Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4082
(406 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 82 2e-16
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 52 2e-07
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 52 2e-07
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 51 3e-07
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 51 3e-07
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 42 2e-04
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 42 2e-04
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 38 0.004
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 35 0.026
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical... 31 0.24
Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 6.8
AC006614-1|AAF39762.2| 472|Caenorhabditis elegans Hypothetical ... 27 6.8
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 81.8 bits (193), Expect = 2e-16
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Frame = +1
Query: 49 PRRWDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTT 228
P +D V+E+EA+L+ +G LD LT LG +LA++PIEP + K+++LG LG G +
Sbjct: 832 PPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCD 891
Query: 229 MAANSTTFPEIFVLEGRR--RLSMHQRALGGDRASDHVAMLNAFQ 357
+ A++ +FP FV + RLS QR G++ SDHVA+++ Q
Sbjct: 892 V-ASAMSFPTPFVPREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQ 935
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +1
Query: 61 DAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTTMAAN 240
D++I A L L LD + LT LG +A+ P+EP L K++++ LG + + T+ A
Sbjct: 927 DSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAM 986
Query: 241 STTFPEIFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREH 375
+ + ++ + ++A DH+ +L + W+ H
Sbjct: 987 LNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHH 1031
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +1
Query: 61 DAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTTMAAN 240
D++I A L L LD + LT LG +A+ P+EP L K++++ LG + + T+ A
Sbjct: 927 DSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAM 986
Query: 241 STTFPEIFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREH 375
+ + ++ + ++A DH+ +L + W+ H
Sbjct: 987 LNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHH 1031
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 51.2 bits (117), Expect = 3e-07
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +1
Query: 61 DAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTTMAAN 240
D ++ + L LG LD LTP+G + + P++P L KM+++ +G D + T+ +
Sbjct: 828 DNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSM 887
Query: 241 STTFPEIFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREH 375
+ F +GR + ++ SDH+ LN + W R H
Sbjct: 888 LSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQW-RTH 931
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 51.2 bits (117), Expect = 3e-07
Identities = 29/105 (27%), Positives = 51/105 (48%)
Frame = +1
Query: 61 DAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTTMAAN 240
D ++ + L LG LD LTP+G + + P++P L KM+++ +G D + T+ +
Sbjct: 828 DNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSM 887
Query: 241 STTFPEIFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREH 375
+ F +GR + ++ SDH+ LN + W R H
Sbjct: 888 LSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQW-RTH 931
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 44.4 bits (100), Expect = 3e-05
Identities = 24/104 (23%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +1
Query: 61 DAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTTMAAN 240
+ ++ A LL L ++ + LT LG+++A+ P++P+L KM++ L + + ++ A
Sbjct: 478 ETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITA- 536
Query: 241 STTFPEIFVLEGRRRLSMHQ-RALGGDRASDHVAMLNAFQMWER 369
+ P+ +V R + +A DH+ +LN + +++
Sbjct: 537 MLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQ 580
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 44.4 bits (100), Expect = 3e-05
Identities = 24/104 (23%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +1
Query: 61 DAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTTMAAN 240
+ ++ A LL L ++ + LT LG+++A+ P++P+L KM++ L + + ++ A
Sbjct: 478 ETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITA- 536
Query: 241 STTFPEIFVLEGRRRLSMHQ-RALGGDRASDHVAMLNAFQMWER 369
+ P+ +V R + +A DH+ +LN + +++
Sbjct: 537 MLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQ 580
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical protein
C04H5.6 protein.
Length = 1008
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 49 PRRWDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTT 228
P + ++ A L LG L+ LT LG +A+ P +P + KM++ + + T
Sbjct: 749 PPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVT 808
Query: 229 MAANSTTFPEIFVLEGRRRLSMHQRALG-GDRASDHVAMLNAFQMWE 366
+AA + +F + + G A DH+ ++N + W+
Sbjct: 809 IAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQ 855
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 49 PRRWDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTT 228
P + ++ A L LG L+ LT LG +A+ P +P + KM++ + + T
Sbjct: 749 PPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVT 808
Query: 229 MAANSTTFPEIFVLEGRRRLSMHQRALG-GDRASDHVAMLNAFQMWE 366
+AA + +F + + G A DH+ ++N + W+
Sbjct: 809 IAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQ 855
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 49 PRRWDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTT 228
P + ++ A L LG L+ LT LG +A+ P +P + KM++ + + T
Sbjct: 749 PPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVT 808
Query: 229 MAANSTTFPEIFVLEGRRRLSMHQRALG-GDRASDHVAMLNAFQMWE 366
+AA + +F + + G A DH+ ++N + W+
Sbjct: 809 IAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQ 855
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 124 LTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALTTMAANSTTFPEIFVLEGRRRLS-MHQ 300
LT LG +++KLP+E + KM+V G V+ + + T+AA + F R L + +
Sbjct: 510 LTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAA-GLSVQSPFTNRSYRELEIVER 568
Query: 301 RALGGDRASDHVAMLNAFQMW 363
RA D +++ F+ W
Sbjct: 569 RASLTSPLGDPFTLISIFREW 589
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 34.7 bits (76), Expect = 0.026
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 124 LTPLGTILAKLPIEPRLGKMMVLGFVLG-VGDALTTMAANSTTFPEIFVLEGRRRLSMHQ 300
LT LG ++A+LP++P+L +M++ G L + + +A ++ P + L R L
Sbjct: 873 LTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDLQSKM 932
Query: 301 R-ALGGDRASDHV 336
+ + SDH+
Sbjct: 933 KFEMAQQDLSDHL 945
>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
protein Y110A7A.9a protein.
Length = 1019
Score = 31.5 bits (68), Expect = 0.24
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -3
Query: 371 SLSHIWKAFNMATWSEARSPPRALWCIDSRRRPSSTNISGNVVELAAIVVRASPTPSTKP 192
S+ H A N+ WS ARSP L + +S++ISG+++ ++ V A + P
Sbjct: 47 SIEHHQSAINIIRWSPARSPFADLSPSSLQPIIASSDISGHII-ISNSVTAAQINKFSHP 105
Query: 191 NTIIL 177
N+ +L
Sbjct: 106 NSSVL 110
>Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical
protein R13.4 protein.
Length = 803
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 396 WASSPFVVFSLPHLESIQHGHVV-GGPVSAQGSLVHRQSPPAFEH 265
+ S P + PH++ +Q+GH++ PVS G + + Q H
Sbjct: 270 YPSGPSQMAGHPHMQQMQYGHMMRAPPVSVYGQMNNAQQYAVTAH 314
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 263 NISGNVVELAAIVVRASPTPSTKPNTIILPRR 168
N+ +++L + ++ SPTPS P + PR+
Sbjct: 1356 NLLEKLLQLGPLKIKKSPTPSKTPKSSEAPRK 1387
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 263 NISGNVVELAAIVVRASPTPSTKPNTIILPRR 168
N+ +++L + ++ SPTPS P + PR+
Sbjct: 1356 NLLEKLLQLGPLKIKKSPTPSKTPKSSEAPRK 1387
>AC006614-1|AAF39762.2| 472|Caenorhabditis elegans Hypothetical
protein C34H3.1 protein.
Length = 472
Score = 26.6 bits (56), Expect = 6.8
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 340 MLNAFQMWEREHNKGRRGPAT 402
MLN F+M++ +H++G P T
Sbjct: 310 MLNCFKMYKSKHDRGNASPYT 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,299,580
Number of Sequences: 27780
Number of extensions: 153331
Number of successful extensions: 490
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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