30 1.6
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 29 2.8
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical... 29 3.7
AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical... 29 3.7
Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF016657-14|AAB93663.3| 495|Caenorhabditis elegans Hypothetical... 28 4.9
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical p... 28 6.5
AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical ... 28 6.5
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 27 8.6
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 27 8.6
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 27 8.6
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical p... 27 8.6
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p... 27 8.6
Z35719-2|CAA84799.2| 715|Caenorhabditis elegans Hypothetical pr... 27 8.6
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 27 8.6
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 27 8.6
U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo mitoc... 27 8.6
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 27 8.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 27 8.6
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 35.9 bits (79), Expect = 0.024
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +2
Query: 107 ASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSSS 286
+S T N T + S AS Q S TA PG + T +S + SSS
Sbjct: 901 SSSTQTNPNTGSTGSTVTQPSAFSSTSASSSTQPIASSTTANPGSSTSGPTIASTQGSSS 960
Query: 287 QPT---TGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVST 397
T TGS+T+ T + S+ + TT SSSV++
Sbjct: 961 TQTNSNTGSTTVATTVTQGSSTEGNTGSTTVNSQSSSVAS 1000
Score = 32.3 bits (70), Expect = 0.30
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = +2
Query: 101 ISASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTA-SSRRY 277
++ +S TT P + SS ++P + + ++ P PTA + + SS
Sbjct: 712 VNQGSSSVTTQPPASSRSTASQGSSSAQPIASSSTMGSTAGSSSPQPTASSTSVPSSTGA 771
Query: 278 SSSQPTTGSSTLGVTHLRRGSSA---SHGLRTTRTQHSSSVSTH 400
+SS T GSST+G T SS + +T T +S ST+
Sbjct: 772 TSSGSTVGSSTMGSTQSSLPSSTMTNTGSTGSTVTNQLASSSTY 815
Score = 31.5 bits (68), Expect = 0.53
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +2
Query: 101 ISASRTSATTNP---AFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSR 271
+ ++ S+TT+P + +Q+ + S S S +T P ++R+ +S+
Sbjct: 676 VQTTQVSSTTSPVASSSSQMTSTQQPSGSSSSIGSTVNQGSSSVTTQPPASSRS--TASQ 733
Query: 272 RYSSSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVST 397
SS+QP SST+G T GSS+ ++ + SS+ +T
Sbjct: 734 GSSSAQPIASSSTMGST---AGSSSPQPTASSTSVPSSTGAT 772
Score = 29.5 bits (63), Expect = 2.1
Identities = 30/109 (27%), Positives = 48/109 (44%)
Frame = +2
Query: 119 SATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSSSQPTT 298
S+T NP + + ++ ++Q + S + + P + T+ S SS+QP
Sbjct: 825 SSTANPG-SSTSGQTAVTTQGSSSTQTNSNTGSTGSTVTNPPVSSSTSGS---SSTQPIA 880
Query: 299 GSSTLGVTHLRRGSSASHGLRTTRTQHSSSVSTHHRLRAALATITQHSA 445
S+ GSS S G TQ SSS T+ + +T+TQ SA
Sbjct: 881 SSTA------NPGSSTS-GTTVVTTQGSSSTQTNPNTGSTGSTVTQPSA 922
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 224 TALPGPTARNFTASSRRY--SSSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVST 397
T G T N ASS Y SS++P S+ GSS S G TQ SSS T
Sbjct: 798 TGSTGSTVTNQLASSSTYGASSTEPIASSTA------NPGSSTS-GQTAVTTQGSSSTQT 850
Query: 398 HHRLRAALATIT 433
+ + +T+T
Sbjct: 851 NSNTGSTGSTVT 862
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 33.5 bits (73), Expect = 0.13
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKP-ASQPQQDHRSRLTALPGPTARNFTASSRRYS 280
+ S + +T T + S P AS S ++ G T SS ++
Sbjct: 104 TVSTIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVPGSSSTFA 163
Query: 281 SSQPTTGSSTLGVT-HLRRGSSASHGLRTTRTQHSSSVSTHHRLRAALATIT 433
SS P SS+ G T + GSS+++G T SSS + + +T+T
Sbjct: 164 SSTPIASSSSPGSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNSGSTGSTVT 215
