Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4073
         (761 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013130-1|AAY67799.1| 2014|Homo sapiens leucine-rich repeat kin...    31   5.9  
BC146769-1|AAI46770.1| 1369|Homo sapiens LRRK1 protein protein.        31   5.9  
BC066655-1|AAH66655.1|  439|Homo sapiens LRRK1 protein protein.        31   5.9  
BC005408-1|AAH05408.2|  659|Homo sapiens LRRK1 protein protein.        31   5.9  
AK131075-1|BAC85125.1| 1112|Homo sapiens FLJ00262 protein protein.     31   5.9  
AK026772-1|BAB15547.1|  253|Homo sapiens protein ( Homo sapiens ...    31   5.9  
AB058693-1|BAB47419.1| 1369|Homo sapiens KIAA1790 protein protein.     31   5.9  

>DQ013130-1|AAY67799.1| 2014|Homo sapiens leucine-rich repeat kinase 1
            protein.
          Length = 2014

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 287  HKASPKIFHNFLSSGVHMCSKSSLIAQQLIHIQTETHYCFTVEIVRAAVPDKSIRSPTS 463
            H A+PK+      + V +     L  Q LIH ++ T YC ++    ++ P ++ RSP+S
Sbjct: 1800 HTANPKVPEGDSIADVSIMYSEELGTQILIHQESLTDYC-SMSSYSSSPPRQAARSPSS 1857


>BC146769-1|AAI46770.1| 1369|Homo sapiens LRRK1 protein protein.
          Length = 1369

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 287  HKASPKIFHNFLSSGVHMCSKSSLIAQQLIHIQTETHYCFTVEIVRAAVPDKSIRSPTS 463
            H A+PK+      + V +     L  Q LIH ++ T YC ++    ++ P ++ RSP+S
Sbjct: 1155 HTANPKVPEGDSIADVSIMYSEELGTQILIHQESLTDYC-SMSSYSSSPPRQAARSPSS 1212


>BC066655-1|AAH66655.1|  439|Homo sapiens LRRK1 protein protein.
          Length = 439

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 287 HKASPKIFHNFLSSGVHMCSKSSLIAQQLIHIQTETHYCFTVEIVRAAVPDKSIRSPTS 463
           H A+PK+      + V +     L  Q LIH ++ T YC ++    ++ P ++ RSP+S
Sbjct: 225 HTANPKVPEGDSIADVSIMYSEELGTQILIHQESLTDYC-SMSSYSSSPPRQAARSPSS 282


>BC005408-1|AAH05408.2|  659|Homo sapiens LRRK1 protein protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 287 HKASPKIFHNFLSSGVHMCSKSSLIAQQLIHIQTETHYCFTVEIVRAAVPDKSIRSPTS 463
           H A+PK+      + V +     L  Q LIH ++ T YC ++    ++ P ++ RSP+S
Sbjct: 477 HTANPKVPEGDSIADVSIMYSEELGTQILIHQESLTDYC-SMSSYSSSPPRQAARSPSS 534


>AK131075-1|BAC85125.1| 1112|Homo sapiens FLJ00262 protein protein.
          Length = 1112

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 287  HKASPKIFHNFLSSGVHMCSKSSLIAQQLIHIQTETHYCFTVEIVRAAVPDKSIRSPTS 463
            H A+PK+      + V +     L  Q LIH ++ T YC ++    ++ P ++ RSP+S
Sbjct: 898  HTANPKVPEGDSIADVSIMYSEELGTQILIHQESLTDYC-SMSSYSSSPPRQAARSPSS 955


>AK026772-1|BAB15547.1|  253|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23119 fis, clone LNG07978. ).
          Length = 253

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 287 HKASPKIFHNFLSSGVHMCSKSSLIAQQLIHIQTETHYCFTVEIVRAAVPDKSIRSPTS 463
           H A+PK+      + V +     L  Q LIH ++ T YC ++    ++ P ++ RSP+S
Sbjct: 39  HTANPKVPEGDSIADVSIMYSEELGTQILIHQESLTDYC-SMSSYSSSPPRQAARSPSS 96


>AB058693-1|BAB47419.1| 1369|Homo sapiens KIAA1790 protein protein.
          Length = 1369

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 287  HKASPKIFHNFLSSGVHMCSKSSLIAQQLIHIQTETHYCFTVEIVRAAVPDKSIRSPTS 463
            H A+PK+      + V +     L  Q LIH ++ T YC ++    ++ P ++ RSP+S
Sbjct: 1155 HTANPKVPEGDSIADVSIMYSEELGTQILIHQESLTDYC-SMSSYSSSPPRQAARSPSS 1212


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,038,565
Number of Sequences: 237096
Number of extensions: 1821437
Number of successful extensions: 3168
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3168
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)