Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-4072
         (641 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.8  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   7.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 18  PRWRPLXTSGSPGLQXIRHEXKKISKMNVSKNDKRNRKST 137
           P  RPL  +  P L+ I+ + K+   +    +DK    ST
Sbjct: 843 PSKRPLLGAIVPVLESIQQKAKRSKSLQEVSSDKLQESST 882


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 18   PRWRPLXTSGSPGLQXIRHEXKKISKMNVSKNDKRNRKST 137
            P  RPL  +  P L+ I+ + K+   +    +DK    ST
Sbjct: 881  PSKRPLLGAIVPVLESIQQKAKRSKSLQEVSSDKLQESST 920


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 293 FPRQQAQGFSCYNRKEKGWAL 231
           +PR +A  F C N   +G  L
Sbjct: 111 YPRMRAPSFICENETRQGLTL 131


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 261 LQPKRERLGTRLGDNKIYGIA 199
           +  ++E L  +  DNK+YG+A
Sbjct: 236 MSDQQENLTLKEVDNKVYGMA 256


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,644
Number of Sequences: 438
Number of extensions: 3092
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)