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +3
Query: 270 VATVHRSPRPDHQRLGSHISGVAALHHMDYARHARNIQAQSRLTTDFEQHWRQSRSIQLS 449
+ T + P L SG++ L ++ AQS LTT + + S++ S
Sbjct: 468 LGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESS 527
Query: 450 FDSLQTSSSTGDTHAAFKLSLDSPQTSSSTG 542
TSS + T ++ SP SSS G
Sbjct: 528 TSGATTSSGSAGT------TMTSPSQSSSVG 552
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 33.5 bits (73), Expect = 0.13
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKP-ASQPQQDHRSRLTALPGPTARNFTASSRRYS 280
+ S + +T T + S P AS S ++ G T SS ++
Sbjct: 311 TVSTIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVPGSSSTFA 370
Query: 281 SSQPTTGSSTLGVT-HLRRGSSASHGLRTTRTQHSSSVSTHHRLRAALATIT 433
SS P SS+ G T + GSS+++G T SSS + + +T+T
Sbjct: 371 SSTPIASSSSPGSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNSGSTGSTVT 422
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +3
Query: 270 VATVHRSPRPDHQRLGSHISGVAALHHMDYARHARNIQAQSRLTTDFEQHWRQSRSIQLS 449
+ T + P L SG++ L ++ AQS LTT + + S++ S
Sbjct: 675 LGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESS 734
Query: 450 FDSLQTSSSTGDTHAAFKLSLDSPQTSSSTG 542
TSS + T ++ SP SSS G
Sbjct: 735 TSGATTSSGSAGT------TMTSPSQSSSVG 759
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 33.5 bits (73), Expect = 0.13
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKP-ASQPQQDHRSRLTALPGPTARNFTASSRRYS 280
+ S + +T T + S P AS S ++ G T SS ++
Sbjct: 311 TVSTIAGSTGSTITPVPGSSSTIGSSTPSASSSSSGTMSTISGSTGSTVTVVPGSSSTFA 370
Query: 281 SSQPTTGSSTLGVT-HLRRGSSASHGLRTTRTQHSSSVSTHHRLRAALATIT 433
SS P SS+ G T + GSS+++G T SSS + + +T+T
Sbjct: 371 SSTPIASSSSPGSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNSGSTGSTVT 422
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +2
Query: 116 TSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTAL---PGPTARNFTASSRRYSSS 286
TS TNP+ + + Q+ S ++ P + S T+ PG T + + S S+
Sbjct: 972 TSQNTNPSTSSGSSMSTQTPQSSQSTSPVESSTSGATSSSGSPGTTLTSISPSPSPSSTI 1031
Query: 287 QPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVS 394
+ GS++ V+ + +GS+ + G + S+VS
Sbjct: 1032 GSSQGSTSPVVSTISQGSTETPGSTGSTVTKPSTVS 1067
Score = 28.7 bits (61), Expect = 3.7
Identities = 34/112 (30%), Positives = 49/112 (43%)
Frame = +2
Query: 107 ASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSSS 286
A TS NP+ + + QS + ++ P + S T PG T++S S S
Sbjct: 848 APSTSQNPNPSTSSGSSMITQSPYPSQSTSPVE---SSTTPSPGSPGTTLTSTSP--SPS 902
Query: 287 QPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVSTHHRLRAALATITQHS 442
Q TT ST G S S G+ TT + +S ST + +T+TQ S
Sbjct: 903 QSTTIGSTQG--------STSPGISTTSEEMTSQGST-QTPGSTGSTVTQPS 945
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +3
Query: 270 VATVHRSPRPDHQRLGSHISGVAALHHMDYARHARNIQAQSRLTTDFEQHWRQSRSIQLS 449
+ T + P L SG++ L ++ AQS LTT + + S++ S
Sbjct: 675 LGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESS 734
Query: 450 FDSLQTSSSTGDTHAAFKLSLDSPQTSSSTG 542
TSS + T ++ SP SSS G
Sbjct: 735 TSGATTSSGSAGT------TMTSPSQSSSVG 759
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS 283
S +T+ +PA ++ S H +PA + + T G + TASS ++
Sbjct: 59 SGLKTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAA 118
Query: 284 SQPTTGS--STLGVTHLRRGSSASHGLRTTRTQHSS 385
S + + S+ G +H GSS+SH T ++ SS
Sbjct: 119 SSGGSSARYSSSGRSHPTSGSSSSHARSTGQSGMSS 154
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS 283
S +T+ +PA ++ S H +PA + + T G + TASS ++
Sbjct: 59 SGLKTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAA 118
Query: 284 SQPTTGS--STLGVTHLRRGSSASHGLRTTRTQHSS 385
S + + S+ G +H GSS+SH T ++ SS
Sbjct: 119 SSGGSSARYSSSGRSHPTSGSSSSHARSTGQSGMSS 154
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 246 HATSLPHHVATVHRSPRPDHQRLGSHISGVAALHHMDYARHAR 374
H +PHH +H + P H G S L H YA H +
Sbjct: 771 HHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQ 813
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS 283
S +T+ +PA ++ S H +PA + T G + TASS ++
