Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-4071
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 34 0.13
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 31 0.89
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 31 0.89
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 31 0.89
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein. 30 2.1
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 29 2.7
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 29 2.7
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 29 2.7
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 28 6.3
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 189 QNIDSPLLYLKPSAPHKNHGDF-ILSLSTPRAENEYEIYDDAPSTTIAPKP-PTLTSWDE 362
+N ++ + + H NH + +S R Y+ Y D P + P+P P T+ +
Sbjct: 186 ENFENYIQRKREENVHGNHVELQAISEMFARPVEVYQ-YSDEPINVLLPRPEPEATALTD 244
Query: 363 SRTDYSHSLSPPAEEPVKSNKP 428
S++ PP+ P++ N P
Sbjct: 245 GSASTSNAAPPPSTVPIQQNPP 266
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 291 YEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPV 413
Y+ + +P+TT +PPT T+ ++ + H L AE P+
Sbjct: 155 YQYHYTSPTTTTTKRPPTTTTTEDPQPFEFHELQEQAENPI 195
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 31.5 bits (68), Expect = 0.67
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Frame = +3
Query: 282 ENEYEIYDDAPSTTIAPKPPTL-TSWDESRTDYSHSLSPPAEEPVKSNKPKFVQIIVPYT 458
E Y+ PSTT + T + DES D+ + PP+ P K P + I +
Sbjct: 83 EGPYQSETTTPSTTTSTAATTTEAAEDESGYDFVNDNGPPSSRPRKPEPPTMPRTIQGFR 142
Query: 459 TLRKEADNDY--PQGTKEWSIISEKEFQPRNIPPHK 560
A + Y P G+ + E R PP +
Sbjct: 143 APPPAATSTYRPPHGSNYDNYGREPASSRRPYPPQQ 178
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 446
TP E +E PST A P + ++ S S S PA EPVK P+ V+ +
Sbjct: 710 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 769
Query: 447 VPYTTL 464
T+
Sbjct: 770 FEKKTV 775
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 446
TP E +E PST A P + ++ S S S PA EPVK P+ V+ +
Sbjct: 640 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 699
Query: 447 VPYTTL 464
T+
Sbjct: 700 FEKKTV 705
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 446
TP E +E PST A P + ++ S S S PA EPVK P+ V+ +
Sbjct: 455 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 514
Query: 447 VPYTTL 464
T+
Sbjct: 515 FEKKTV 520
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 446
TP E +E PST A P + ++ S S S PA EPVK P+ V+ +
Sbjct: 499 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 558
Query: 447 VPYTTL 464
T+
Sbjct: 559 FEKKTV 564
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 446
TP E +E PST A P + ++ S S S PA EPVK P+ V+ +
Sbjct: 640 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 699
Query: 447 VPYTTL 464
T+
Sbjct: 700 FEKKTV 705
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 446
TP E +E PST A P + ++ S S S PA EPVK P+ V+ +
Sbjct: 557 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 616
Query: 447 VPYTTL 464
T+
Sbjct: 617 FEKKTV 622
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical protein
F49E2.5a protein.
Length = 1215
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 270 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 446
TP E +E PST A P + ++ S S S PA EPVK P+ V+ +
Sbjct: 825 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 884
Query: 447 VPYTTL 464
T+
Sbjct: 885 FEKKTV 890
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 493 KALKNGL*YLKKNSNQGIFHPIKKAFLPLPNNILHLQQLQK-IRSRRF*KIT 645
+A +N + + SNQ + P+KK P ++ ++QL++ ++S+ F KIT
Sbjct: 212 QASENEMIIVSDLSNQHVLRPLKKFTSGFPLGVVEMEQLEEDVKSQWFLKIT 263
>Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical
protein T23D8.1 protein.
Length = 568
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 500 SALGVIVVSFFSQSCVWHDYLNKLWFIRFNWLFG 399
SAL V+ FF SC W L WF+ N +G
Sbjct: 310 SALAVVHYFFFMSSCAWWLVLCLAWFLAANLKWG 343
>AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein.
