Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4076
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.2  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   3.8  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   3.8  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   3.8  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   3.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.0  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   8.7  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   8.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.7  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 444 GSWSHCDYRSCYSMS 400
           G W H D R CY ++
Sbjct: 491 GKWPHEDKRGCYQLA 505


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 444 GSWSHCDYRSCYSMS 400
           G W H D R CY ++
Sbjct: 581 GKWPHEDKRGCYQLA 595


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 322 RQRVLDGKQLKEQPEPQIVSSES 254
           R+R  D K+ +   EP+I+SS S
Sbjct: 64  RERSRDRKERERSKEPKIISSLS 86


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 322 RQRVLDGKQLKEQPEPQIVSSES 254
           R+R  D K+ +   EP+I+SS S
Sbjct: 64  RERSRDRKERERSKEPKIISSLS 86


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 322 RQRVLDGKQLKEQPEPQIVSSES 254
           R+R  D K+ +   EP+I+SS S
Sbjct: 64  RERSRDRKERERSKEPKIISSLS 86


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 322 RQRVLDGKQLKEQPEPQIVSSES 254
           R+R  D K+ +   EP+I+SS S
Sbjct: 64  RERSRDRKERERSKEPKIISSLS 86


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +3

Query: 183 HTCAYTLCYCTCSCP 227
           H C +  C C  +CP
Sbjct: 748 HCCDFDACDCEMTCP 762


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 462 TRLMRHGSWSHCDYRSCYSMSYKGGSHGVSQNR 364
           TR    G+   CD  S +     GGS+G+  ++
Sbjct: 243 TRTAETGTIRKCDESSPHDQVIIGGSNGLDTSK 275


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -2

Query: 260 RKCSCPRVD*VRTGTCAIAECVSTGV 183
           ++CS  R++  R   C + +C++ G+
Sbjct: 59  QQCSILRINRNRCQYCRLKKCIAVGM 84


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -2

Query: 260 RKCSCPRVD*VRTGTCAIAECVSTGV 183
           ++CS  R++  R   C + +C++ G+
Sbjct: 108 QQCSILRINRNRCQYCRLKKCIAVGM 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.124    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,740
Number of Sequences: 438
Number of extensions: 2915
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)