Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4080
(567 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB033040-1|BAA86528.1| 462|Homo sapiens KIAA1214 protein protein. 33 0.93
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 31 2.8
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 31 2.8
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 31 2.8
AK097411-1|BAC05040.1| 656|Homo sapiens protein ( Homo sapiens ... 31 3.7
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 30 4.9
AK126559-1|BAC86594.1| 308|Homo sapiens protein ( Homo sapiens ... 30 6.5
BC023531-1|AAH23531.1| 775|Homo sapiens chondroitin polymerizin... 29 8.6
BC021223-1|AAH21223.2| 775|Homo sapiens chondroitin polymerizin... 29 8.6
BC008878-1|AAH08878.2| 368|Homo sapiens CHPF protein protein. 29 8.6
AY358403-1|AAQ88769.1| 775|Homo sapiens RASL651 protein. 29 8.6
AB095813-1|BAC78393.1| 775|Homo sapiens chondroitin polymerizin... 29 8.6
AB086063-1|BAC81536.1| 775|Homo sapiens chondroitin sulfate syn... 29 8.6
>AB033040-1|BAA86528.1| 462|Homo sapiens KIAA1214 protein protein.
Length = 462
Score = 32.7 bits (71), Expect = 0.93
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = -1
Query: 210 EGPAVSAEDVGGLAGGKGQRPSVVAQGRD------QRCGVCKRCGVGDGRHESAIYGR 55
+GPA SA G GG RP + G + QR GV + G G GR E A GR
Sbjct: 3 KGPAPSARPESGPRGGCASRPRPLRPGSEQQQEERQRPGVGRGWGGGTGRREGAGAGR 60
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 31.1 bits (67), Expect = 2.8
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +1
Query: 85 IAYTAPLAYTAPLIAPLGNYRGPLS----LAPGQPANVLGADGRPLDTLEVNLDRAAHYT 252
I +APL +A A L + PL+ APG P+ L + L A +
Sbjct: 1457 IPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLS 1516
Query: 253 SKALGVH--LLKKRSAVIAPI-STVAVAHSPLITPAAHIAYSAPLA 381
S H LL S+ + + STVA A SP++ PA+ +A P A
Sbjct: 1517 SSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA 1562
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 31.1 bits (67), Expect = 2.8
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +1
Query: 85 IAYTAPLAYTAPLIAPLGNYRGPLS----LAPGQPANVLGADGRPLDTLEVNLDRAAHYT 252
I +APL +A A L + PL+ APG P+ L + L A +
Sbjct: 106 IPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLS 165
Query: 253 SKALGVH--LLKKRSAVIAPI-STVAVAHSPLITPAAHIAYSAPLA 381
S H LL S+ + + STVA A SP++ PA+ +A P A
Sbjct: 166 SSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA 211
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 31.1 bits (67), Expect = 2.8
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +1
Query: 85 IAYTAPLAYTAPLIAPLGNYRGPLS----LAPGQPANVLGADGRPLDTLEVNLDRAAHYT 252
I +APL +A A L + PL+ APG P+ L + L A +
Sbjct: 1280 IPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLS 1339
Query: 253 SKALGVH--LLKKRSAVIAPI-STVAVAHSPLITPAAHIAYSAPLA 381
S H LL S+ + + STVA A SP++ PA+ +A P A
Sbjct: 1340 SSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA 1385
>AK097411-1|BAC05040.1| 656|Homo sapiens protein ( Homo sapiens
cDNA FLJ40092 fis, clone TESTI2003756. ).