Length = 568
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 500 SALGVIVVSFFSQSCVWHDYLNKLWFIRFNWLFG 399
SAL V+ FF SC W L WF+ N +G
Sbjct: 310 SALAVVHYFFFMSSCAWWLVLCLAWFLAANLKWG 343
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 29.5 bits (63), Expect = 2.7
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Frame = +3
Query: 12 DASFESTGVDVGNDINYDTGMPLEMNKNSFHNSHNKPSFADLRGVKDEDVDKYRTENNLQ 191
DAS S G D + D G P +M +S + AD +D+DVD+ E ++
Sbjct: 582 DASRGSRGKDSKAPSDRD-GSPADMEGDS---PEGQDQDADQDQDQDQDVDEEEEEVIVR 637
Query: 192 NIDSPL-LYLKPSAPHKNH-GDFILSLSTPRAENEYEIYDDAPSTTIAPKPPTLTSWDES 365
+IDSP+ L P H DF PR + PST+ P PP E+
Sbjct: 638 DIDSPVKTLLSPKILSGGHKPDF---PPVPRIQK--------PSTSSQPPPPEPMDTKEN 686
Query: 366 RTD 374
+D
Sbjct: 687 ESD 689
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 29.5 bits (63), Expect = 2.7
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Frame = +3
Query: 12 DASFESTGVDVGNDINYDTGMPLEMNKNSFHNSHNKPSFADLRGVKDEDVDKYRTENNLQ 191
DAS S G D + D G P +M +S + AD +D+DVD+ E ++
Sbjct: 582 DASRGSRGKDSKAPSDRD-GSPADMEGDS---PEGQDQDADQDQDQDQDVDEEEEEVIVR 637
Query: 192 NIDSPL-LYLKPSAPHKNH-GDFILSLSTPRAENEYEIYDDAPSTTIAPKPPTLTSWDES 365
+IDSP+ L P H DF PR + PST+ P PP E+
Sbjct: 638 DIDSPVKTLLSPKILSGGHKPDF---PPVPRIQK--------PSTSSQPPPPEPMDTKEN 686
Query: 366 RTD 374
+D
Sbjct: 687 ESD 689
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 29.5 bits (63), Expect = 2.7
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Frame = +3
Query: 12 DASFESTGVDVGNDINYDTGMPLEMNKNSFHNSHNKPSFADLRGVKDEDVDKYRTENNLQ 191
DAS S G D + D G P +M +S + AD +D+DVD+ E ++
Sbjct: 582 DASRGSRGKDSKAPSDRD-GSPADMEGDS---PEGQDQDADQDQDQDQDVDEEEEEVIVR 637
Query: 192 NIDSPL-LYLKPSAPHKNH-GDFILSLSTPRAENEYEIYDDAPSTTIAPKPPTLTSWDES 365
+IDSP+ L P H DF PR + PST+ P PP E+
Sbjct: 638 DIDSPVKTLLSPKILSGGHKPDF---PPVPRIQK--------PSTSSQPPPPEPMDTKEN 686
Query: 366 RTD 374
+D
Sbjct: 687 ESD 689
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Frame = -3
Query: 485 IVVSFFSQSCVWHD---YLNKLWFIRFNWLFGRWRQTMTVICSTFIPTC--QSRRL--WS 327
I+ +F S ++HD YLN++WF+ + + F + + + F+ SRR+ W+
Sbjct: 20 IITTFLPISSIFHDNFEYLNEIWFLVYFYGFCVYSNILYWLYFEFVERADHSSRRILVWT 79
Query: 326 YS 321
+S
Sbjct: 80 FS 81
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 264 LSTPRAENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPK 431
+S + +N I + PST++A + S +ES ++H++S EP K +
Sbjct: 144 VSQSQPQNGSYIQYNEPSTSVASTTTSFYSPNESEPVFTHAISFKPNEPENGQKAR 199
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 264 LSTPRAENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPK 431
+S + +N I + PST++A + S +ES ++H++S EP K +
Sbjct: 144 VSQSQPQNGSYIQYNEPSTSVASTTTSFYSPNESEPVFTHAISFKPNEPENGQKAR 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,092,837
Number of Sequences: 27780
Number of extensions: 383882
Number of successful extensions: 1322
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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