Sbjct: 59 SGLKTANLKHPARPSTESSTSSSHHQRPAQEMNGTSTPTATGGGGTSGATTTASSGAPAA 118
Query: 284 SQPTTGS--STLGVTHLRRGSSASHGLRTTRTQHSS 385
S + + S+ G +H GSS+SH T ++ SS
Sbjct: 119 SSGGSSARYSSSGRSHPTSGSSSSHARSTGQSGMSS 154
Score = 27.9 bits (59), Expect = 6.5
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +2
Query: 116 TSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS---S 286
T ++T+ + Q A+ + + A+ + TA G A + SS RYSS S
Sbjct: 74 TESSTSSSHHQRPAQEMNGTSTPTATGGGGTSGATTTASSGAPAASSGGSSARYSSSGRS 133
Query: 287 QPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSV 391
PT+GSS+ +H R + R+ ++ V
Sbjct: 134 HPTSGSSS---SHARSTGQSGMSSRSAARRNDQDV 165
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.7 bits (66), Expect = 0.92
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS 283
S+S ++ T P T+ S+ + P+S + T+ GP++ + T SS SS
Sbjct: 465 SSSSSTTVTTPTSTE-------STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-SS 516
Query: 284 SQPTTGSSTLGVTHLRRGSSASHGLRTT 367
S +T SST T ++ S+ + TT
Sbjct: 517 SVSSTASSTQSSTSTQQSSTTTKSETTT 544
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.7 bits (66), Expect = 0.92
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS 283
S+S ++ T P T+ S+ + P+S + T+ GP++ + T SS SS
Sbjct: 465 SSSSSTTVTTPTSTE-------STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-SS 516
Query: 284 SQPTTGSSTLGVTHLRRGSSASHGLRTT 367
S +T SST T ++ S+ + TT
Sbjct: 517 SVSSTASSTQSSTSTQQSSTTTKSETTT 544
>Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical
protein C37E2.4 protein.
Length = 257
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 282 HRSPRPDHQRLGSHISGVAALHHMDYARHARNIQAQSRLTTDFEQHWRQSRS 437
H +PD + LG HI G + A++ N S+L +Q +Q +S
Sbjct: 137 HNESKPDTKSLGIHIPGTPEFNAHSAAKYEANSAVLSQLQQQQQQQLQQPKS 188
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/98 (27%), Positives = 42/98 (42%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS 283
+ S S TNP+ + S S S P + ++ GPT SS ++
Sbjct: 1552 TGSTGSTVTNPSTSSST-----SGSSSTQSIPSSTAANTGSSTSGPTVATTQGSSSTQTN 1606
Query: 284 SQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVST 397
S TGS+T+ T + S+ + TT SSSV++
Sbjct: 1607 SN--TGSTTVATTVTQGSSTGGNSGSTTVNFQSSSVAS 1642
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 221 LTALPGPTARNFTASSRRYSSSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVST 397
LT+ P+ + SS+ S + T + T G GSS+S + TT T + VST
Sbjct: 393 LTSTIAPSTQGVPTSSKSSSPNSTPTTTITPGAPSSTLGSSSSTIVSTTITPSTPKVST 451
Score = 27.9 bits (59), Expect = 6.5
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Frame = +2
Query: 116 TSATTNPAFTQIKARH*QSSHS-KPASQPQQDHRSRLTALPGPTARNFTASSRR---YSS 283
T+ T P+ + I + Q S S +P + + ++ P PT + + S S
Sbjct: 1468 TTVTVPPSSSSIGSTAPQGSSSIQPIASSSTMGSTAGSSSPQPTVSSTSVPSSTGATSSG 1527
Query: 284 SQPTTGSSTLGVTHLRRGSS-----ASHGLRTTRTQHSSSVS 394
S T GSST+G T SS S G T SSS S
Sbjct: 1528 SSTTVGSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTS 1569
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 170 SSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSSSQPTTGS 304
S+ P++ +S +TA P T TAS +SS PT+ S
Sbjct: 495 SNQPTPSTSNPTTPKSTVTASPSTTGATSTASPSTITSSAPTSQS 539
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +2
Query: 119 SATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSSSQPTT 298
S+++NP + K + S S+ S+ + RSR P + R+ + S SSS+ +
Sbjct: 210 SSSSNPKKDEHKRNRNRRSRSRTRSRERTSRRSRSKESP-RSKRSRRSRSSSNSSSESDS 268
Query: 299 GSSTLGVTHLRRGSSASHGLRTTRTQHSSS 388
SS R S RT++ + S+S
Sbjct: 269 SSSRSSSYSSRSRSRTPQRSRTSKRRRSNS 298
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +2
Query: 119 SATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSSSQPTT 298
S+++NP + K + S S+ S+ + RSR P + R+ + S SSS+ +
Sbjct: 210 SSSSNPKKDEHKRNRNRRSRSRTRSRERTSRRSRSKESP-RSKRSRRSRSSSNSSSESDS 268
Query: 299 GSSTLGVTHLRRGSSASHGLRTTRTQHSSS 388
SS R S RT++ + S+S
Sbjct: 269 SSSRSSSYSSRSRSRTPQRSRTSKRRRSNS 298
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical
protein F36G3.1 protein.