Length = 656
Score = 30.7 bits (66), Expect = 3.7
Identities = 24/95 (25%), Positives = 39/95 (41%)
Frame = +1
Query: 70 GLVAPIAYTAPLAYTAPLIAPLGNYRGPLSLAPGQPANVLGADGRPLDTLEVNLDRAAHY 249
GLVAP+A A + TAP+ GPL + P + R D+ +V A +
Sbjct: 286 GLVAPLASAAEVPSTAPVSGKKHRPPGPL-FSSSDPLPATSSHSR--DSAQVTSLIPATF 342
Query: 250 TSKALGVHLLKKRSAVIAPISTVAVAHSPLITPAA 354
T+ + + + R AP + A + P +
Sbjct: 343 TAASRDAGMRRTRPGTSAPAAAAAALPPSTLNPTS 377
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 30.3 bits (65), Expect = 4.9
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +1
Query: 85 IAYTAPLAYTAPLIAPLGNYRGPLS----LAPGQPANVLGADGRPLDTLEVNLDRAAHYT 252
I +APL +A A L + PL+ APG P+ L + L A +
Sbjct: 1198 IPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLQPSGASPSASALTLGLATAPSLS 1257
Query: 253 SKALGVH--LLKKRSAVIAPI-STVAVAHSPLITPAAHIAYSAPLA 381
S H LL S+ + + STVA A SP++ PA+ +A P A
Sbjct: 1258 SSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA 1303
>AK126559-1|BAC86594.1| 308|Homo sapiens protein ( Homo sapiens
cDNA FLJ44595 fis, clone BLADE2004849. ).
Length = 308
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 245 CAARSKLTSRVSRGLPSAPRTLAGW 171
C++ S + R RGLPSAP GW
Sbjct: 271 CSSSSAGSRRADRGLPSAPLPTGGW 295
>BC023531-1|AAH23531.1| 775|Homo sapiens chondroitin polymerizing
factor protein.
Length = 775
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 205 PLDTLEVNLDRAAHYTSKALGVHLLKKRSAVIAPISTVAVAHSPLITPAAHIAYSAPLAT 384
P +E LD + G L +R ++ P+S V + P +T A+ + PLA
Sbjct: 457 PARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAA 516
Query: 385 A 387
A
Sbjct: 517 A 517
>BC021223-1|AAH21223.2| 775|Homo sapiens chondroitin polymerizing
factor protein.
Length = 775
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 205 PLDTLEVNLDRAAHYTSKALGVHLLKKRSAVIAPISTVAVAHSPLITPAAHIAYSAPLAT 384
P +E LD + G L +R ++ P+S V + P +T A+ + PLA
Sbjct: 457 PARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAA 516
Query: 385 A 387
A
Sbjct: 517 A 517
>BC008878-1|AAH08878.2| 368|Homo sapiens CHPF protein protein.
Length = 368
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 205 PLDTLEVNLDRAAHYTSKALGVHLLKKRSAVIAPISTVAVAHSPLITPAAHIAYSAPLAT 384
P +E LD + G L +R ++ P+S V + P +T A+ + PLA
Sbjct: 50 PARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAA 109
Query: 385 A 387
A
Sbjct: 110 A 110
>AY358403-1|AAQ88769.1| 775|Homo sapiens RASL651 protein.
Length = 775
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 205 PLDTLEVNLDRAAHYTSKALGVHLLKKRSAVIAPISTVAVAHSPLITPAAHIAYSAPLAT 384
P +E LD + G L +R ++ P+S V + P +T A+ + PLA
Sbjct: 457 PARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAA 516
Query: 385 A 387
A
Sbjct: 517 A 517
>AB095813-1|BAC78393.1| 775|Homo sapiens chondroitin polymerizing
factor protein.
Length = 775
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 205 PLDTLEVNLDRAAHYTSKALGVHLLKKRSAVIAPISTVAVAHSPLITPAAHIAYSAPLAT 384
P +E LD + G L +R ++ P+S V + P +T A+ + PLA
Sbjct: 457 PARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAA 516
Query: 385 A 387
A
Sbjct: 517 A 517
>AB086063-1|BAC81536.1| 775|Homo sapiens chondroitin sulfate
synthase protein.
Length = 775
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 205 PLDTLEVNLDRAAHYTSKALGVHLLKKRSAVIAPISTVAVAHSPLITPAAHIAYSAPLAT 384
P +E LD + G L +R ++ P+S V + P +T A+ + PLA
Sbjct: 457 PARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAA 516
Query: 385 A 387
A
Sbjct: 517 A 517
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,414,068
Number of Sequences: 237096
Number of extensions: 1538934
Number of successful extensions: 5139
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5099
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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