Length = 964
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 394 DSPQTSSSTGDNHAAFSSVSTH 459
D +TSS+T DN+ FS STH
Sbjct: 484 DEVETSSTTADNNIPFSDCSTH 505
>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
protein R07E4.1a protein.
Length = 1122
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 222 SPRFLVLRHATSLPHHVATVHRSPRPDHQRL 314
SP +V+ H T +P+ + TVHR+ P H L
Sbjct: 60 SPPSIVVAHLTKVPNAIGTVHRA-APTHSGL 89
>AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical
protein Y47D3A.17c protein.
Length = 842
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 94 IHHQCIKNFGYHKPRIHADKSTSLTVVPQQASIAASTGPSQPTHRASWS 240
+ H C + + R+H DK+TS V+ Q S P R W+
Sbjct: 175 VGHTCRGSINLQEARVHTDKTTSCIVISGQ-SQTFHVKPQNEMDRQQWT 222
>AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical
protein Y47D3A.17a protein.
Length = 766
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 94 IHHQCIKNFGYHKPRIHADKSTSLTVVPQQASIAASTGPSQPTHRASWS 240
+ H C + + R+H DK+TS V+ Q S P R W+
Sbjct: 99 VGHTCRGSINLQEARVHTDKTTSCIVISGQ-SQTFHVKPQNEMDRQQWT 146
>Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical
protein E02H4.2 protein.
Length = 560
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 325 SPAWQLCITWTTHDTHATFKLSLDSPQTSSSTGDNHAAFSSVSTHCKLR 471
+P+ + T + + + + SL PQT + GD + ++S T+C+ R
Sbjct: 324 APSLSIQSTDSFNSAYEDAEESLIQPQTKKNEGDAYGKYNSTLTNCQTR 372
>AF016657-14|AAB93663.3| 495|Caenorhabditis elegans Hypothetical
protein C16C4.13 protein.
Length = 495
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 115 NFGYHKPRIHADKSTSLTVVPQQASIAASTGPSQPTHRASW 237
+FG+H P + D+ T VV ++A + A+ G + W
Sbjct: 188 SFGFHLPHVSEDR-TKTGVVEREAKLIAANGKFHSVPKRRW 227
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 167 QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSSSQPTTGSS-----TLGVTHLR 331
QS + PA + +R+ P +R+ S+ S + P++ SS T G T R
Sbjct: 37 QSDDTPPAVARRGRNRAAARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRGTTSAR 96
Query: 332 RGSSASHGLRTT--RTQHSSSVS 394
RG ++ G T RT+ + +S
Sbjct: 97 RGRGSARGGEATMNRTRANQQIS 119
>Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical
protein R07B1.8 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 103 QCIKNFGYHKPRIHADKSTSLTVVPQQASIAASTGPSQPT 222
QC+K+ H P + + S+SL P A I P+Q T
Sbjct: 283 QCVKSKSPHIPAMVIEMSSSLDEEPTSAKIQEQVTPAQLT 322
>AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical
protein F56A11.7 protein.
Length = 126
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 142 HADKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLHCLITSL 276
+A+ +LT V Q +++ G ++ HR WS GTQLH T L
Sbjct: 48 NANYFLTLTCVLQDLYLSSCHG-NEYGHRDLWSVGTQLHQSTTLL 91
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/102 (23%), Positives = 36/102 (35%)
Frame = +2
Query: 101 ISASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYS 280
+S+ R SA P Q + SH K Q H P P + SS Y+
Sbjct: 504 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 560
Query: 281 SSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVSTHHR 406
+S T+G + HL + R H +S + +
Sbjct: 561 ASS-TSGYDDDDIYHLSAREARERLRMKNRKHHLHEMSLNEK 601
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/102 (23%), Positives = 36/102 (35%)
Frame = +2
Query: 101 ISASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYS 280
+S+ R SA P Q + SH K Q H P P + SS Y+
Sbjct: 363 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 419
Query: 281 SSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVSTHHR 406
+S T+G + HL + R H +S + +
Sbjct: 420 ASS-TSGYDDDDIYHLSAREARERLRMKNRKHHLHEMSLNEK 460
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/102 (23%), Positives = 36/102 (35%)
Frame = +2
Query: 101 ISASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYS 280
+S+ R SA P Q + SH K Q H P P + SS Y+
Sbjct: 227 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 283
Query: 281 SSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVSTHHR 406
+S T+G + HL + R H +S + +
Sbjct: 284 ASS-TSGYDDDDIYHLSAREARERLRMKNRKHHLHEMSLNEK 324
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/102 (23%), Positives = 36/102 (35%)
Frame = +2
Query: 101 ISASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYS 280
+S+ R SA P Q + SH K Q H P P + SS Y+
Sbjct: 504 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 560
Query: 281 SSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVSTHHR 406
+S T+G + HL + R H +S + +
Sbjct: 561 ASS-TSGYDDDDIYHLSAREARERLRMKNRKHHLHEMSLNEK 601
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/102 (23%), Positives = 36/102 (35%)
Frame = +2
Query: 101 ISASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYS 280
+S+ R SA P Q + SH K Q H P P + SS Y+
Sbjct: 363 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 419
Query: 281 SSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSSVSTHHR 406
+S T+G + HL + R H +S + +
Sbjct: 420 ASS-TSGYDDDDIYHLSAREARERLRMKNRKHHLHEMSLNEK 460
>Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical
protein R06F6.8a protein.
Length = 1468
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 233 PGPTARNFTASSRRYSSSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSS 388
P P+A+ T+ SRR + S P+ SST V + R + + G R + +HS S
Sbjct: 977 PPPSAK--TSLSRRPTVSSPSADSSTEFV--INRFQAGAAGGRLNKVRHSQS 1024
>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
protein R06F6.8b protein.
Length = 1470
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 233 PGPTARNFTASSRRYSSSQPTTGSSTLGVTHLRRGSSASHGLRTTRTQHSSS 388
P P+A+ T+ SRR + S P+ SST V + R + + G R + +HS S
Sbjct: 979 PPPSAK--TSLSRRPTVSSPSADSSTEFV--INRFQAGAAGGRLNKVRHSQS 1026
>Z35719-2|CAA84799.2| 715|Caenorhabditis elegans Hypothetical
protein F17C8.3 protein.
Length = 715
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 357 YARHARNIQAQSRLTTDFEQHWRQSRSIQLS 449
YA H QA+ +T+D E+ W+Q+ ++ +S
Sbjct: 347 YAYHLYATQAEEHVTSDDEEIWKQNYNLIVS 377
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS 283
S S TS + +P S S P+ P S + PT+ ++ +S YS
Sbjct: 1639 SYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSP 1698
Query: 284 SQPT 295
+ PT
Sbjct: 1699 TSPT 1702
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 267 HVATVHRSPRPDHQRLGSHIS 329
HV T SP+P H+R SH S
Sbjct: 1594 HVRTAANSPQPRHRRSDSHFS 1614
>U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo
mitochondrial fusion protein)related protein 1 protein.
Length = 774
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +3
Query: 330 GVAALHHMDYARHARNIQAQSRLTTDFEQHWRQSR----SIQLSFDSLQTSSS 476
G AL ++ RH + ++S + T FE H R++ ++L+ +S+ TS++
Sbjct: 342 GTRALEFQNFERHFEHCISRSAIHTKFEAHNRRAHEMIGKMRLNLNSVLTSAA 394
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +2
Query: 104 SASRTSATTNPAFTQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRYSS 283
S S TS + +P S S P+ P S + PT+ ++ +S YS
Sbjct: 1646 SYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSP 1705
Query: 284 SQPT 295
+ PT
Sbjct: 1706 TSPT 1709
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 264 HHVATVHRSPRPDH-QRLGSHISGVAALHHMDYARH 368
HH A H +P +H + G H G +HH + H
Sbjct: 626 HHGAHHHHAPHHEHHEHHGDHHHGSHGVHHGHHGTH 661
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 360 ARHARNIQAQSRLT-TDFEQHWRQSRS-IQLSFDSLQ----TSSSTGDTHAAFKLSLDS 518
A RN+ Q +T + E W + ++ + L +SL+ + + GD+ AF+ +DS
Sbjct: 65 AEELRNVAEQEAVTMAEKEDQWEEQKTALNLEIESLRDRITSKADVGDSTEAFRAQIDS 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,836,958
Number of Sequences: 27780
Number of extensions: 318129
Number of successful extensions: 1250
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -